Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04140 and BWI76_RS04145 are separated by 94 nucleotides BWI76_RS04145 and BWI76_RS04150 are separated by 58 nucleotides
BWI76_RS04140: BWI76_RS04140 - phosphopentomutase, at 851,800 to 853,023
_RS04140
BWI76_RS04145: BWI76_RS04145 - purine-nucleoside phosphorylase, at 853,118 to 853,840
_RS04145
BWI76_RS04150: BWI76_RS04150 - lipoate--protein ligase A, at 853,899 to 854,915
_RS04150
Position (kb) 853
854 Strain fitness (log2 ratio) -2
-1
0
1
2 at 852.195 kb on + strand, within BWI76_RS04140 at 852.378 kb on + strand, within BWI76_RS04140 at 852.585 kb on + strand, within BWI76_RS04140 at 852.856 kb on + strand, within BWI76_RS04140 at 852.866 kb on + strand, within BWI76_RS04140 at 852.948 kb on - strand at 853.171 kb on + strand at 853.670 kb on + strand, within BWI76_RS04145 at 853.696 kb on - strand, within BWI76_RS04145 at 853.751 kb on + strand, within BWI76_RS04145 at 853.789 kb on - strand at 853.815 kb on + strand at 854.125 kb on - strand, within BWI76_RS04150 at 854.125 kb on - strand, within BWI76_RS04150 at 854.264 kb on - strand, within BWI76_RS04150 at 854.274 kb on - strand, within BWI76_RS04150 at 854.379 kb on + strand, within BWI76_RS04150 at 854.386 kb on + strand, within BWI76_RS04150 at 854.387 kb on - strand, within BWI76_RS04150 at 854.505 kb on + strand, within BWI76_RS04150 at 854.513 kb on - strand, within BWI76_RS04150 at 854.670 kb on - strand, within BWI76_RS04150
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 852,195 + BWI76_RS04140 0.32 -0.4 852,378 + BWI76_RS04140 0.47 -0.3 852,585 + BWI76_RS04140 0.64 +0.1 852,856 + BWI76_RS04140 0.86 +1.5 852,866 + BWI76_RS04140 0.87 -1.4 852,948 - +0.5 853,171 + -1.1 853,670 + BWI76_RS04145 0.76 +1.0 853,696 - BWI76_RS04145 0.80 +0.6 853,751 + BWI76_RS04145 0.88 +0.1 853,789 - -1.0 853,815 + +0.7 854,125 - BWI76_RS04150 0.22 +1.0 854,125 - BWI76_RS04150 0.22 +0.1 854,264 - BWI76_RS04150 0.36 -0.6 854,274 - BWI76_RS04150 0.37 -0.0 854,379 + BWI76_RS04150 0.47 -0.6 854,386 + BWI76_RS04150 0.48 -1.1 854,387 - BWI76_RS04150 0.48 -2.2 854,505 + BWI76_RS04150 0.60 +2.1 854,513 - BWI76_RS04150 0.60 -0.8 854,670 - BWI76_RS04150 0.76 +0.9
Or see this region's nucleotide sequence