Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07760

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
1,728,490	-		PFLU_RS07755	0.33	-3.2
1,728,524	+		PFLU_RS07755	0.36	-2.0
1,728,524	+		PFLU_RS07755	0.36	+1.0
1,728,524	+		PFLU_RS07755	0.36	-0.8
1,728,524	+		PFLU_RS07755	0.36	-0.2
1,728,524	+		PFLU_RS07755	0.36	-1.5
1,728,524	+		PFLU_RS07755	0.36	-1.5
1,728,524	+		PFLU_RS07755	0.36	-2.3
1,728,524	+		PFLU_RS07755	0.36	-0.8
1,728,525	-		PFLU_RS07755	0.36	-1.7
1,728,525	-		PFLU_RS07755	0.36	-0.1
1,728,593	+		PFLU_RS07755	0.41	+1.1
1,728,594	-		PFLU_RS07755	0.41	-0.1
1,729,025	+		PFLU_RS07755	0.73	-0.2
1,729,025	+		PFLU_RS07755	0.73	+1.5
1,729,025	+		PFLU_RS07755	0.73	-0.6
1,729,025	+		PFLU_RS07755	0.73	-0.8
1,729,025	+		PFLU_RS07755	0.73	-1.7
1,729,025	+		PFLU_RS07755	0.73	+0.8
1,729,025	+		PFLU_RS07755	0.73	-1.7
1,729,025	+		PFLU_RS07755	0.73	+1.0
1,729,025	+		PFLU_RS07755	0.73	-2.7
1,729,025	+		PFLU_RS07755	0.73	-0.7
1,729,026	-		PFLU_RS07755	0.73	-2.5
1,729,026	-		PFLU_RS07755	0.73	-2.4
1,729,026	-		PFLU_RS07755	0.73	-0.7
1,729,026	-		PFLU_RS07755	0.73	-1.4
1,729,026	-		PFLU_RS07755	0.73	-2.0
1,729,131	+		PFLU_RS07755	0.81	+1.2
1,729,411	+				-1.8
1,729,411	+				-0.6
1,729,411	+				+1.0
1,729,411	+				+1.3
1,729,411	+				+1.4
1,729,411	+				+0.7
1,729,411	+				-0.3
1,729,411	+				-1.1
1,729,411	+				+0.7
1,729,411	+				-0.5
1,729,411	+				-0.7
1,729,412	-				+1.4
1,729,412	-				+0.2
1,729,412	-				+1.3
1,729,412	-				+0.6
1,729,412	-				+1.2
1,729,412	-				-1.5
1,729,412	-				-1.9
1,729,412	-				-1.2
1,729,412	-				+0.3
1,729,412	-				-1.4
1,729,443	-				-1.0
1,729,443	-				-0.0
1,729,443	-				+1.0
1,729,454	+		PFLU_RS07760	0.10	+2.8
1,729,455	-		PFLU_RS07760	0.10	-1.0
1,729,455	-		PFLU_RS07760	0.10	+0.7
1,729,496	+		PFLU_RS07760	0.16	+1.3
1,729,774	+		PFLU_RS07760	0.57	-1.8
1,729,774	+		PFLU_RS07760	0.57	-1.8
1,729,774	+		PFLU_RS07760	0.57	-1.7
1,729,774	+		PFLU_RS07760	0.57	+1.2
1,729,774	+		PFLU_RS07760	0.57	+0.2
1,729,775	-		PFLU_RS07760	0.57	+0.2
1,729,775	-		PFLU_RS07760	0.57	-1.8
1,729,967	+		PFLU_RS07760	0.85	-1.8
1,729,991	+		PFLU_RS07760	0.89	+0.2
1,729,991	+		PFLU_RS07760	0.89	-1.5
1,729,992	-		PFLU_RS07760	0.89	-2.1
1,729,992	-		PFLU_RS07760	0.89	+0.1
1,730,023	+				-1.7
1,730,023	+				+1.2
1,730,024	-				-2.1
1,730,024	-				-1.4
1,730,024	-				+1.1
1,730,099	+				-0.7
1,730,099	+				+1.2
1,730,099	+				-2.5
