Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24140

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
5,400,854	+		PFLU_RS24135	0.70	+0.1
5,400,854	+		PFLU_RS24135	0.70	+1.6
5,400,863	+		PFLU_RS24135	0.72	+3.1
5,400,863	+		PFLU_RS24135	0.72	-0.4
5,400,863	+		PFLU_RS24135	0.72	-0.7
5,400,863	+		PFLU_RS24135	0.72	+0.7
5,400,889	+		PFLU_RS24135	0.78	+2.1
5,400,889	+		PFLU_RS24135	0.78	+1.2
5,400,889	+		PFLU_RS24135	0.78	-1.1
5,400,890	-		PFLU_RS24135	0.79	-0.4
5,400,890	-		PFLU_RS24135	0.79	+1.5
5,400,890	-		PFLU_RS24135	0.79	+0.9
5,400,890	-		PFLU_RS24135	0.79	-0.2
5,400,890	-		PFLU_RS24135	0.79	+1.8
5,400,890	-		PFLU_RS24135	0.79	+0.6
5,400,969	+				+1.9
5,401,024	+				-0.2
5,401,024	+				+1.2
5,401,024	+				+0.1
5,401,024	+				+0.4
5,401,024	+				-1.3
5,401,024	+				-2.2
5,401,024	+				+0.7
5,401,024	+				-0.1
5,401,025	-				+1.7
5,401,025	-				-1.4
5,401,025	-				-0.3
5,401,025	-				-1.7
5,401,025	-				+0.9
5,401,025	-				+1.8
5,401,099	+				+1.8
5,401,099	+				+2.8
5,401,100	-				+3.3
5,401,100	-				-0.4
5,401,113	+				-2.8
5,401,114	-				+1.2
5,401,122	+				+2.5
5,401,173	+				-1.7
5,401,271	+				+1.2
5,401,271	+				+1.3
5,401,271	+				+1.6
5,401,271	+				-0.7
5,401,271	+				+0.0
5,401,271	+				-2.1
5,401,271	+				-1.6
5,401,271	+				+1.2
5,401,271	+				+0.7
5,401,272	-				+3.4
5,401,272	-				-0.1
5,401,272	-				-0.8
5,401,272	-				-0.4
5,401,272	-				+0.8
5,401,272	-				-1.1
5,401,272	-				+0.3
5,401,272	-				-0.7
5,401,272	-				+0.6
5,401,354	+				+1.9
5,401,354	+				+0.3
5,401,355	-				-2.0
5,401,355	-				-1.1
5,401,355	-				-0.4
5,401,413	+				-1.1
5,401,414	-				-0.5
5,401,500	+				+0.6
5,401,500	+				+0.5
5,401,501	-				-0.9
5,401,501	-				+1.2
5,401,591	-				+0.4
5,401,632	+				+0.8
5,401,684	-				-0.3
5,401,686	-				+0.1
5,401,686	-				+0.2
5,401,686	-				-0.1
5,401,686	-				+0.5
5,401,761	-				-1.5
5,401,761	-				-1.9
5,401,761	-				-0.4
5,401,804	+				+0.6
5,401,805	-				-0.9
5,401,821	+				-2.8
5,401,822	-				-0.5
5,401,822	-				+1.3
5,401,830	+				+1.6
5,401,831	-				-0.4
5,401,988	+		PFLU_RS24140	0.10	+0.1
5,401,988	+		PFLU_RS24140	0.10	-0.4
5,401,988	+		PFLU_RS24140	0.10	-2.1
5,401,988	+		PFLU_RS24140	0.10	-1.5
5,401,988	+		PFLU_RS24140	0.10	-0.8
5,401,988	+		PFLU_RS24140	0.10	-1.6
5,401,988	+		PFLU_RS24140	0.10	-1.3
