Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22860

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
5,143,679	+				-1.5
5,143,679	+				+1.1
5,143,679	+				-2.1
5,143,679	+				+1.5
5,143,679	+				-0.8
5,143,679	+				-0.9
5,143,679	+				-0.7
5,143,679	+				+1.3
5,143,679	+				-2.5
5,143,679	+				-2.0
5,143,679	+				-0.6
5,143,679	+				+0.1
5,143,680	-				+0.7
5,143,680	-				-0.5
5,143,680	-				-0.3
5,143,680	-				-0.1
5,143,680	-				-1.8
5,143,680	-				-0.3
5,143,680	-				-0.4
5,143,712	-				+1.6
5,143,712	-				-1.2
5,143,712	-				+1.5
5,143,712	-				+0.2
5,143,712	-				-0.0
5,143,712	-				+0.9
5,143,757	+				-1.3
5,143,757	+				+1.0
5,143,757	+				-1.6
5,143,757	+				-0.1
5,143,757	+				+1.1
5,143,758	-				-0.8
5,143,758	-				-0.3
5,143,772	+				+0.8
5,143,840	+				-1.0
5,143,840	+				-0.0
5,143,840	+				-0.0
5,143,840	+				+0.4
5,143,840	+				+1.4
5,143,840	+				+0.1
5,143,840	+				+3.6
5,143,840	+				-0.2
5,143,878	+				-0.2
5,143,878	+				-1.4
5,143,878	+				-2.2
5,143,986	+		PFLU_RS22855	0.14	-0.2
5,143,986	+		PFLU_RS22855	0.14	-0.1
5,143,987	-		PFLU_RS22855	0.14	-3.4
5,143,987	-		PFLU_RS22855	0.14	-2.8
5,143,987	-		PFLU_RS22855	0.14	-0.9
5,143,987	-		PFLU_RS22855	0.14	-0.6
5,143,987	-		PFLU_RS22855	0.14	-1.3
5,143,997	+		PFLU_RS22855	0.15	-0.8
5,143,997	+		PFLU_RS22855	0.15	-0.6
5,143,997	+		PFLU_RS22855	0.15	+0.5
5,143,998	-		PFLU_RS22855	0.15	+0.2
5,144,055	+		PFLU_RS22855	0.22	+0.4
5,144,055	+		PFLU_RS22855	0.22	+1.6
5,144,055	+		PFLU_RS22855	0.22	-2.8
5,144,055	+		PFLU_RS22855	0.22	+2.7
5,144,056	-		PFLU_RS22855	0.22	+1.2
5,144,056	-		PFLU_RS22855	0.22	+1.0
5,144,056	-		PFLU_RS22855	0.22	+0.8
5,144,056	-		PFLU_RS22855	0.22	-0.8
5,144,121	+		PFLU_RS22855	0.30	+1.4
5,144,121	+		PFLU_RS22855	0.30	+1.1
5,144,121	+		PFLU_RS22855	0.30	-2.6
5,144,121	+		PFLU_RS22855	0.30	+1.1
5,144,122	-		PFLU_RS22855	0.30	+0.0
5,144,122	-		PFLU_RS22855	0.30	-0.0
5,144,127	+		PFLU_RS22855	0.31	+0.3
5,144,127	+		PFLU_RS22855	0.31	+1.3
5,144,139	+		PFLU_RS22855	0.33	-2.1
5,144,139	+		PFLU_RS22855	0.33	+0.9
5,144,139	+		PFLU_RS22855	0.33	-1.8
5,144,139	+		PFLU_RS22855	0.33	+1.4
5,144,139	+		PFLU_RS22855	0.33	+1.8
