Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24865

Experiment: RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
5,180,614	-				-2.0
5,180,626	-				+0.4
5,180,633	-				+0.2
5,180,633	-				-2.7
5,180,634	-				+0.0
5,180,634	-				+1.0
5,180,641	+				+0.3
5,180,641	+				+0.7
5,180,675	+				-0.3
5,180,682	+				-1.0
5,180,683	+				-0.6
5,180,688	+				-0.7
5,180,689	+				+0.0
5,180,689	+				+0.8
5,180,689	+				-0.8
5,180,690	-				+0.7
5,180,690	-				-1.3
5,180,695	+				-0.7
5,180,695	+				-2.0
5,180,695	+				+0.0
5,180,697	-				+1.0
5,180,697	-				+0.7
5,180,697	-				-2.5
5,180,697	-				-1.6
5,180,697	-				+0.1
5,180,699	+				+0.3
5,180,703	-				+0.2
5,180,703	-				-0.3
5,180,703	-				+0.5
5,180,703	-				-2.4
5,180,705	+				+0.4
5,180,710	-				-0.5
5,180,739	+				+1.9
5,180,739	+				+0.1
5,180,740	+				-2.6
5,180,742	+				-1.2
5,180,747	-				-0.6
5,180,747	-				-0.7
5,180,754	+				+0.0
5,180,757	-				+0.3
5,180,762	-				-0.7
5,180,762	-				+0.2
5,180,762	-				-0.6
5,180,764	+				+3.3
5,180,764	+				-2.0
5,180,767	-				+0.0
5,180,769	-				-2.1
5,180,769	-				-1.8
5,180,785	+		BWI76_RS24860	0.11	-1.0
5,180,794	+		BWI76_RS24860	0.12	+0.8
5,180,799	+		BWI76_RS24860	0.12	+0.3
5,180,800	+				-0.4
5,180,807	-		BWI76_RS24860	0.13	-1.0
5,180,846	+		BWI76_RS24860	0.18	+0.5
5,180,854	-		BWI76_RS24860	0.18	+0.0
5,180,854	-		BWI76_RS24860	0.18	+0.0
5,180,886	+		BWI76_RS24860	0.22	+0.0
5,180,894	-		BWI76_RS24860	0.23	-1.2
5,180,978	+		BWI76_RS24860	0.32	+0.6
5,180,990	+		BWI76_RS24860	0.33	+0.5
5,180,990	+		BWI76_RS24860	0.33	-0.7
5,181,019	+		BWI76_RS24860	0.37	-0.7
5,181,019	+		BWI76_RS24860	0.37	+0.0
5,181,019	+		BWI76_RS24860	0.37	+0.4
5,181,020	+		BWI76_RS24860	0.37	-0.2
5,181,020	+		BWI76_RS24860	0.37	+1.0
5,181,020	+		BWI76_RS24860	0.37	-0.6
5,181,022	+		BWI76_RS24860	0.37	+2.6
5,181,027	-		BWI76_RS24860	0.37	-0.6
5,181,027	-		BWI76_RS24860	0.37	+0.2
5,181,027	-		BWI76_RS24860	0.37	+1.1
5,181,027	-		BWI76_RS24860	0.37	+1.0
5,181,063	+		BWI76_RS24860	0.41	-2.6
5,181,082	+		BWI76_RS24860	0.43	-0.1
5,181,082	+		BWI76_RS24860	0.43	+0.9
5,181,088	+		BWI76_RS24860	0.44	+0.9
5,181,093	+		BWI76_RS24860	0.45	+0.3
5,181,095	+		BWI76_RS24860	0.45	+0.0
5,181,101	-		BWI76_RS24860	0.45	-2.1
5,181,103	-		BWI76_RS24860	0.46	+0.5
