Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05610

Experiment: RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
1,174,644	+		BWI76_RS05600	0.83	+0.4
1,174,727	-		BWI76_RS05600	0.87	+0.3
1,174,807	-				-0.4
1,174,825	-				-0.0
1,174,858	+				-0.2
1,174,909	-				-1.7
1,174,913	+				+0.2
1,174,978	-				-1.1
1,175,050	+				+0.1
1,175,050	+				+0.6
1,175,114	-		BWI76_RS05605	0.19	+0.4
1,175,239	+		BWI76_RS05605	0.41	-0.3
1,175,268	-		BWI76_RS05605	0.47	+0.1
1,175,269	+		BWI76_RS05605	0.47	-0.3
1,175,272	+		BWI76_RS05605	0.47	-0.4
1,175,277	-		BWI76_RS05605	0.48	+0.7
1,175,280	-		BWI76_RS05605	0.49	+3.7
1,175,290	+		BWI76_RS05605	0.51	-0.3
1,175,317	+		BWI76_RS05605	0.55	-0.2
1,175,325	-		BWI76_RS05605	0.57	-1.0
1,175,352	+		BWI76_RS05605	0.62	-0.2
1,175,360	-		BWI76_RS05605	0.63	-0.8
1,175,404	-		BWI76_RS05605	0.71	+0.5
1,175,486	+		BWI76_RS05605	0.86	-0.8
1,175,499	+		BWI76_RS05605	0.88	-0.0
1,175,502	-		BWI76_RS05605	0.89	-1.3
1,175,600	+				-0.3
1,175,600	+				+0.8
1,175,603	-				-0.2
1,175,604	+				+0.2
1,175,608	-				+0.9
1,175,608	-				-0.1
1,175,608	-				-2.0
1,175,615	+				-2.6
1,175,618	-				+0.0
1,175,621	+				+0.4
1,175,621	+				-0.7
1,175,623	-				+0.2
1,175,629	+				-0.8
1,175,635	+				+1.0
1,175,637	-				+0.1
1,175,691	-		BWI76_RS05610	0.10	-1.7
1,175,738	-		BWI76_RS05610	0.14	+0.1
1,175,784	-		BWI76_RS05610	0.17	+1.2
1,175,794	-		BWI76_RS05610	0.18	-0.6
1,175,840	+		BWI76_RS05610	0.22	-0.4
1,175,840	+		BWI76_RS05610	0.22	+1.4
1,175,840	+		BWI76_RS05610	0.22	-2.5
1,175,840	+		BWI76_RS05610	0.22	+0.8
1,175,845	+		BWI76_RS05610	0.22	-0.3
1,175,848	-		BWI76_RS05610	0.22	+0.1
1,175,848	-		BWI76_RS05610	0.22	-0.4
1,175,848	-		BWI76_RS05610	0.22	+0.2
1,175,848	-		BWI76_RS05610	0.22	+0.2
1,175,850	+		BWI76_RS05610	0.23	-0.6
1,175,858	-		BWI76_RS05610	0.23	+0.4
1,175,859	-		BWI76_RS05610	0.23	-0.4
1,175,916	+		BWI76_RS05610	0.28	-0.2
1,175,936	+		BWI76_RS05610	0.29	+1.4
1,175,944	-		BWI76_RS05610	0.30	+0.5
1,176,023	+		BWI76_RS05610	0.36	-0.1
1,176,033	+		BWI76_RS05610	0.37	-0.7
1,176,096	-				+0.8
1,176,137	-		BWI76_RS05610	0.45	-0.4
1,176,144	+		BWI76_RS05610	0.45	-1.5
1,176,144	+		BWI76_RS05610	0.45	+0.3
1,176,156	+		BWI76_RS05610	0.46	+0.5
1,176,267	+		BWI76_RS05610	0.55	+0.6
1,176,361	-		BWI76_RS05610	0.62	-0.4
1,176,709	-		BWI76_RS05610	0.89	+0.6
1,176,773	+				+1.0
1,176,773	+				+0.8
1,176,781	-				-0.2
1,176,805	-				-0.4
1,176,811	+				+0.1
1,176,913	+				+1.2
1,176,914	-				+0.5
1,177,080	+		BWI76_RS05615	0.17	-0.3
1,177,080	-		BWI76_RS05615	0.17	+0.2
1,177,088	-		BWI76_RS05615	0.18	-1.5