5,144,140	-		PFLU_RS22855	0.33	+0.4
5,144,140	-		PFLU_RS22855	0.33	+0.4
5,144,140	-		PFLU_RS22855	0.33	+1.6
5,144,140	-		PFLU_RS22855	0.33	+0.7
5,144,265	+		PFLU_RS22855	0.48	+1.5
5,144,265	+		PFLU_RS22855	0.48	+0.2
5,144,266	-		PFLU_RS22855	0.48	-1.2
5,144,266	-		PFLU_RS22855	0.48	-1.9
5,144,266	-		PFLU_RS22855	0.48	+1.2
5,144,266	-		PFLU_RS22855	0.48	+1.7
5,144,281	+		PFLU_RS22855	0.50	-1.3
5,144,282	-		PFLU_RS22855	0.50	+2.7
5,144,282	-		PFLU_RS22855	0.50	-0.4
5,144,282	-		PFLU_RS22855	0.50	-3.1
5,144,282	-		PFLU_RS22855	0.50	+1.2
5,144,614	-				-1.1
5,144,614	-				+1.7
5,144,643	+				-0.2
5,144,644	-				-1.2
5,144,649	+				-0.4
5,144,649	+				+0.9
5,144,649	+				+0.3
5,144,649	+				-1.7
5,144,649	+				-2.3
5,144,649	+				-1.0
5,144,649	+				+1.2
5,144,649	+				-0.9
5,144,649	+				-0.3
5,144,649	+				-0.1
5,144,649	+				-0.0
5,144,650	-				-0.8
5,144,650	-				+0.9
5,144,650	-				-0.2
5,144,650	-				+0.6
5,144,650	-				-1.2
5,144,650	-				-1.5
5,144,650	-				-0.5
5,144,650	-				-1.1
5,144,650	-				-0.9
5,144,693	+				-1.9
5,144,693	+				-0.0
5,144,694	-				+0.1
5,144,694	-				-0.8
5,144,702	+				+0.8
5,144,702	+				-0.7
5,144,702	+				+1.8
5,144,702	+				-0.3
5,144,702	+				-1.5
5,144,702	+				+0.9
5,144,702	+				-2.7
5,144,702	+				-2.3
5,144,702	+				-0.2
5,144,702	+				+2.0
5,144,702	+				+0.4
5,144,702	+				-1.4
5,144,702	+				+1.2
5,144,702	+				-0.2
5,144,702	+				-1.9
5,144,702	+				+1.4
5,144,703	-				+1.2
5,144,703	-				+0.4
5,144,703	-				-0.6
5,144,703	-				-0.3
5,144,703	-				-0.8
5,144,703	-				-0.6
5,144,703	-				-0.3
5,144,703	-				-2.5
5,144,703	-				-1.5
5,144,703	-				-2.0
5,144,703	-				-0.5
5,144,703	-				-0.1
5,144,703	-				-1.0
5,144,703	-				+0.7
5,144,703	-				-1.0
5,144,703	-				-0.3
5,144,703	-				+0.4
5,144,703	-				+0.2
5,144,703	-				+0.7
5,144,703	-				+1.6
5,144,703	-				-2.4
5,144,737	-				-1.9
5,144,791	-		PFLU_RS22860	0.12	-0.3
5,144,791	-		PFLU_RS22860	0.12	+0.1
5,144,966	+		PFLU_RS22860	0.30	-1.6
5,144,967	-		PFLU_RS22860	0.30	-1.4
5,144,967	-		PFLU_RS22860	0.30	-0.8
5,144,978	+		PFLU_RS22860	0.32	-1.2
5,144,978	+		PFLU_RS22860	0.32	-1.1
5,144,978	+		PFLU_RS22860	0.32	-0.9
5,144,978	+		PFLU_RS22860	0.32	-2.6
