Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03905 and BWI76_RS03910 overlap by 14 nucleotides BWI76_RS03910 and BWI76_RS03915 overlap by 4 nucleotides BWI76_RS03915 and BWI76_RS03920 are separated by 70 nucleotides BWI76_RS03920 and BWI76_RS03925 are separated by 32 nucleotides
BWI76_RS03905: BWI76_RS03905 - 2-oxo-3-deoxygalactonate kinase, at 807,716 to 808,588
_RS03905
BWI76_RS03910: BWI76_RS03910 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 808,575 to 809,177
_RS03910
BWI76_RS03915: BWI76_RS03915 - MurR/RpiR family transcriptional regulator, at 809,174 to 810,037
_RS03915
BWI76_RS03920: BWI76_RS03920 - N-acetyltransferase, at 810,108 to 810,641
_RS03920
BWI76_RS03925: BWI76_RS03925 - N-acetyltransferase GCN5, at 810,674 to 811,510
_RS03925
Position (kb) 809
810
811 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 808.314 kb on - strand, within BWI76_RS03905 at 808.451 kb on - strand, within BWI76_RS03905 at 808.503 kb on - strand at 808.582 kb on + strand at 808.774 kb on - strand, within BWI76_RS03910 at 808.779 kb on - strand, within BWI76_RS03910 at 809.235 kb on - strand at 809.333 kb on - strand at 809.380 kb on - strand, within BWI76_RS03915 at 809.384 kb on - strand, within BWI76_RS03915 at 809.484 kb on + strand, within BWI76_RS03915 at 809.656 kb on - strand, within BWI76_RS03915 at 809.718 kb on + strand, within BWI76_RS03915 at 809.768 kb on - strand, within BWI76_RS03915 at 809.998 kb on + strand at 810.120 kb on + strand at 810.158 kb on - strand at 810.197 kb on + strand, within BWI76_RS03920 at 810.349 kb on - strand, within BWI76_RS03920 at 810.421 kb on - strand, within BWI76_RS03920 at 810.649 kb on + strand at 810.669 kb on + strand at 810.687 kb on - strand at 810.723 kb on + strand at 810.810 kb on + strand, within BWI76_RS03925 at 811.013 kb on - strand, within BWI76_RS03925
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 808,314 - BWI76_RS03905 0.68 +0.6 808,451 - BWI76_RS03905 0.84 +0.8 808,503 - +0.5 808,582 + -0.9 808,774 - BWI76_RS03910 0.33 -0.2 808,779 - BWI76_RS03910 0.34 -0.3 809,235 - -1.0 809,333 - -0.4 809,380 - BWI76_RS03915 0.24 -4.6 809,384 - BWI76_RS03915 0.24 +0.0 809,484 + BWI76_RS03915 0.36 +0.3 809,656 - BWI76_RS03915 0.56 -0.9 809,718 + BWI76_RS03915 0.63 -3.4 809,768 - BWI76_RS03915 0.69 -0.4 809,998 + +1.1 810,120 + +1.1 810,158 - +0.2 810,197 + BWI76_RS03920 0.17 +0.2 810,349 - BWI76_RS03920 0.45 -0.2 810,421 - BWI76_RS03920 0.59 +0.2 810,649 + +0.3 810,669 + +0.3 810,687 - +0.0 810,723 + +0.3 810,810 + BWI76_RS03925 0.16 +1.2 811,013 - BWI76_RS03925 0.41 -1.4
Or see this region's nucleotide sequence