5,181,152	+		BWI76_RS24860	0.51	-1.7
5,181,157	+		BWI76_RS24860	0.52	-0.7
5,181,159	-		BWI76_RS24860	0.52	-0.7
5,181,159	-		BWI76_RS24860	0.52	+0.1
5,181,159	-		BWI76_RS24860	0.52	+0.7
5,181,169	+		BWI76_RS24860	0.53	+0.2
5,181,178	+		BWI76_RS24860	0.54	+0.3
5,181,178	+		BWI76_RS24860	0.54	+1.0
5,181,178	+		BWI76_RS24860	0.54	-0.1
5,181,182	+		BWI76_RS24860	0.54	+0.1
5,181,183	+		BWI76_RS24860	0.54	+0.8
5,181,183	+		BWI76_RS24860	0.54	+1.2
5,181,183	+		BWI76_RS24860	0.54	+0.6
5,181,183	+		BWI76_RS24860	0.54	+0.5
5,181,186	-		BWI76_RS24860	0.55	+1.0
5,181,186	-		BWI76_RS24860	0.55	-1.2
5,181,186	-		BWI76_RS24860	0.55	-0.7
5,181,186	-		BWI76_RS24860	0.55	-1.3
5,181,186	-		BWI76_RS24860	0.55	-1.0
5,181,191	-		BWI76_RS24860	0.55	+0.0
5,181,191	-		BWI76_RS24860	0.55	+1.0
5,181,209	+		BWI76_RS24860	0.57	+0.0
5,181,218	+		BWI76_RS24860	0.58	+0.2
5,181,218	+		BWI76_RS24860	0.58	-1.4
5,181,240	-		BWI76_RS24860	0.61	+0.0
5,181,256	+		BWI76_RS24860	0.62	+0.3
5,181,256	+		BWI76_RS24860	0.62	+0.3
5,181,268	+		BWI76_RS24860	0.64	-2.4
5,181,282	-		BWI76_RS24860	0.65	-1.1
5,181,289	+		BWI76_RS24860	0.66	+0.4
5,181,295	+		BWI76_RS24860	0.67	-0.7
5,181,295	+		BWI76_RS24860	0.67	+1.0
5,181,295	+		BWI76_RS24860	0.67	+1.0
5,181,296	+		BWI76_RS24860	0.67	+0.4
5,181,297	-		BWI76_RS24860	0.67	+0.2
5,181,298	+		BWI76_RS24860	0.67	-0.6
5,181,301	+		BWI76_RS24860	0.67	-1.7
5,181,301	+				+0.7
5,181,303	-		BWI76_RS24860	0.68	+1.1
5,181,311	+		BWI76_RS24860	0.68	+0.8
5,181,311	+		BWI76_RS24860	0.68	+0.2
5,181,327	-		BWI76_RS24860	0.70	-2.0
5,181,332	+		BWI76_RS24860	0.71	-2.1
5,181,352	-		BWI76_RS24860	0.73	+0.3
5,181,375	+		BWI76_RS24860	0.75	-0.5
5,181,383	+		BWI76_RS24860	0.76	-0.3
5,181,383	+		BWI76_RS24860	0.76	-0.3
5,181,410	+		BWI76_RS24860	0.79	+1.9
5,181,410	+		BWI76_RS24860	0.79	-1.2
5,181,410	+		BWI76_RS24860	0.79	-1.6
5,181,414	+		BWI76_RS24860	0.80	-1.3
5,181,418	-		BWI76_RS24860	0.80	-2.3
5,181,418	-		BWI76_RS24860	0.80	+0.0
5,181,418	-		BWI76_RS24860	0.80	-1.3
5,181,423	-		BWI76_RS24860	0.81	-0.6
5,181,423	-		BWI76_RS24860	0.81	-1.0
5,181,472	+		BWI76_RS24860	0.86	-2.8
5,181,490	+		BWI76_RS24860	0.88	+1.0
5,181,490	+		BWI76_RS24860	0.88	-0.0
5,181,490	+		BWI76_RS24860	0.88	-1.3
5,181,490	+		BWI76_RS24860	0.88	-2.1
5,181,495	+		BWI76_RS24860	0.89	+0.8
