Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS03450

Experiment: RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS03445 and BWI76_RS03450 are separated by 566 nucleotidesBWI76_RS03450 and BWI76_RS03455 are separated by 41 nucleotides BWI76_RS03445: BWI76_RS03445 - hypothetical protein, at 709,143 to 710,792 _RS03445 BWI76_RS03450: BWI76_RS03450 - MFS transporter, at 711,359 to 712,723 _RS03450 BWI76_RS03455: BWI76_RS03455 - porin, at 712,765 to 714,108 _RS03455 Position (kb) 711 712 713Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 710.389 kb on + strand, within BWI76_RS03445at 710.447 kb on - strand, within BWI76_RS03445at 710.616 kb on + strand, within BWI76_RS03445at 710.621 kb on + strand, within BWI76_RS03445at 710.627 kb on + strand, within BWI76_RS03445at 710.667 kb on - strandat 710.806 kb on + strandat 710.857 kb on - strandat 711.058 kb on - strandat 711.302 kb on + strandat 711.388 kb on - strandat 711.439 kb on + strandat 711.461 kb on - strandat 711.884 kb on + strand, within BWI76_RS03450at 712.128 kb on - strand, within BWI76_RS03450at 712.170 kb on - strand, within BWI76_RS03450at 712.178 kb on + strand, within BWI76_RS03450at 712.186 kb on - strand, within BWI76_RS03450at 712.196 kb on - strand, within BWI76_RS03450at 712.220 kb on + strand, within BWI76_RS03450at 712.436 kb on + strand, within BWI76_RS03450at 712.449 kb on - strand, within BWI76_RS03450at 712.468 kb on - strand, within BWI76_RS03450at 712.499 kb on - strand, within BWI76_RS03450at 712.506 kb on + strand, within BWI76_RS03450at 712.529 kb on - strand, within BWI76_RS03450at 712.539 kb on + strand, within BWI76_RS03450at 712.633 kb on + strandat 712.710 kb on - strandat 712.762 kb on - strandat 712.763 kb on + strandat 712.763 kb on + strandat 713.035 kb on - strand, within BWI76_RS03455at 713.093 kb on + strand, within BWI76_RS03455at 713.114 kb on - strand, within BWI76_RS03455at 713.153 kb on - strand, within BWI76_RS03455at 713.175 kb on + strandat 713.180 kb on + strand, within BWI76_RS03455at 713.180 kb on + strand, within BWI76_RS03455at 713.180 kb on + strand, within BWI76_RS03455at 713.183 kb on - strand, within BWI76_RS03455at 713.188 kb on - strand, within BWI76_RS03455at 713.188 kb on - strand, within BWI76_RS03455at 713.188 kb on - strand, within BWI76_RS03455at 713.188 kb on - strand, within BWI76_RS03455at 713.193 kb on - strand, within BWI76_RS03455at 713.209 kb on - strand, within BWI76_RS03455at 713.232 kb on - strand, within BWI76_RS03455at 713.232 kb on - strand, within BWI76_RS03455at 713.237 kb on - strand, within BWI76_RS03455at 713.242 kb on + strand, within BWI76_RS03455at 713.286 kb on + strand, within BWI76_RS03455at 713.293 kb on - strand, within BWI76_RS03455at 713.301 kb on + strand, within BWI76_RS03455at 713.312 kb on + strand, within BWI76_RS03455at 713.312 kb on + strand, within BWI76_RS03455at 713.312 kb on + strand, within