Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17045

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
3,865,031	+		PFLU_RS17040	0.14	-0.5
3,865,031	+		PFLU_RS17040	0.14	+1.5
3,865,031	+		PFLU_RS17040	0.14	-1.5
3,865,032	-		PFLU_RS17040	0.14	-0.1
3,865,122	-		PFLU_RS17040	0.22	+0.6
3,865,172	+		PFLU_RS17040	0.27	-0.5
3,865,172	+		PFLU_RS17040	0.27	-0.5
3,865,172	+		PFLU_RS17040	0.27	-0.3
3,865,172	+		PFLU_RS17040	0.27	+0.2
3,865,173	-		PFLU_RS17040	0.27	+2.6
3,865,173	-		PFLU_RS17040	0.27	-2.0
3,865,173	-		PFLU_RS17040	0.27	+1.5
3,865,173	-		PFLU_RS17040	0.27	+0.4
3,865,173	-		PFLU_RS17040	0.27	-1.7
3,865,173	-		PFLU_RS17040	0.27	-1.7
3,865,173	-		PFLU_RS17040	0.27	+1.8
3,865,173	-		PFLU_RS17040	0.27	-0.8
3,865,173	-		PFLU_RS17040	0.27	-1.3
3,865,173	-		PFLU_RS17040	0.27	-0.1
3,865,173	-		PFLU_RS17040	0.27	+1.9
3,865,214	+		PFLU_RS17040	0.31	+0.5
3,865,214	+		PFLU_RS17040	0.31	-1.7
3,865,214	+		PFLU_RS17040	0.31	-0.5
3,865,214	+		PFLU_RS17040	0.31	+0.1
3,865,214	+		PFLU_RS17040	0.31	+0.9
3,865,214	+		PFLU_RS17040	0.31	+0.2
3,865,214	+		PFLU_RS17040	0.31	-0.6
3,865,214	+		PFLU_RS17040	0.31	-2.7
3,865,215	-		PFLU_RS17040	0.31	+1.2
3,865,215	-		PFLU_RS17040	0.31	-0.2
3,865,215	-		PFLU_RS17040	0.31	+0.5
3,865,215	-		PFLU_RS17040	0.31	-0.0
3,865,215	-		PFLU_RS17040	0.31	-0.2
3,865,215	-		PFLU_RS17040	0.31	+3.3
3,865,215	-		PFLU_RS17040	0.31	-1.1
3,865,215	-		PFLU_RS17040	0.31	+1.3
3,865,318	+		PFLU_RS17040	0.41	-0.4
3,865,318	+		PFLU_RS17040	0.41	-1.1
3,865,319	-		PFLU_RS17040	0.41	+2.2
3,865,319	-		PFLU_RS17040	0.41	+3.2
3,865,388	+		PFLU_RS17040	0.47	+0.8
3,865,389	-		PFLU_RS17040	0.47	+1.5
3,865,389	-		PFLU_RS17040	0.47	-1.6
3,865,389	-		PFLU_RS17040	0.47	+0.7
3,865,532	+		PFLU_RS17040	0.61	+2.9
3,865,533	-		PFLU_RS17040	0.61	-0.6
3,865,649	+		PFLU_RS17040	0.72	-2.2
3,865,649	+		PFLU_RS17040	0.72	+3.1
3,865,745	+		PFLU_RS17040	0.81	+1.5
3,865,746	-		PFLU_RS17040	0.81	-2.1
3,865,746	-		PFLU_RS17040	0.81	+1.9
3,865,748	+		PFLU_RS17040	0.81	+0.5
3,865,748	+		PFLU_RS17040	0.81	-2.5
3,865,748	+		PFLU_RS17040	0.81	-0.1
3,865,749	-		PFLU_RS17040	0.81	+0.0
3,865,749	-		PFLU_RS17040	0.81	+0.5
3,865,749	-		PFLU_RS17040	0.81	+0.2
3,865,749	-		PFLU_RS17040	0.81	-1.1
3,865,790	+		PFLU_RS17040	0.85	-1.1
3,865,790	+		PFLU_RS17040	0.85	-2.0
3,865,790	+		PFLU_RS17040	0.85	+1.2
3,865,790	+		PFLU_RS17040	0.85	-0.9
3,865,790	+		PFLU_RS17040	0.85	-1.3
3,865,790	+		PFLU_RS17040	0.85	+1.9
3,865,790	+		PFLU_RS17040	0.85	+0.8
3,865,791	-		PFLU_RS17040	0.85	+3.1
3,865,791	-		PFLU_RS17040	0.85	-1.7
3,865,791	-		PFLU_RS17040	0.85	-0.5
3,865,791	-		PFLU_RS17040	0.85	-1.3
3,865,791	-		PFLU_RS17040	0.85	-0.1
3,865,791	-		PFLU_RS17040	0.85	+1.7
3,865,791	-		PFLU_RS17040	0.85	+0.5
3,865,793	+		PFLU_RS17040	0.85	-1.5