5,181,495	+		BWI76_RS24860	0.89	+0.0
5,181,495	+		BWI76_RS24860	0.89	-0.6
5,181,495	+		BWI76_RS24860	0.89	+2.4
5,181,495	+		BWI76_RS24860	0.89	-1.6
5,181,495	+		BWI76_RS24860	0.89	-1.1
5,181,495	+		BWI76_RS24860	0.89	+1.5
5,181,495	+		BWI76_RS24860	0.89	-1.3
5,181,495	+		BWI76_RS24860	0.89	-0.1
5,181,495	+		BWI76_RS24860	0.89	+0.8
5,181,495	+		BWI76_RS24860	0.89	-0.7
5,181,495	+		BWI76_RS24860	0.89	+0.7
5,181,495	+		BWI76_RS24860	0.89	-0.1
5,181,495	+		BWI76_RS24860	0.89	-1.0
5,181,495	+		BWI76_RS24860	0.89	-0.9
5,181,495	+		BWI76_RS24860	0.89	-0.7
5,181,495	+		BWI76_RS24860	0.89	-1.1
5,181,495	+		BWI76_RS24860	0.89	+0.7
5,181,495	+		BWI76_RS24860	0.89	+0.1
5,181,495	+		BWI76_RS24860	0.89	+0.3
5,181,495	+		BWI76_RS24860	0.89	-0.1
5,181,495	+		BWI76_RS24860	0.89	-0.7
5,181,495	+		BWI76_RS24860	0.89	+0.4
5,181,495	+		BWI76_RS24860	0.89	+0.4
5,181,495	+		BWI76_RS24860	0.89	-1.3
5,181,495	+		BWI76_RS24860	0.89	-0.5
5,181,495	+		BWI76_RS24860	0.89	+0.0
5,181,495	+		BWI76_RS24860	0.89	+0.0
5,181,495	+		BWI76_RS24860	0.89	-0.4
5,181,495	+		BWI76_RS24860	0.89	+0.0
5,181,495	+		BWI76_RS24860	0.89	-0.9
5,181,495	+				+1.0
5,181,498	-		BWI76_RS24860	0.89	+0.3
5,181,498	-		BWI76_RS24860	0.89	-2.0
5,181,498	-		BWI76_RS24860	0.89	-1.1
5,181,498	-		BWI76_RS24860	0.89	-1.0
5,181,503	-		BWI76_RS24860	0.89	+0.3
5,181,503	-		BWI76_RS24860	0.89	+0.3
5,181,503	-		BWI76_RS24860	0.89	-1.6
5,181,503	-		BWI76_RS24860	0.89	+0.0
5,181,503	-		BWI76_RS24860	0.89	-2.1
5,181,503	-		BWI76_RS24860	0.89	+0.0
5,181,503	-		BWI76_RS24860	0.89	-2.0
5,181,503	-		BWI76_RS24860	0.89	+1.9
5,181,503	-		BWI76_RS24860	0.89	-3.4
5,181,503	-		BWI76_RS24860	0.89	+0.2
5,181,503	-		BWI76_RS24860	0.89	+0.5
5,181,503	-		BWI76_RS24860	0.89	-2.8
5,181,503	-		BWI76_RS24860	0.89	+0.5
5,181,503	-		BWI76_RS24860	0.89	+0.6
5,181,503	-		BWI76_RS24860	0.89	-0.4
5,181,503	-		BWI76_RS24860	0.89	+1.0
5,181,503	-		BWI76_RS24860	0.89	+1.0
5,181,503	-		BWI76_RS24860	0.89	+0.4
5,181,503	-		BWI76_RS24860	0.89	-0.8
5,181,503	-		BWI76_RS24860	0.89	+0.8
5,181,503	-		BWI76_RS24860	0.89	-1.0
5,181,503	-		BWI76_RS24860	0.89	-1.1
5,181,503	-		BWI76_RS24860	0.89	+0.4
5,181,503	-		BWI76_RS24860	0.89	-0.6
5,181,503	-		BWI76_RS24860	0.89	+0.5
5,181,503	-		BWI76_RS24860	0.89	+1.0