5,401,988	+		PFLU_RS24140	0.10	+0.2
5,401,988	+		PFLU_RS24140	0.10	+0.5
5,401,988	+		PFLU_RS24140	0.10	-2.5
5,401,988	+		PFLU_RS24140	0.10	-0.8
5,401,988	+		PFLU_RS24140	0.10	+0.7
5,401,988	+		PFLU_RS24140	0.10	-0.3
5,401,989	-		PFLU_RS24140	0.11	-2.9
5,401,989	-		PFLU_RS24140	0.11	+0.2
5,401,989	-		PFLU_RS24140	0.11	-2.3
5,401,989	-		PFLU_RS24140	0.11	-2.3
5,401,989	-		PFLU_RS24140	0.11	+0.7
5,401,989	-		PFLU_RS24140	0.11	-0.4
5,401,989	-		PFLU_RS24140	0.11	-0.8
5,401,989	-		PFLU_RS24140	0.11	-1.1
5,402,078	+		PFLU_RS24140	0.17	-1.3
5,402,078	+		PFLU_RS24140	0.17	-0.9
5,402,078	+		PFLU_RS24140	0.17	-0.3
5,402,078	+		PFLU_RS24140	0.17	+0.9
5,402,207	+		PFLU_RS24140	0.27	-1.1
5,402,207	+		PFLU_RS24140	0.27	-0.9
5,402,207	+		PFLU_RS24140	0.27	+0.0
5,402,207	+		PFLU_RS24140	0.27	-0.1
5,402,207	+		PFLU_RS24140	0.27	-2.7
5,402,208	-		PFLU_RS24140	0.27	+0.2
5,402,208	-		PFLU_RS24140	0.27	+0.4
5,402,208	-		PFLU_RS24140	0.27	+0.2
5,402,239	+		PFLU_RS24140	0.30	-0.6
5,402,239	+		PFLU_RS24140	0.30	-1.7
5,402,240	-		PFLU_RS24140	0.30	-0.5
5,402,240	-		PFLU_RS24140	0.30	-1.8
5,402,248	+		PFLU_RS24140	0.31	-0.9
5,402,248	+		PFLU_RS24140	0.31	-0.2
5,402,273	+		PFLU_RS24140	0.32	+0.8
5,402,273	+		PFLU_RS24140	0.32	-1.1
5,402,273	+		PFLU_RS24140	0.32	-2.2
5,402,273	+		PFLU_RS24140	0.32	+1.7
5,402,273	+		PFLU_RS24140	0.32	-0.7
5,402,273	+		PFLU_RS24140	0.32	+1.6
5,402,273	+		PFLU_RS24140	0.32	-1.0
5,402,273	+		PFLU_RS24140	0.32	+1.2
5,402,273	+		PFLU_RS24140	0.32	-1.5
5,402,273	+		PFLU_RS24140	0.32	-1.6
5,402,273	+		PFLU_RS24140	0.32	-2.2
5,402,273	+		PFLU_RS24140	0.32	+1.7
5,402,273	+		PFLU_RS24140	0.32	+2.5
5,402,274	-		PFLU_RS24140	0.33	-1.8
5,402,274	-		PFLU_RS24140	0.33	+1.1
5,402,274	-		PFLU_RS24140	0.33	+3.0
5,402,274	-		PFLU_RS24140	0.33	-2.0
5,402,274	-		PFLU_RS24140	0.33	-0.4
5,402,274	-		PFLU_RS24140	0.33	-1.4
5,402,274	-		PFLU_RS24140	0.33	-0.5
5,402,274	-		PFLU_RS24140	0.33	-1.4
5,402,274	-		PFLU_RS24140	0.33	+0.3
5,402,274	-		PFLU_RS24140	0.33	-0.4
5,402,274	-		PFLU_RS24140	0.33	-1.1
5,402,274	-		PFLU_RS24140	0.33	-0.1
5,402,278	+		PFLU_RS24140	0.33	-0.1
5,402,278	+		PFLU_RS24140	0.33	+0.3
5,402,278	+		PFLU_RS24140	0.33	-0.6
5,402,278	+		PFLU_RS24140	0.33	-0.9
5,402,278	+		PFLU_RS24140	0.33	+0.2
5,402,417	+		PFLU_RS24140	0.44	-1.9