5,144,978	+		PFLU_RS22860	0.32	-1.6
5,144,978	+		PFLU_RS22860	0.32	+1.0
5,144,978	+		PFLU_RS22860	0.32	-1.0
5,144,978	+		PFLU_RS22860	0.32	-0.3
5,144,978	+		PFLU_RS22860	0.32	-1.6
5,144,978	+		PFLU_RS22860	0.32	-0.8
5,144,978	+		PFLU_RS22860	0.32	-0.5
5,144,978	+		PFLU_RS22860	0.32	-1.8
5,144,978	+		PFLU_RS22860	0.32	-0.0
5,144,978	+		PFLU_RS22860	0.32	-0.3
5,144,978	+		PFLU_RS22860	0.32	+2.0
5,144,978	+		PFLU_RS22860	0.32	+0.4
5,144,979	-		PFLU_RS22860	0.32	-1.0
5,144,979	-		PFLU_RS22860	0.32	+0.3
5,144,979	-		PFLU_RS22860	0.32	-0.8
5,144,979	-		PFLU_RS22860	0.32	-0.7
5,144,979	-		PFLU_RS22860	0.32	-0.6
5,145,023	+		PFLU_RS22860	0.36	-0.2
5,145,023	+		PFLU_RS22860	0.36	-0.2
5,145,023	+		PFLU_RS22860	0.36	+0.6
5,145,023	+		PFLU_RS22860	0.36	-0.8
5,145,023	+		PFLU_RS22860	0.36	-0.0
5,145,023	+		PFLU_RS22860	0.36	+1.4
5,145,023	+		PFLU_RS22860	0.36	-0.0
5,145,023	+		PFLU_RS22860	0.36	-1.4
5,145,023	+		PFLU_RS22860	0.36	-1.3
5,145,023	+		PFLU_RS22860	0.36	+0.2
5,145,023	+		PFLU_RS22860	0.36	-0.2
5,145,023	+		PFLU_RS22860	0.36	+0.1
5,145,023	+		PFLU_RS22860	0.36	-1.2
5,145,023	+		PFLU_RS22860	0.36	+1.2
5,145,024	-		PFLU_RS22860	0.36	-2.3
5,145,024	-		PFLU_RS22860	0.36	-1.8
5,145,024	-		PFLU_RS22860	0.36	-2.2
5,145,024	-		PFLU_RS22860	0.36	-2.3
5,145,024	-		PFLU_RS22860	0.36	-2.0
5,145,024	-		PFLU_RS22860	0.36	+0.4
5,145,024	-		PFLU_RS22860	0.36	-0.4
5,145,024	-		PFLU_RS22860	0.36	+1.4
5,145,026	+		PFLU_RS22860	0.37	-0.5
5,145,026	+		PFLU_RS22860	0.37	+0.1
5,145,026	+		PFLU_RS22860	0.37	-2.9
5,145,026	+		PFLU_RS22860	0.37	-0.2
5,145,026	+		PFLU_RS22860	0.37	-1.5
5,145,026	+		PFLU_RS22860	0.37	-0.2
5,145,026	+		PFLU_RS22860	0.37	+2.0
5,145,026	+		PFLU_RS22860	0.37	+1.5
5,145,026	+		PFLU_RS22860	0.37	-0.9
5,145,026	+		PFLU_RS22860	0.37	-1.5
5,145,026	+		PFLU_RS22860	0.37	-0.2
5,145,026	+		PFLU_RS22860	0.37	-1.4
5,145,026	+		PFLU_RS22860	0.37	+1.8
5,145,027	-		PFLU_RS22860	0.37	-2.4
5,145,027	-		PFLU_RS22860	0.37	+1.2
5,145,027	-		PFLU_RS22860	0.37	-2.4
5,145,027	-		PFLU_RS22860	0.37	+3.3
5,145,027	-		PFLU_RS22860	0.37	-1.2
5,145,027	-		PFLU_RS22860	0.37	-0.3
5,145,027	-		PFLU_RS22860	0.37	-0.7