5,181,503	-		BWI76_RS24860	0.89	-1.7
5,181,503	-		BWI76_RS24860	0.89	+1.4
5,181,503	-		BWI76_RS24860	0.89	-0.2
5,181,503	-		BWI76_RS24860	0.89	+1.0
5,181,503	-		BWI76_RS24860	0.89	-1.1
5,181,508	-				+0.7
5,181,513	-				-0.8
5,181,514	+				-1.8
5,181,514	+				+1.0
5,181,514	+				-1.1
5,181,522	-				+0.0
5,181,522	-				-2.1
5,181,522	-				+1.0
5,181,522	-				-1.0
5,181,522	-				+1.0
5,181,522	-				-0.6
5,181,522	-				-1.5
5,181,522	-				-0.6
5,181,596	-				+0.0
5,181,628	+				+0.4
5,181,628	+				+0.0
5,181,628	+				+0.4
5,181,633	+				-0.7
5,181,636	-				+0.3
5,181,636	-				-0.3
5,181,638	+				-0.6
5,181,639	+				-1.6
5,181,639	+				+1.4
5,181,639	+				+0.8
5,181,639	+				+0.1
5,181,640	-				-2.6
5,181,641	-				+0.3
5,181,641	-				-2.1
5,181,647	-				-0.1
5,181,647	-				-0.6
5,181,647	-				-1.6
5,181,647	-				+0.0
5,181,647	-				-1.3
5,181,647	-				+0.1
5,181,647	-				-0.0
5,181,647	-				-1.0
5,181,647	-				+0.0
5,181,647	-				-0.6
5,181,647	-				+0.0
5,181,648	-				-0.6
5,181,668	-				-1.6
5,181,732	+				+0.0
5,181,739	+				+0.7
5,181,742	-				+1.0
5,181,802	+		BWI76_RS24865	0.14	-2.1
5,181,802	+		BWI76_RS24865	0.14	-1.3
5,181,810	+		BWI76_RS24865	0.14	-1.1
5,181,810	+		BWI76_RS24865	0.14	+0.2
5,181,810	+		BWI76_RS24865	0.14	-0.0
5,181,810	+		BWI76_RS24865	0.14	-0.9
5,181,810	+		BWI76_RS24865	0.14	-2.0
5,181,810	+		BWI76_RS24865	0.14	+0.1
5,181,810	+		BWI76_RS24865	0.14	+1.1
5,181,810	+		BWI76_RS24865	0.14	-0.8
5,181,810	+		BWI76_RS24865	0.14	+1.2
5,181,810	+		BWI76_RS24865	0.14	-0.0
5,181,810	+		BWI76_RS24865	0.14	-0.9
5,181,810	+				-0.6
5,181,810	+		BWI76_RS24865	0.14	-1.9
5,181,818	-		BWI76_RS24865	0.15	+0.3
5,181,818	-		BWI76_RS24865	0.15	+0.0
5,181,818	-		BWI76_RS24865	0.15	+0.6
5,181,818	-		BWI76_RS24865	0.15	-1.1
5,181,825	+		BWI76_RS24865	0.15	+0.6
5,181,825	+		BWI76_RS24865	0.15	-2.7
5,181,825	+		BWI76_RS24865	0.15	-0.2
5,181,825	+		BWI76_RS24865	0.15	+0.3
5,181,825	+		BWI76_RS24865	0.15	-0.9
5,181,825	+		BWI76_RS24865	0.15	+0.8
5,181,825	+		BWI76_RS24865	0.15	+1.4
5,181,825	+		BWI76_RS24865	0.15	-0.7
5,181,825	+		BWI76_RS24865	0.15	-0.4
5,181,825	+		BWI76_RS24865	0.15	-0.7
5,181,825	+		BWI76_RS24865	0.15	-0.1
5,181,825	+		BWI76_RS24865	0.15	+0.1
5,181,825	+		BWI76_RS24865	0.15	-0.1
5,181,825	+		BWI76_RS24865	0.15	+0.4
