Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27890

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
6,209,637	+		PFLU_RS27885	0.54	-0.6
6,209,637	+		PFLU_RS27885	0.54	-0.1
6,209,637	+		PFLU_RS27885	0.54	-0.6
6,209,757	+		PFLU_RS27885	0.60	-0.3
6,209,758	-		PFLU_RS27885	0.60	-3.5
6,209,850	+		PFLU_RS27885	0.64	-3.0
6,209,850	+		PFLU_RS27885	0.64	-2.4
6,209,851	-		PFLU_RS27885	0.64	-2.3
6,209,853	+		PFLU_RS27885	0.64	-3.1
6,209,853	+		PFLU_RS27885	0.64	-3.3
6,209,854	-		PFLU_RS27885	0.64	-3.2
6,209,854	-		PFLU_RS27885	0.64	-3.4
6,209,854	-		PFLU_RS27885	0.64	-0.9
6,210,022	+		PFLU_RS27885	0.73	-2.6
6,210,022	+		PFLU_RS27885	0.73	-2.3
6,210,132	+		PFLU_RS27885	0.78	-1.7
6,210,132	+		PFLU_RS27885	0.78	-0.9
6,210,132	+		PFLU_RS27885	0.78	-3.0
6,210,133	-		PFLU_RS27885	0.78	-1.1
6,210,133	-		PFLU_RS27885	0.78	+0.2
6,210,133	-		PFLU_RS27885	0.78	-2.7
6,210,133	-		PFLU_RS27885	0.78	-0.8
6,210,136	+		PFLU_RS27885	0.78	-2.5
6,210,227	-		PFLU_RS27885	0.83	-2.8
6,210,272	-		PFLU_RS27885	0.85	-1.8
6,210,340	+		PFLU_RS27885	0.88	-3.5
6,210,340	+		PFLU_RS27885	0.88	+0.1
6,210,341	-		PFLU_RS27885	0.88	+0.9
6,210,341	-		PFLU_RS27885	0.88	-2.7
6,210,341	-		PFLU_RS27885	0.88	-0.8
6,210,453	+				-1.9
6,210,453	+				-2.9
6,210,453	+				-2.1
6,210,454	-				-2.5
6,210,456	+				+0.2
6,210,457	-				-0.1
6,210,457	-				-2.0
6,210,457	-				-2.8
6,210,465	+				-1.8
6,210,465	+				-2.1
6,210,465	+				-1.1
6,210,465	+				-1.8
6,210,465	+				-2.6
6,210,498	+				-0.2
6,210,498	+				-1.9
6,210,498	+				-0.3
6,210,498	+				-1.9
6,210,498	+				-1.1
6,210,499	-				-3.2
6,210,499	-				-3.2
6,210,499	-				-2.6
6,210,499	-				-2.6
6,210,499	-				-0.2
6,210,499	-				-1.8
6,210,499	-				-2.1
6,210,499	-				-3.2
6,210,499	-				-2.3
6,210,499	-				-2.9
6,210,499	-				-1.3
6,210,603	+				-2.0
6,210,604	-				-1.3
6,210,604	-				-1.1
6,210,657	+		PFLU_RS27890	0.10	-2.6
6,210,658	-		PFLU_RS27890	0.11	-3.3
6,210,658	-		PFLU_RS27890	0.11	+0.9
6,210,744	+		PFLU_RS27890	0.27	+1.2
6,210,744	+		PFLU_RS27890	0.27	-1.5
6,210,744	+		PFLU_RS27890	0.27	-2.7
6,210,744	+		PFLU_RS27890	0.27	-3.0
6,210,744	+		PFLU_RS27890	0.27	-0.3
6,210,744	+		PFLU_RS27890	0.27	-1.3
6,210,744	+		PFLU_RS27890	0.27	-0.9
6,210,744	+		PFLU_RS27890	0.27	+2.2
6,210,744	+		PFLU_RS27890	0.27	-2.5
6,210,745	-		PFLU_RS27890	0.27	-2.3
6,210,745	-		PFLU_RS27890	0.27	-1.6
6,210,745	-		PFLU_RS27890	0.27	-2.8
6,210,745	-		PFLU_RS27890	0.27	-1.2
6,210,745	-		PFLU_RS27890	0.27	+0.1