5,145,027	-		PFLU_RS22860	0.37	-1.0
5,145,081	-		PFLU_RS22860	0.42	+0.6
5,145,123	+		PFLU_RS22860	0.47	+1.0
5,145,123	+		PFLU_RS22860	0.47	-1.2
5,145,176	+		PFLU_RS22860	0.52	-2.8
5,145,176	+		PFLU_RS22860	0.52	-0.6
5,145,176	+		PFLU_RS22860	0.52	+0.7
5,145,176	+		PFLU_RS22860	0.52	+0.8
5,145,176	+		PFLU_RS22860	0.52	-1.9
5,145,176	+		PFLU_RS22860	0.52	-1.2
5,145,176	+		PFLU_RS22860	0.52	-0.4
5,145,176	+		PFLU_RS22860	0.52	-0.1
5,145,176	+		PFLU_RS22860	0.52	-1.7
5,145,177	-		PFLU_RS22860	0.53	+0.3
5,145,177	-		PFLU_RS22860	0.53	+0.3
5,145,180	+		PFLU_RS22860	0.53	-2.3
5,145,180	+		PFLU_RS22860	0.53	+0.2
5,145,180	+		PFLU_RS22860	0.53	-0.8
5,145,181	-		PFLU_RS22860	0.53	+0.6
5,145,181	-		PFLU_RS22860	0.53	+2.1
5,145,265	-		PFLU_RS22860	0.62	-0.0
5,145,273	+		PFLU_RS22860	0.63	-3.1
5,145,285	+		PFLU_RS22860	0.64	+1.0
5,145,285	+		PFLU_RS22860	0.64	+1.4
5,145,285	+		PFLU_RS22860	0.64	+0.7
5,145,285	+		PFLU_RS22860	0.64	-0.4
5,145,285	+		PFLU_RS22860	0.64	-2.0
5,145,285	+		PFLU_RS22860	0.64	-2.5
5,145,286	-		PFLU_RS22860	0.64	-2.1
5,145,286	-		PFLU_RS22860	0.64	-0.8
5,145,286	-		PFLU_RS22860	0.64	+0.8
5,145,286	-		PFLU_RS22860	0.64	-1.9
5,145,286	-		PFLU_RS22860	0.64	-1.2
5,145,315	+		PFLU_RS22860	0.67	+1.4
5,145,368	+		PFLU_RS22860	0.73	+1.2
5,145,368	+		PFLU_RS22860	0.73	-1.2
5,145,368	+		PFLU_RS22860	0.73	-1.3
5,145,368	+		PFLU_RS22860	0.73	-1.8
5,145,368	+		PFLU_RS22860	0.73	-1.7
5,145,368	+		PFLU_RS22860	0.73	+0.4
5,145,368	+		PFLU_RS22860	0.73	+0.1
5,145,368	+		PFLU_RS22860	0.73	+2.0
5,145,368	+		PFLU_RS22860	0.73	+2.2
5,145,368	+		PFLU_RS22860	0.73	-2.7
5,145,368	+		PFLU_RS22860	0.73	-0.9
5,145,368	+		PFLU_RS22860	0.73	-0.9
5,145,368	+		PFLU_RS22860	0.73	-2.0
5,145,368	+		PFLU_RS22860	0.73	+1.5
5,145,368	+		PFLU_RS22860	0.73	+1.0
5,145,368	+		PFLU_RS22860	0.73	-2.3
5,145,368	+		PFLU_RS22860	0.73	-0.8
5,145,368	+		PFLU_RS22860	0.73	+3.1
5,145,368	+		PFLU_RS22860	0.73	+0.0
5,145,369	-		PFLU_RS22860	0.73	+0.9
5,145,369	-		PFLU_RS22860	0.73	+2.1
5,145,369	-		PFLU_RS22860	0.73	-0.8
5,145,369	-		PFLU_RS22860	0.73	-0.8
5,145,369	-		PFLU_RS22860	0.73	-0.3
5,145,369	-		PFLU_RS22860	0.73	+0.8
5,145,369	-		PFLU_RS22860	0.73	-1.2