5,181,833	+		BWI76_RS24865	0.16	-0.5
5,181,833	-				+1.0
5,181,833	-		BWI76_RS24865	0.16	-1.0
5,181,833	-		BWI76_RS24865	0.16	-0.7
5,181,833	-		BWI76_RS24865	0.16	-0.5
5,181,833	-		BWI76_RS24865	0.16	+1.0
5,181,833	-		BWI76_RS24865	0.16	-1.3
5,181,833	-		BWI76_RS24865	0.16	+1.0
5,181,833	-		BWI76_RS24865	0.16	+0.5
5,181,833	-		BWI76_RS24865	0.16	+0.3
5,181,833	-		BWI76_RS24865	0.16	+1.0
5,181,833	-		BWI76_RS24865	0.16	+0.4
5,181,833	-		BWI76_RS24865	0.16	+0.7
5,181,833	-		BWI76_RS24865	0.16	+0.1
5,181,833	-		BWI76_RS24865	0.16	+0.2
5,181,833	-		BWI76_RS24865	0.16	+0.4
5,181,833	-		BWI76_RS24865	0.16	+1.0
5,181,833	-		BWI76_RS24865	0.16	-0.8
5,181,833	-		BWI76_RS24865	0.16	+1.0
5,181,843	+		BWI76_RS24865	0.16	-0.4
5,181,865	+		BWI76_RS24865	0.18	+0.7
5,181,916	-		BWI76_RS24865	0.22	-1.0
5,181,921	+		BWI76_RS24865	0.22	-1.1
5,181,922	+		BWI76_RS24865	0.22	+0.2
5,181,927	+		BWI76_RS24865	0.22	-0.1
5,181,927	+		BWI76_RS24865	0.22	-1.7
5,181,927	+		BWI76_RS24865	0.22	+0.7
5,181,927	+		BWI76_RS24865	0.22	+0.1
5,181,929	-		BWI76_RS24865	0.23	-2.4
5,181,935	-		BWI76_RS24865	0.23	+1.0
5,181,935	-		BWI76_RS24865	0.23	+1.1
5,181,935	-		BWI76_RS24865	0.23	-0.9
5,181,935	-		BWI76_RS24865	0.23	-1.8
5,181,935	-		BWI76_RS24865	0.23	+0.2
5,181,935	-		BWI76_RS24865	0.23	+0.4
5,181,935	-		BWI76_RS24865	0.23	-1.0
5,181,935	-		BWI76_RS24865	0.23	-0.4
5,181,938	+		BWI76_RS24865	0.23	+0.9
5,181,981	-		BWI76_RS24865	0.26	+0.4
5,181,987	+		BWI76_RS24865	0.27	-0.1
5,181,987	+		BWI76_RS24865	0.27	-1.1
5,181,988	+		BWI76_RS24865	0.27	+0.6
5,181,988	+		BWI76_RS24865	0.27	+0.9
5,181,988	+		BWI76_RS24865	0.27	+1.0
5,181,988	+		BWI76_RS24865	0.27	-0.7
5,181,988	+		BWI76_RS24865	0.27	+0.2
5,181,994	-		BWI76_RS24865	0.27	+1.0
5,181,996	-		BWI76_RS24865	0.27	-0.2
5,181,996	-		BWI76_RS24865	0.27	-0.6
5,181,996	-		BWI76_RS24865	0.27	+0.9
5,181,996	-		BWI76_RS24865	0.27	-0.2
5,181,996	-		BWI76_RS24865	0.27	-0.1
5,181,996	-		BWI76_RS24865	0.27	-1.9
5,181,996	-		BWI76_RS24865	0.27	-2.0
5,181,997	+		BWI76_RS24865	0.27	+1.0
5,182,007	-		BWI76_RS24865	0.28	-2.8
5,182,012	+		BWI76_RS24865	0.28	+0.0
5,182,029	-		BWI76_RS24865	0.30	+0.2
5,182,034	-		BWI76_RS24865	0.30	+0.5
5,182,047	+		BWI76_RS24865	0.31	+0.8
5,182,061	+		BWI76_RS24865	0.32	-0.5
5,182,063	+		BWI76_RS24865	0.32	+0.6