5,402,417	+		PFLU_RS24140	0.44	-0.3
5,402,428	+		PFLU_RS24140	0.44	+0.9
5,402,429	-		PFLU_RS24140	0.45	-2.1
5,402,493	-		PFLU_RS24140	0.49	+0.2
5,402,525	+		PFLU_RS24140	0.52	-0.7
5,402,525	+		PFLU_RS24140	0.52	-0.5
5,402,525	+		PFLU_RS24140	0.52	-2.7
5,402,525	+		PFLU_RS24140	0.52	-2.6
5,402,525	+		PFLU_RS24140	0.52	-0.5
5,402,526	-		PFLU_RS24140	0.52	+0.8
5,402,526	-		PFLU_RS24140	0.52	+0.9
5,402,526	-		PFLU_RS24140	0.52	+1.9
5,402,526	-		PFLU_RS24140	0.52	-2.2
5,402,526	-		PFLU_RS24140	0.52	+0.5
5,402,528	+		PFLU_RS24140	0.52	-0.1
5,402,528	+		PFLU_RS24140	0.52	-1.3
5,402,528	+		PFLU_RS24140	0.52	+1.5
5,402,528	+		PFLU_RS24140	0.52	-1.4
5,402,529	-		PFLU_RS24140	0.52	-0.7
5,402,529	-		PFLU_RS24140	0.52	-0.7
5,402,529	-		PFLU_RS24140	0.52	-1.1
5,402,529	-		PFLU_RS24140	0.52	-2.0
5,402,529	-		PFLU_RS24140	0.52	-3.3
5,402,529	-		PFLU_RS24140	0.52	-0.7
5,402,546	+		PFLU_RS24140	0.54	-0.9
5,402,546	+		PFLU_RS24140	0.54	-0.5
5,402,546	+		PFLU_RS24140	0.54	-2.3
5,402,547	-		PFLU_RS24140	0.54	-0.1
5,402,547	-		PFLU_RS24140	0.54	-1.8
5,402,547	-		PFLU_RS24140	0.54	+0.9
5,402,547	-		PFLU_RS24140	0.54	+0.5
5,402,561	+		PFLU_RS24140	0.55	-1.6
5,402,561	+		PFLU_RS24140	0.55	-2.3
5,402,562	-		PFLU_RS24140	0.55	-0.2
5,402,562	-		PFLU_RS24140	0.55	-0.4
5,402,590	+		PFLU_RS24140	0.57	-2.0
5,402,590	+		PFLU_RS24140	0.57	-0.8
5,402,590	+		PFLU_RS24140	0.57	-1.4
5,402,591	-		PFLU_RS24140	0.57	+0.2
5,402,591	-		PFLU_RS24140	0.57	-2.3
5,402,591	-		PFLU_RS24140	0.57	-1.7
5,402,591	-		PFLU_RS24140	0.57	-1.3
5,402,627	+		PFLU_RS24140	0.60	-0.8
5,402,627	+		PFLU_RS24140	0.60	-2.2
5,402,627	+		PFLU_RS24140	0.60	+0.1
5,402,627	+		PFLU_RS24140	0.60	-1.7
5,402,627	+		PFLU_RS24140	0.60	+0.9
5,402,627	+		PFLU_RS24140	0.60	-1.3
5,402,627	+		PFLU_RS24140	0.60	-0.9
5,402,627	+		PFLU_RS24140	0.60	+0.1
5,402,627	+		PFLU_RS24140	0.60	+0.2
5,402,628	-		PFLU_RS24140	0.60	-2.0
5,402,628	-		PFLU_RS24140	0.60	-1.1
5,402,628	-		PFLU_RS24140	0.60	+1.3
5,402,628	-		PFLU_RS24140	0.60	-1.8
5,402,628	-		PFLU_RS24140	0.60	-1.1
5,402,628	-		PFLU_RS24140	0.60	+0.7
5,402,628	-		PFLU_RS24140	0.60	-0.3
5,402,628	-		PFLU_RS24140	0.60	-1.4
5,402,628	-		PFLU_RS24140	0.60	-0.4
5,402,628	-		PFLU_RS24140	0.60	+1.9
5,402,628	-		PFLU_RS24140	0.60	-2.0
5,402,658	+		PFLU_RS24140	0.62	-1.3