BWI76_RS03455at 713.312 kb on + strand, within BWI76_RS03455at 713.312 kb on + strand, within BWI76_RS03455at 713.312 kb on + strand, within BWI76_RS03455at 713.317 kb on - strand, within BWI76_RS03455at 713.319 kb on - strand, within BWI76_RS03455at 713.320 kb on - strand, within BWI76_RS03455at 713.320 kb on - strand, within BWI76_RS03455at 713.320 kb on - strand, within BWI76_RS03455at 713.320 kb on - strand, within BWI76_RS03455at 713.320 kb on - strand, within BWI76_RS03455at 713.320 kb on - strand, within BWI76_RS03455at 713.320 kb on - strand, within BWI76_RS03455at 713.320 kb on - strand, within BWI76_RS03455at 713.342 kb on + strand, within BWI76_RS03455at 713.349 kb on + strand, within BWI76_RS03455at 713.349 kb on + strand, within BWI76_RS03455at 713.367 kb on + strand, within BWI76_RS03455at 713.367 kb on + strand, within BWI76_RS03455at 713.367 kb on + strand, within BWI76_RS03455at 713.367 kb on + strand, within BWI76_RS03455at 713.375 kb on - strand, within BWI76_RS03455at 713.375 kb on - strand, within BWI76_RS03455at 713.375 kb on - strand, within BWI76_RS03455at 713.375 kb on - strand, within BWI76_RS03455at 713.375 kb on - strand, within BWI76_RS03455at 713.392 kb on + strand, within BWI76_RS03455at 713.397 kb on + strand, within BWI76_RS03455at 713.400 kb on - strand, within BWI76_RS03455at 713.404 kb on + strand, within BWI76_RS03455at 713.405 kb on - strand, within BWI76_RS03455at 713.410 kb on - strand, within BWI76_RS03455at 713.416 kb on - strand, within BWI76_RS03455at 713.422 kb on - strand, within BWI76_RS03455at 713.439 kb on + strand, within BWI76_RS03455at 713.447 kb on - strand, within BWI76_RS03455at 713.491 kb on - strand, within BWI76_RS03455at 713.533 kb on - strand, within BWI76_RS03455at 713.547 kb on + strand, within BWI76_RS03455at 713.547 kb on + strand, within BWI76_RS03455at 713.555 kb on - strand, within BWI76_RS03455at 713.555 kb on - strand, within BWI76_RS03455at 713.555 kb on - strand, within BWI76_RS03455at 713.650 kb on + strand, within BWI76_RS03455at 713.656 kb on + strand, within BWI76_RS03455at 713.664 kb on + strand, within BWI76_RS03455at 713.667 kb on + strand, within BWI76_RS03455at 713.681 kb on + strand, within BWI76_RS03455at 713.694 kb on + strand, within BWI76_RS03455at 713.701 kb on - strand, within BWI76_RS03455

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
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710,389 + BWI76_RS03445 0.76 +0.6
710,447 - BWI76_RS03445 0.79 +0.6
710,616 + BWI76_RS03445 0.89 -0.1
710,621 + BWI76_RS03445 0.90 +0.7
710,627 + BWI76_RS03445 0.90 +0.1
710,667 - -1.4
710,806 + -0.3
710,857 - +0.8
711,058 - +0.4
711,302 + -0.4
711,388 - -3.0
711,439 + +0.4
711,461 - +0.7
711,884 + BWI76_RS03450 0.38 +0.4
712,128 - BWI76_RS03450 0.56 -0.8
712,170 - BWI76_RS03450 0.59 +0.7
712,178 + BWI76_RS03450 0.60 +1.5
712,186 - BWI76_RS03450 0.61 +0.5