3,865,793	+		PFLU_RS17040	0.85	-0.7
3,865,793	+		PFLU_RS17040	0.85	-0.8
3,865,794	-		PFLU_RS17040	0.85	+2.9
3,865,794	-		PFLU_RS17040	0.85	-0.7
3,865,794	-		PFLU_RS17040	0.85	-0.5
3,865,794	-		PFLU_RS17040	0.85	+0.5
3,865,794	-		PFLU_RS17040	0.85	+2.5
3,865,794	-		PFLU_RS17040	0.85	+0.8
3,865,794	-		PFLU_RS17040	0.85	-1.1
3,865,794	-		PFLU_RS17040	0.85	-1.2
3,865,799	+		PFLU_RS17040	0.86	+1.1
3,865,799	+		PFLU_RS17040	0.86	+4.1
3,865,799	+		PFLU_RS17040	0.86	+0.1
3,865,799	+		PFLU_RS17040	0.86	-1.8
3,865,800	-		PFLU_RS17040	0.86	+0.6
3,865,838	+		PFLU_RS17040	0.89	+1.5
3,865,838	+		PFLU_RS17040	0.89	-0.8
3,865,838	+		PFLU_RS17040	0.89	+1.1
3,865,838	+		PFLU_RS17040	0.89	+1.5
3,865,839	-		PFLU_RS17040	0.89	+0.5
3,865,839	-		PFLU_RS17040	0.89	-1.3
3,865,839	-		PFLU_RS17040	0.89	+0.1
3,865,839	-		PFLU_RS17040	0.89	+1.1
3,865,839	-		PFLU_RS17040	0.89	-0.1
3,865,839	-		PFLU_RS17040	0.89	+1.4
3,865,839	-		PFLU_RS17040	0.89	-2.5
3,865,839	-		PFLU_RS17040	0.89	+2.0
3,865,839	-		PFLU_RS17040	0.89	-1.6
3,866,206	+		PFLU_RS17045	0.30	-0.4
3,866,206	+		PFLU_RS17045	0.30	+1.6
3,866,206	+		PFLU_RS17045	0.30	-0.6
3,866,207	-		PFLU_RS17045	0.30	+1.7
3,866,207	-		PFLU_RS17045	0.30	+0.7
3,866,244	-		PFLU_RS17045	0.35	+1.5
3,866,344	-		PFLU_RS17045	0.48	+1.8
3,866,344	-		PFLU_RS17045	0.48	+0.8
3,866,454	+		PFLU_RS17045	0.62	+1.7
3,866,454	+		PFLU_RS17045	0.62	-1.5
3,866,455	-		PFLU_RS17045	0.63	+0.6
3,866,455	-		PFLU_RS17045	0.63	+1.4
3,866,455	-		PFLU_RS17045	0.63	+0.5
3,866,455	-		PFLU_RS17045	0.63	-0.4
3,866,694	+				+0.6
3,866,694	+				+2.1
3,866,695	-				-0.1
3,866,695	-				-2.3
3,866,695	-				+0.1
3,867,163	+				+1.5
3,867,163	+				-2.8
3,867,163	+				+0.4
3,867,163	+				-2.3
3,867,163	+				+0.3
3,867,164	-				-0.8
3,867,164	-				-1.1
3,867,164	-				-1.7
3,867,164	-				-0.5
3,867,164	-				-0.8
3,867,166	+				+0.0
3,867,249	+				+1.3
3,867,250	-				-1.8
3,867,252	-				+0.7
3,867,305	+				-1.1
3,867,392	+				-0.1
3,867,393	-				+0.8
3,867,509	+		PFLU_RS17055	0.12	-1.3
3,867,509	+		PFLU_RS17055	0.12	-1.7
3,867,509	+		PFLU_RS17055	0.12	+1.1
3,867,509	+		PFLU_RS17055	0.12	-1.3
3,867,510	-		PFLU_RS17055	0.12	-0.5
3,867,510	-		PFLU_RS17055	0.12	+4.3
3,867,510	-		PFLU_RS17055	0.12	-0.5
3,867,510	-		PFLU_RS17055	0.12	-1.6
3,867,510	-		PFLU_RS17055	0.12	-1.5
3,867,510	-		PFLU_RS17055	0.12	+0.3
3,867,510	-		PFLU_RS17055	0.12	+0.8
3,867,510	-		PFLU_RS17055	0.12	+0.8
3,867,510	-		PFLU_RS17055	0.12	-1.0
3,867,510	-		PFLU_RS17055	0.12	-1.0
3,867,510	-		PFLU_RS17055	0.12	+0.9
3,867,510	-		PFLU_RS17055	0.12	+0.2
3,867,524	+		PFLU_RS17055	0.13	+1.5
3,867,524	+		PFLU_RS17055	0.13	-0.5
3,867,525	-		PFLU_RS17055	0.13	-1.0
3,867,525	-		PFLU_RS17055	0.13	+2.8
3,867,525	-		PFLU_RS17055	0.13	-0.7