5,402,658	+		PFLU_RS24140	0.62	+0.6
5,402,658	+		PFLU_RS24140	0.62	-0.1
5,402,658	+		PFLU_RS24140	0.62	-1.7
5,402,658	+		PFLU_RS24140	0.62	+0.2
5,402,658	+		PFLU_RS24140	0.62	-0.5
5,402,658	+		PFLU_RS24140	0.62	-0.1
5,402,658	+		PFLU_RS24140	0.62	-0.5
5,402,658	+		PFLU_RS24140	0.62	-1.8
5,402,659	-		PFLU_RS24140	0.62	-1.3
5,402,659	-		PFLU_RS24140	0.62	-1.7
5,402,659	-		PFLU_RS24140	0.62	-2.1
5,402,659	-		PFLU_RS24140	0.62	+0.3
5,402,659	-		PFLU_RS24140	0.62	+0.1
5,402,659	-		PFLU_RS24140	0.62	-2.1
5,402,659	-		PFLU_RS24140	0.62	-0.1
5,402,659	-		PFLU_RS24140	0.62	-1.8
5,402,659	-		PFLU_RS24140	0.62	+0.1
5,402,659	-		PFLU_RS24140	0.62	-0.4
5,402,720	+		PFLU_RS24140	0.67	-1.0
5,402,720	+		PFLU_RS24140	0.67	-1.1
5,402,720	+		PFLU_RS24140	0.67	+0.7
5,402,720	+		PFLU_RS24140	0.67	-2.6
5,402,720	+		PFLU_RS24140	0.67	+0.3
5,402,720	+		PFLU_RS24140	0.67	-1.9
5,402,720	+		PFLU_RS24140	0.67	+1.9
5,402,720	+		PFLU_RS24140	0.67	-0.4
5,402,720	+		PFLU_RS24140	0.67	+0.1
5,402,721	-		PFLU_RS24140	0.67	-2.0
5,402,721	-		PFLU_RS24140	0.67	-0.7
5,402,721	-		PFLU_RS24140	0.67	-1.3
5,402,721	-		PFLU_RS24140	0.67	-2.3
5,402,721	-		PFLU_RS24140	0.67	-2.9
5,402,721	-		PFLU_RS24140	0.67	-2.6
5,402,780	+		PFLU_RS24140	0.72	-0.3
5,402,781	-		PFLU_RS24140	0.72	+0.8
5,402,781	-		PFLU_RS24140	0.72	-1.4
5,402,781	-		PFLU_RS24140	0.72	-3.3
5,402,786	+		PFLU_RS24140	0.72	-1.2
5,402,786	+		PFLU_RS24140	0.72	+0.5
5,402,787	-		PFLU_RS24140	0.72	-1.9
5,402,794	-		PFLU_RS24140	0.73	-1.3
5,402,794	-		PFLU_RS24140	0.73	-0.1
5,402,794	-		PFLU_RS24140	0.73	-2.0
5,402,867	+		PFLU_RS24140	0.78	-0.8
5,402,867	+		PFLU_RS24140	0.78	-0.7
5,402,867	+		PFLU_RS24140	0.78	-1.3
5,402,867	+		PFLU_RS24140	0.78	-1.0
5,402,867	+		PFLU_RS24140	0.78	-0.7
5,402,867	+		PFLU_RS24140	0.78	+0.6
5,402,868	-		PFLU_RS24140	0.78	+0.1
5,402,868	-		PFLU_RS24140	0.78	+0.4
5,402,879	+		PFLU_RS24140	0.79	+0.9
5,402,879	+		PFLU_RS24140	0.79	-1.4
5,402,879	+		PFLU_RS24140	0.79	-1.1
5,402,880	-		PFLU_RS24140	0.79	-0.7
5,402,880	-		PFLU_RS24140	0.79	-0.1
5,402,933	+		PFLU_RS24140	0.84	+0.2
5,402,933	+		PFLU_RS24140	0.84	-2.0
5,402,933	+		PFLU_RS24140	0.84	-0.9
5,402,933	+		PFLU_RS24140	0.84	+0.5
5,402,933	+		PFLU_RS24140	0.84	+1.6
5,402,933	+		PFLU_RS24140	0.84	-1.7
5,402,934	-		PFLU_RS24140	0.84	-0.4