712,196 - BWI76_RS03450 0.61 +0.3
712,220 + BWI76_RS03450 0.63 -3.0
712,436 + BWI76_RS03450 0.79 +0.8
712,449 - BWI76_RS03450 0.80 +1.0
712,468 - BWI76_RS03450 0.81 -0.2
712,499 - BWI76_RS03450 0.84 +0.6
712,506 + BWI76_RS03450 0.84 +0.6
712,529 - BWI76_RS03450 0.86 -1.6
712,539 + BWI76_RS03450 0.86 +0.9
712,633 + +0.1
712,710 - +0.0
712,762 - +0.1
712,763 + -1.9
712,763 + -0.8
713,035 - BWI76_RS03455 0.20 -0.6
713,093 + BWI76_RS03455 0.24 +0.2
713,114 - BWI76_RS03455 0.26 -0.8
713,153 - BWI76_RS03455 0.29 -0.7
713,175 + +2.3
713,180 + BWI76_RS03455 0.31 -0.0
713,180 + BWI76_RS03455 0.31 -0.6
713,180 + BWI76_RS03455 0.31 +1.2
713,183 - BWI76_RS03455 0.31 +0.5
713,188 - BWI76_RS03455 0.31 -2.0
713,188 - BWI76_RS03455 0.31 -0.4
713,188 - BWI76_RS03455 0.31 -0.1
713,188 - BWI76_RS03455 0.31 +0.3
713,193 - BWI76_RS03455 0.32 +0.0
713,209 - BWI76_RS03455 0.33 +0.5
713,232 - BWI76_RS03455 0.35 -1.2
713,232 - BWI76_RS03455 0.35 -0.4
713,237 - BWI76_RS03455 0.35 +0.8
713,242 + BWI76_RS03455 0.35 +0.5
713,286 + BWI76_RS03455 0.39 +0.8
713,293 - BWI76_RS03455 0.39 +1.2
713,301 + BWI76_RS03455 0.40 +0.4
713,312 + BWI76_RS03455 0.41 -1.0
713,312 + BWI76_RS03455 0.41 +0.8
713,312 + BWI76_RS03455 0.41 +0.3
713,312 + BWI76_RS03455 0.41 -0.5
713,312 + BWI76_RS03455 0.41 -2.5
713,312 + BWI76_RS03455 0.41 -0.3
713,317 - BWI76_RS03455 0.41 +0.5
713,319 - BWI76_RS03455 0.41 -0.3
713,320 - BWI76_RS03455 0.41 +1.1
713,320 - BWI76_RS03455 0.41 +0.6
713,320 - BWI76_RS03455 0.41 -0.4
713,320 - BWI76_RS03455 0.41 +0.4
713,320 - BWI76_RS03455 0.41 +0.4
713,320 - BWI76_RS03455 0.41 +0.7
713,320 - BWI76_RS03455 0.41 +0.1
713,320 - BWI76_RS03455 0.41 -1.9
713,342 + BWI76_RS03455 0.43 -0.5
713,349 + BWI76_RS03455 0.43 -2.2
713,349 + BWI76_RS03455 0.43 -1.6
713,367 + BWI76_RS03455 0.45 +0.5
713,367 + BWI76_RS03455 0.45 +0.4
713,367 + BWI76_RS03455 0.45 +0.0
713,367 + BWI76_RS03455 0.45 -0.0
713,375 - BWI76_RS03455 0.45 -1.5
713,375 - BWI76_RS03455 0.45 +0.4
713,375 - BWI76_RS03455 0.45 -0.8
713,375 - BWI76_RS03455 0.45 +1.2
713,375 - BWI76_RS03455 0.45 +0.5
713,392 + BWI76_RS03455 0.47 +2.5
713,397 + BWI76_RS03455 0.47 +0.5
713,400 - BWI76_RS03455 0.47 -3.0
713,404 + BWI76_RS03455 0.48 -0.5
713,405 - BWI76_RS03455 0.48 -1.0
713,410 - BWI76_RS03455 0.48 -0.1
713,416 - BWI76_RS03455 0.48 +0.2
713,422 - BWI76_RS03455 0.49 -0.0
713,439 + BWI76_RS03455 0.50 -1.6
713,447 - BWI76_RS03455 0.51 +0.3
713,491 - BWI76_RS03455 0.54 +0.2
713,533 - BWI76_RS03455 0.57 -0.2
713,547 + BWI76_RS03455 0.58 -0.2
713,547 + BWI76_RS03455 0.58 -0.1
713,555 - BWI76_RS03455 0.59 -0.9
713,555 - BWI76_RS03455 0.59 +0.4
713,555 - BWI76_RS03455 0.59 +2.3
713,650 + BWI76_RS03455 0.66 -0.8
713,656 + BWI76_RS03455 0.66 +0.4
713,664 + BWI76_RS03455 0.67 -1.0
713,667 + BWI76_RS03455 0.67 +1.4
713,681 + BWI76_RS03455 0.68 -0.1
713,694 + BWI76_RS03455 0.69 +0.3
713,701 - BWI76_RS03455 0.70 -1.5

Or see this region's nucleotide sequence