Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12315

Experiment: RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
2,568,937	+		BWI76_RS12305	0.71	-0.6
2,569,001	-		BWI76_RS12305	0.85	-0.3
2,569,032	+				-1.7
2,569,040	-				-2.6
2,569,087	+				-0.3
2,569,432	+				-1.0
2,569,459	+				-0.5
2,569,459	+				-1.8
2,569,467	-				-1.6
2,569,467	-				-0.9
2,569,467	-				-2.0
2,569,485	+				+0.0
2,569,485	-				-0.2
2,569,490	+				-2.2
2,569,490	+				-1.0
2,569,490	+				-0.9
2,569,498	-				-1.4
2,569,498	-				-1.1
2,569,733	+				+0.4
2,569,742	-				-0.6
2,569,760	+				-1.3
2,569,778	+				-2.9
2,569,868	+				-0.4
2,569,931	+				+0.4
2,569,937	+				+0.0
2,569,937	+				+1.0
2,570,305	-		BWI76_RS12315	0.70	+2.0
2,570,404	+		BWI76_RS12315	0.89	+0.0
2,570,421	+				-1.8
2,570,423	+				+0.0
2,570,423	+				+1.0
2,570,497	+				+0.0
2,570,507	+				-1.8
2,570,534	-		BWI76_RS12320	0.16	-0.8
2,570,587	+		BWI76_RS12320	0.30	+0.4
2,570,592	+		BWI76_RS12320	0.32	-0.4
2,570,605	-		BWI76_RS12320	0.35	-1.8
2,570,611	+		BWI76_RS12320	0.37	+0.6
2,570,624	+		BWI76_RS12320	0.40	-0.9
2,570,624	+		BWI76_RS12320	0.40	-1.0
2,570,634	+		BWI76_RS12320	0.43	-4.0
2,570,647	+		BWI76_RS12320	0.46	-0.0
2,570,676	+		BWI76_RS12320	0.54	-0.7
2,570,676	+		BWI76_RS12320	0.54	+0.0
2,570,680	+				+1.0
2,570,697	+		BWI76_RS12320	0.60	-1.2
2,570,700	+		BWI76_RS12320	0.61	+0.4
2,570,701	+		BWI76_RS12320	0.61	-1.1
2,570,707	+		BWI76_RS12320	0.62	-0.2
2,570,707	+		BWI76_RS12320	0.62	-2.5
2,570,707	+		BWI76_RS12320	0.62	-2.6
2,570,707	+		BWI76_RS12320	0.62	-0.1
2,570,745	+		BWI76_RS12320	0.73	-1.4
2,570,848	+				-2.4
2,570,971	+				-0.8
2,570,979	-				-1.6
2,570,979	-				+0.1
2,571,009	+				-1.0
2,571,051	-				-1.3
2,571,059	-				-1.7
2,571,103	+				-0.9
2,571,106	-				-1.3
2,571,157	-				-2.1
2,571,208	+				-0.6
2,571,302	+		BWI76_RS12325	0.11	-2.7
2,571,310	-		BWI76_RS12325	0.11	-1.8
2,571,368	+				+1.0
2,571,393	+		BWI76_RS12325	0.14	-1.0