5,402,934	-		PFLU_RS24140	0.84	-0.7
5,402,934	-		PFLU_RS24140	0.84	-2.5
5,402,934	-		PFLU_RS24140	0.84	+0.3
5,402,934	-		PFLU_RS24140	0.84	-2.4
5,402,934	-		PFLU_RS24140	0.84	-0.9
5,402,934	-		PFLU_RS24140	0.84	-3.8
5,402,962	+		PFLU_RS24140	0.86	-0.9
5,402,962	+		PFLU_RS24140	0.86	+0.1
5,402,962	+		PFLU_RS24140	0.86	+0.0
5,402,962	+		PFLU_RS24140	0.86	+0.7
5,402,962	+		PFLU_RS24140	0.86	+1.3
5,402,963	-		PFLU_RS24140	0.86	-1.8
5,402,963	-		PFLU_RS24140	0.86	-1.0
5,402,968	+		PFLU_RS24140	0.86	+1.5
5,402,968	+		PFLU_RS24140	0.86	+0.9
5,402,968	+		PFLU_RS24140	0.86	-1.3
5,403,008	+		PFLU_RS24140	0.89	+1.4
5,403,008	+		PFLU_RS24140	0.89	-1.0
5,403,008	+		PFLU_RS24140	0.89	-1.3
5,403,008	+		PFLU_RS24140	0.89	-0.7
5,403,008	+		PFLU_RS24140	0.89	+0.1
5,403,009	-		PFLU_RS24140	0.89	-0.6
5,403,009	-		PFLU_RS24140	0.89	-1.3
5,403,009	-		PFLU_RS24140	0.89	-0.2
5,403,009	-		PFLU_RS24140	0.89	-0.6
5,403,009	-		PFLU_RS24140	0.89	-0.1
5,403,009	-		PFLU_RS24140	0.89	-2.2
5,403,051	+				-0.7
5,403,051	+				-0.7
5,403,051	+				+2.5
5,403,051	+				-1.4
5,403,052	-				-0.8
5,403,052	-				+0.2
5,403,052	-				-1.1
5,403,065	+				-2.0
5,403,065	+				-0.1
5,403,065	+				-0.7
5,403,065	+				-0.6
5,403,065	+				-0.4
5,403,066	-				-0.7
5,403,066	-				-0.9
5,403,066	-				-1.1
5,403,066	-				-0.4
5,403,066	-				-1.4
5,403,066	-				-1.0
5,403,140	-				+0.6
5,403,143	+				-2.7
5,403,144	-				-1.3
5,403,159	+				-0.4
5,403,159	+				+0.3
5,403,159	+				-0.3
5,403,160	-				-0.7
5,403,186	+				-0.4
5,403,186	+				+0.0
5,403,211	-				+1.3
5,403,261	+				-0.7
5,403,307	+				+3.5
5,403,307	+				+0.0
5,403,308	-				+0.8
5,403,327	-				+0.5
5,403,340	-				-1.5
5,403,392	-				-1.1
5,403,439	+		PFLU_RS24145	0.12	-0.4
5,403,489	-		PFLU_RS24145	0.18	+1.8
5,403,609	+		PFLU_RS24145	0.32	-1.9
5,403,609	+		PFLU_RS24145	0.32	+2.2
5,403,609	+		PFLU_RS24145	0.32	+0.9
5,403,609	+		PFLU_RS24145	0.32	-2.5
5,403,722	-		PFLU_RS24145	0.46	+3.1
5,403,982	+		PFLU_RS24145	0.76	+1.6
5,403,983	-		PFLU_RS24145	0.77	+0.5
5,404,012	+		PFLU_RS24145	0.80	-1.4
5,404,013	-		PFLU_RS24145	0.80	-1.1
5,404,013	-		PFLU_RS24145	0.80	-0.9
5,404,013	-		PFLU_RS24145	0.80	+0.9
5,404,013	-		PFLU_RS24145	0.80	+1.9
5,404,034	+		PFLU_RS24145	0.83	-0.2
5,404,110	+				-0.4
5,404,110	+				-1.2
5,404,111	-				-1.7
5,404,111	-				-0.1