1,730,099	+				-2.7
1,730,100	-				+0.5
1,730,100	-				-1.2
1,730,100	-				+1.3
1,730,100	-				+0.9
1,730,100	-				-1.2
1,730,100	-				-0.1
1,730,100	-				-0.6
1,730,100	-				-2.2
1,730,100	-				-0.0
1,730,100	-				-3.2
1,730,101	+				+1.2
1,730,101	+				+1.7
1,730,101	+				+0.4
1,730,101	+				-1.7
1,730,102	-				-3.3
1,730,102	-				+0.0
1,730,102	-				-0.2
1,730,142	+				-0.4
1,730,142	+				-0.2
1,730,142	+				-1.0
1,730,143	-				-1.2
1,730,143	-				+0.8
1,730,143	-				-0.1
1,730,143	-				-2.3
1,730,143	-				+1.1
1,730,147	+				+0.1
1,730,147	+				-0.2
1,730,147	+				+2.1
1,730,147	+				-1.5
1,730,147	+				-1.9
1,730,147	+				-1.9
1,730,147	+				-2.0
1,730,148	-				+1.4
1,730,148	-				-0.4
1,730,148	-				-1.8
1,730,148	-				-1.2
1,730,148	-				-2.0
1,730,148	-				-0.1
1,730,148	-				-2.9
1,730,148	-				+1.7
1,730,148	-				-1.2
1,730,148	-				+1.5
1,730,179	+				+0.9
1,730,179	+				-0.8
1,730,179	+				+1.6
1,730,179	+				-0.8
1,730,179	+				+0.4
1,730,179	+				+1.9
1,730,179	+				+0.9
1,730,180	-				+0.9
1,730,180	-				-1.2
1,730,180	-				+0.3
1,730,180	-				-1.4
1,730,204	+				+1.6
1,730,204	+				-1.0
1,730,205	-				+0.0
1,730,233	-				+1.0
1,730,233	-				-2.7
1,730,233	-				+1.5
1,730,233	-				-0.4
1,730,302	+		PFLU_RS07765	0.16	-0.2
1,730,302	+		PFLU_RS07765	0.16	-0.7
1,730,302	+		PFLU_RS07765	0.16	+1.0
1,730,302	+		PFLU_RS07765	0.16	+0.3
1,730,302	+		PFLU_RS07765	0.16	-0.9
1,730,302	+		PFLU_RS07765	0.16	+1.3
1,730,302	+		PFLU_RS07765	0.16	+2.2
1,730,302	+		PFLU_RS07765	0.16	-2.9
1,730,303	-		PFLU_RS07765	0.16	+0.2
1,730,303	-		PFLU_RS07765	0.16	-0.1
1,730,303	-		PFLU_RS07765	0.16	-0.3
1,730,303	-		PFLU_RS07765	0.16	+2.2
1,730,344	-		PFLU_RS07765	0.24	-1.0
1,730,396	+		PFLU_RS07765	0.34	-1.0
1,730,396	+		PFLU_RS07765	0.34	+2.0
1,730,396	+		PFLU_RS07765	0.34	-1.5
1,730,396	+		PFLU_RS07765	0.34	+0.9
1,730,396	+		PFLU_RS07765	0.34	-0.9
1,730,396	+		PFLU_RS07765	0.34	-0.8
1,730,396	+		PFLU_RS07765	0.34	-0.0
1,730,397	-		PFLU_RS07765	0.34	-0.8
1,730,423	+		PFLU_RS07765	0.39	-1.8
1,730,423	+		PFLU_RS07765	0.39	-3.2
1,730,424	-		PFLU_RS07765	0.40	-3.0
1,730,424	-		PFLU_RS07765	0.40	+0.2
1,730,424	-		PFLU_RS07765	0.40	+1.4
1,730,560	-		PFLU_RS07765	0.66	+1.6
1,730,560	-		PFLU_RS07765	0.66	+3.2
1,730,581	-		PFLU_RS07765	0.70	-0.2
1,730,581	-		PFLU_RS07765	0.70	-2.4
1,730,581	-		PFLU_RS07765	0.70	-0.6
1,730,602	-		PFLU_RS07765	0.74	+0.5