1,177,088	-		BWI76_RS05615	0.18	+0.5
1,177,118	-		BWI76_RS05615	0.20	-0.3
1,177,118	-		BWI76_RS05615	0.20	-1.7
1,177,211	+		BWI76_RS05615	0.27	+0.0
1,177,216	+		BWI76_RS05615	0.27	-0.4
1,177,226	+		BWI76_RS05615	0.28	+0.2
1,177,253	-		BWI76_RS05615	0.30	-1.0
1,177,253	-		BWI76_RS05615	0.30	-0.6
1,177,306	+		BWI76_RS05615	0.33	+0.2
1,177,306	+		BWI76_RS05615	0.33	+0.0
1,177,306	+		BWI76_RS05615	0.33	+0.3
1,177,314	-		BWI76_RS05615	0.34	+0.3
1,177,327	+		BWI76_RS05615	0.35	+0.2
1,177,327	+		BWI76_RS05615	0.35	-0.6
1,177,327	+		BWI76_RS05615	0.35	-1.3
1,177,327	+		BWI76_RS05615	0.35	+0.2
1,177,327	+		BWI76_RS05615	0.35	-0.2
1,177,327	+		BWI76_RS05615	0.35	+0.0
1,177,335	-		BWI76_RS05615	0.36	-0.0
1,177,335	-		BWI76_RS05615	0.36	-0.4
1,177,335	-		BWI76_RS05615	0.36	-1.2
1,177,415	-		BWI76_RS05615	0.41	-0.1
1,177,417	-		BWI76_RS05615	0.41	-0.0
1,177,417	-		BWI76_RS05615	0.41	-0.2
1,177,483	+		BWI76_RS05615	0.46	+0.7
1,177,513	+		BWI76_RS05615	0.48	-1.5
1,177,534	-		BWI76_RS05615	0.50	-1.7
1,177,539	-		BWI76_RS05615	0.50	-0.3
1,177,602	+		BWI76_RS05615	0.55	+0.0
1,177,602	+		BWI76_RS05615	0.55	+0.2
1,177,610	-		BWI76_RS05615	0.55	-0.2
1,177,610	-		BWI76_RS05615	0.55	+0.7
1,177,626	+		BWI76_RS05615	0.56	+3.6
1,177,671	+		BWI76_RS05615	0.59	-0.3
1,177,686	-		BWI76_RS05615	0.61	+0.6
1,177,689	-		BWI76_RS05615	0.61	+0.7
1,177,691	+		BWI76_RS05615	0.61	+0.4
1,177,699	-		BWI76_RS05615	0.61	+0.6
1,177,701	+		BWI76_RS05615	0.62	-0.9
1,177,709	-		BWI76_RS05615	0.62	-0.8
1,177,716	-		BWI76_RS05615	0.63	+0.0
1,177,738	+		BWI76_RS05615	0.64	-0.9
1,177,739	+		BWI76_RS05615	0.64	+0.1
1,177,746	+		BWI76_RS05615	0.65	+2.2
1,177,746	+		BWI76_RS05615	0.65	-0.2
1,177,746	-		BWI76_RS05615	0.65	+0.7
1,177,747	+		BWI76_RS05615	0.65	+0.2
1,177,747	+		BWI76_RS05615	0.65	-0.0
1,177,747	+		BWI76_RS05615	0.65	-0.2
1,177,747	+		BWI76_RS05615	0.65	-0.7
1,177,747	+		BWI76_RS05615	0.65	-0.7
1,177,747	+		BWI76_RS05615	0.65	+0.0
1,177,747	+		BWI76_RS05615	0.65	-1.6
1,177,747	+		BWI76_RS05615	0.65	+0.2
1,177,754	-		BWI76_RS05615	0.65	-0.4
1,177,754	-		BWI76_RS05615	0.65	+0.6
1,177,754	-		BWI76_RS05615	0.65	+0.5
1,177,754	-		BWI76_RS05615	0.65	-2.7
1,177,756	+		BWI76_RS05615	0.66	-2.6
1,177,764	-		BWI76_RS05615	0.66	-2.0
1,177,783	+		BWI76_RS05615	0.67	-1.5
1,177,790	+		BWI76_RS05615	0.68	-1.5
1,177,790	+		BWI76_RS05615	0.68	+0.8
1,177,790	+		BWI76_RS05615	0.68	+0.8
1,177,791	-				-1.2
1,177,791	-				-2.5
1,177,791	-		BWI76_RS05615	0.68	-2.6
1,177,792	+		BWI76_RS05615	0.68	-1.2
1,177,840	-		BWI76_RS05615	0.72	-1.9
1,177,840	-		BWI76_RS05615	0.72	-0.2
1,177,840	-		BWI76_RS05615	0.72	-1.2