5,182,067	-		BWI76_RS24865	0.32	-1.3
5,182,069	-		BWI76_RS24865	0.32	-0.3
5,182,071	-		BWI76_RS24865	0.33	-2.4
5,182,072	-		BWI76_RS24865	0.33	-1.9
5,182,072	-		BWI76_RS24865	0.33	-0.1
5,182,075	+		BWI76_RS24865	0.33	+0.4
5,182,077	+		BWI76_RS24865	0.33	+0.2
5,182,080	+		BWI76_RS24865	0.33	-3.0
5,182,085	-		BWI76_RS24865	0.34	+0.6
5,182,088	-		BWI76_RS24865	0.34	-2.1
5,182,107	+		BWI76_RS24865	0.35	+0.6
5,182,115	-		BWI76_RS24865	0.36	+0.3
5,182,139	-		BWI76_RS24865	0.37	-0.8
5,182,144	-		BWI76_RS24865	0.38	+0.1
5,182,157	-		BWI76_RS24865	0.39	-2.6
5,182,161	-		BWI76_RS24865	0.39	+0.0
5,182,179	+		BWI76_RS24865	0.40	+0.9
5,182,183	+		BWI76_RS24865	0.41	+1.2
5,182,193	+		BWI76_RS24865	0.41	-1.0
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5,182,202	-		BWI76_RS24865	0.42	+0.9
5,182,206	-		BWI76_RS24865	0.42	-1.0
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5,182,217	-		BWI76_RS24865	0.43	-0.2
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5,182,220	-		BWI76_RS24865	0.43	-0.0
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5,182,248	-		BWI76_RS24865	0.45	+0.2
5,182,259	+		BWI76_RS24865	0.46	-2.7
5,182,312	-		BWI76_RS24865	0.50	+0.3
5,182,349	+		BWI76_RS24865	0.52	+0.3
5,182,350	+		BWI76_RS24865	0.52	+1.1
5,182,358	-		BWI76_RS24865	0.53	+0.0
5,182,410	+		BWI76_RS24865	0.57	-0.6
5,182,464	-		BWI76_RS24865	0.60	+1.0
5,182,464	-		BWI76_RS24865	0.60	-1.3
5,182,505	+		BWI76_RS24865	0.63	+2.0
5,182,506	-		BWI76_RS24865	0.63	+0.2
5,182,513	-		BWI76_RS24865	0.64	-0.3
5,182,625	-		BWI76_RS24865	0.72	+1.1
5,182,688	+		BWI76_RS24865	0.76	-0.5
5,182,751	+		BWI76_RS24865	0.81	-0.2
5,182,756	+		BWI76_RS24865	0.81	-0.7
5,182,861	-		BWI76_RS24865	0.89	+2.0
5,182,905	+				+1.7
5,182,951	+				+0.1
5,182,969	-				+0.0
5,183,051	-				+0.9
5,183,116	+		BWI76_RS24870	0.10	+0.3
5,183,124	-		BWI76_RS24870	0.11	+0.2
5,183,363	+		BWI76_RS24870	0.40	+0.2
5,183,364	+		BWI76_RS24870	0.41	+0.1
5,183,372	-		BWI76_RS24870	0.42	-2.2
5,183,389	+		BWI76_RS24870	0.44	+0.3
5,183,423	+		BWI76_RS24870	0.48	+0.2
5,183,489	+		BWI76_RS24870	0.56	+0.7
5,183,514	+		BWI76_RS24870	0.59	+0.4
5,183,538	+		BWI76_RS24870	0.62	-0.5
5,183,670	+		BWI76_RS24870	0.78	+1.3
5,183,954	+				+0.5
5,183,962	-				-0.6
5,183,962	-				-0.6
5,183,962	-				+0.2