5,145,369	-		PFLU_RS22860	0.73	+0.5
5,145,369	-		PFLU_RS22860	0.73	+1.3
5,145,369	-		PFLU_RS22860	0.73	-2.0
5,145,369	-		PFLU_RS22860	0.73	+0.1
5,145,369	-		PFLU_RS22860	0.73	+0.3
5,145,369	-		PFLU_RS22860	0.73	-1.3
5,145,369	-		PFLU_RS22860	0.73	-2.9
5,145,369	-		PFLU_RS22860	0.73	-2.4
5,145,369	-		PFLU_RS22860	0.73	-0.6
5,145,369	-		PFLU_RS22860	0.73	+0.9
5,145,369	-		PFLU_RS22860	0.73	+0.7
5,145,372	+		PFLU_RS22860	0.73	+1.5
5,145,372	+		PFLU_RS22860	0.73	-3.3
5,145,373	-		PFLU_RS22860	0.73	-1.2
5,145,373	-		PFLU_RS22860	0.73	+2.0
5,145,449	+		PFLU_RS22860	0.81	-3.2
5,145,449	+		PFLU_RS22860	0.81	-0.1
5,145,449	+		PFLU_RS22860	0.81	-1.5
5,145,449	+		PFLU_RS22860	0.81	+1.0
5,145,450	-		PFLU_RS22860	0.81	+1.1
5,145,450	-		PFLU_RS22860	0.81	+0.8
5,145,450	-		PFLU_RS22860	0.81	-0.0
5,145,450	-		PFLU_RS22860	0.81	+0.8
5,145,450	-		PFLU_RS22860	0.81	-0.5
5,145,539	+				-0.0
5,145,539	+				-0.4
5,145,539	+				-0.3
5,145,539	+				-0.1
5,145,539	+				-2.3
5,145,539	+				-0.1
5,145,539	+				+0.2
5,145,540	-				+1.8
5,145,540	-				+0.4
5,145,540	-				+1.2
5,145,585	-				+1.3
5,145,599	+				-0.0
5,145,600	-				-0.3
5,145,618	+				-0.2
5,145,618	+				-0.2
5,145,618	+				+0.1
5,145,619	-				+2.3
5,145,619	-				-0.6
5,145,619	-				-0.3
5,145,619	-				-0.7
5,145,619	-				+0.4
5,145,619	-				-0.3
5,145,619	-				+0.9
5,145,779	-		PFLU_RS22865	0.10	-1.4
5,145,825	-		PFLU_RS22865	0.14	+0.4
5,145,847	+		PFLU_RS22865	0.15	+0.9
5,145,847	+		PFLU_RS22865	0.15	+1.1
5,145,847	+		PFLU_RS22865	0.15	-1.0
5,145,848	-		PFLU_RS22865	0.15	+1.0
5,145,848	-		PFLU_RS22865	0.15	-1.3
5,145,849	+		PFLU_RS22865	0.15	-0.4
5,145,849	+		PFLU_RS22865	0.15	-0.8
5,145,849	+		PFLU_RS22865	0.15	-0.8
5,145,849	+		PFLU_RS22865	0.15	+0.8
5,145,849	+		PFLU_RS22865	0.15	-0.4
5,145,849	+		PFLU_RS22865	0.15	+1.6
5,145,849	+		PFLU_RS22865	0.15	-2.3
5,145,849	+		PFLU_RS22865	0.15	+0.1
5,145,849	+		PFLU_RS22865	0.15	-0.5
5,145,850	-		PFLU_RS22865	0.15	+1.4
5,145,850	-		PFLU_RS22865	0.15	+1.9
5,145,850	-		PFLU_RS22865	0.15	-0.7
5,145,850	-		PFLU_RS22865	0.15	+0.3
5,145,850	-		PFLU_RS22865	0.15	-1.5
5,145,850	-		PFLU_RS22865	0.15	+0.9
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