1,730,606	+		PFLU_RS07765	0.75	-0.5
1,730,606	+		PFLU_RS07765	0.75	-0.4
1,730,606	+		PFLU_RS07765	0.75	+1.8
1,730,606	+		PFLU_RS07765	0.75	-2.2
1,730,607	-		PFLU_RS07765	0.75	-1.0
1,730,607	-		PFLU_RS07765	0.75	+0.3
1,730,607	-		PFLU_RS07765	0.75	+0.3
1,730,607	-		PFLU_RS07765	0.75	+1.2
1,730,607	-		PFLU_RS07765	0.75	-0.3
1,730,695	+				-0.7
1,730,695	+				-1.4
1,730,747	-				-3.0
1,730,759	-				+0.1
1,730,768	+				-0.5
1,730,768	+				+1.4
1,730,783	+				+0.7
1,730,783	+				-2.0
1,730,783	+				+0.1
1,730,784	-				+0.8
1,730,784	-				+1.2
1,730,787	+				-1.2
1,730,848	+				+0.3
1,730,848	+				-1.4
1,730,848	+				-1.0
1,730,848	+				-0.2
1,730,848	+				+0.8
1,730,848	+				-0.5
1,730,848	+				+1.4
1,730,848	+				-0.2
1,730,848	+				+1.8
1,730,848	+				-0.2
1,730,848	+				-1.9
1,730,848	+				-0.8
1,730,848	+				-0.2
1,730,848	+				+1.4
1,730,848	+				+2.8
1,730,848	+				+2.0
1,730,848	+				+0.2
1,730,848	+				+1.2
1,730,848	+				-0.2
1,730,848	+				-0.8
1,730,848	+				-1.0
1,730,849	-				+2.5
1,730,849	-				-2.5
1,730,849	-				-1.4
1,730,849	-				+1.5
1,730,849	-				+0.2
1,730,849	-				+0.7
1,730,849	-				-0.2
1,730,849	-				+1.3
1,730,849	-				+0.1
1,730,849	-				+2.9
1,730,849	-				-1.1
1,730,849	-				-0.5
1,730,849	-				+1.8
1,730,849	-				-1.4
1,730,849	-				+1.8
1,730,860	+				+0.7
1,730,860	+				+0.0
1,730,860	+				+0.2
1,730,860	+				+1.8
1,730,860	+				-2.3
1,730,860	+				-0.5
1,730,860	+				-0.9
1,730,860	+				+2.3
1,730,860	+				+1.1
1,730,860	+				-0.2
1,730,860	+				-1.0
1,730,860	+				+2.3
1,730,860	+				-1.2
1,730,860	+				-1.1
1,730,860	+				+2.1
1,730,861	-				-1.0
1,730,861	-				+0.2
1,730,861	-				+2.2
1,730,861	-				+1.4
1,730,861	-				+1.4
1,730,861	-				+0.8
1,730,861	-				+0.2
1,730,861	-				+0.8
1,730,861	-				+1.0
1,730,861	-				-2.3
1,730,861	-				+1.0
1,730,938	+		PFLU_RS07770	0.16	-0.5
1,730,938	+		PFLU_RS07770	0.16	-0.5
1,730,938	+		PFLU_RS07770	0.16	+0.1
1,730,938	+		PFLU_RS07770	0.16	+0.4
1,730,938	+		PFLU_RS07770	0.16	-2.3
1,730,938	+		PFLU_RS07770	0.16	+0.8
1,730,939	-		PFLU_RS07770	0.16	-1.4
1,730,939	-		PFLU_RS07770	0.16	-0.1
1,730,939	-		PFLU_RS07770	0.16	+1.8
1,730,939	-		PFLU_RS07770	0.16	+0.2
1,730,939	-		PFLU_RS07770	0.16	+0.8
1,730,939	-		PFLU_RS07770	0.16	+1.5
1,730,939	-		PFLU_RS07770	0.16	-0.8
1,730,939	-		PFLU_RS07770	0.16	+1.8
1,730,939	-		PFLU_RS07770	0.16	-2.4
1,730,939	-		PFLU_RS07770	0.16	-0.2