6,210,745	-		PFLU_RS27890	0.27	-3.5
6,210,745	-		PFLU_RS27890	0.27	-0.9
6,210,745	-		PFLU_RS27890	0.27	+0.2
6,210,745	-		PFLU_RS27890	0.27	-0.8
6,210,745	-		PFLU_RS27890	0.27	-2.6
6,210,745	-		PFLU_RS27890	0.27	-2.3
6,210,745	-		PFLU_RS27890	0.27	-2.2
6,210,745	-		PFLU_RS27890	0.27	-1.2
6,210,745	-		PFLU_RS27890	0.27	-1.5
6,210,745	-		PFLU_RS27890	0.27	-1.1
6,210,777	+		PFLU_RS27890	0.33	-3.0
6,210,777	+		PFLU_RS27890	0.33	-2.8
6,210,778	-		PFLU_RS27890	0.33	-2.9
6,210,778	-		PFLU_RS27890	0.33	+1.2
6,210,778	-		PFLU_RS27890	0.33	-2.1
6,210,778	-		PFLU_RS27890	0.33	-3.2
6,210,778	-		PFLU_RS27890	0.33	+0.2
6,210,882	+		PFLU_RS27890	0.53	-2.0
6,210,882	+		PFLU_RS27890	0.53	-0.9
6,210,883	-		PFLU_RS27890	0.53	-1.5
6,210,883	-		PFLU_RS27890	0.53	-3.0
6,210,883	-		PFLU_RS27890	0.53	-0.3
6,210,883	-		PFLU_RS27890	0.53	-1.1
6,210,883	-		PFLU_RS27890	0.53	-1.2
6,210,883	-		PFLU_RS27890	0.53	-1.8
6,210,883	-		PFLU_RS27890	0.53	-1.5
6,210,969	+		PFLU_RS27890	0.69	-0.1
6,210,970	-		PFLU_RS27890	0.69	-1.3
6,210,985	-		PFLU_RS27890	0.72	-1.2
6,210,985	-		PFLU_RS27890	0.72	-1.8
6,211,024	+		PFLU_RS27890	0.79	-2.3
6,211,024	+		PFLU_RS27890	0.79	-1.3
6,211,024	+		PFLU_RS27890	0.79	-3.1
6,211,024	+		PFLU_RS27890	0.79	-2.3
6,211,025	-		PFLU_RS27890	0.80	-3.4
6,211,050	+		PFLU_RS27890	0.84	-2.0
6,211,050	+		PFLU_RS27890	0.84	-0.9
6,211,050	+		PFLU_RS27890	0.84	+1.2
6,211,050	+		PFLU_RS27890	0.84	-1.8
6,211,050	+		PFLU_RS27890	0.84	-2.9
6,211,051	-		PFLU_RS27890	0.85	+1.2
6,211,051	-		PFLU_RS27890	0.85	-2.0
6,211,140	+				-2.5
6,211,140	+				-3.2
6,211,140	+				-2.2
6,211,141	-				-2.0
6,211,141	-				-2.1
6,211,141	-				-1.7
6,211,160	+				-2.9
6,211,161	-				-1.3
6,211,203	+				-1.9
6,211,203	+				-1.2
6,211,377	+		PFLU_RS27895	0.18	-2.6
6,211,377	+		PFLU_RS27895	0.18	-2.8
6,211,479	+		PFLU_RS27895	0.28	-3.6
6,211,479	+		PFLU_RS27895	0.28	-1.8
6,211,479	+		PFLU_RS27895	0.28	-1.2
6,211,480	-		PFLU_RS27895	0.28	-2.5
6,211,480	-		PFLU_RS27895	0.28	+0.2
6,211,480	-		PFLU_RS27895	0.28	-2.5
6,211,497	+		PFLU_RS27895	0.30	-1.8
6,211,604	-		PFLU_RS27895	0.41	-1.4
6,211,647	+		PFLU_RS27895	0.46	-2.3
6,211,647	+		PFLU_RS27895	0.46	-1.8
6,211,647	+		PFLU_RS27895	0.46	-1.0
6,211,647	+		PFLU_RS27895	0.46	+0.7
6,211,648	-		PFLU_RS27895	0.46	-2.0
6,211,648	-		PFLU_RS27895	0.46	-2.4
6,211,648	-		PFLU_RS27895	0.46	-2.7
6,211,788	+		PFLU_RS27895	0.60	-2.3
6,211,788	+		PFLU_RS27895	0.60	-0.9
6,211,788	+		PFLU_RS27895	0.60	-2.6
6,211,821	+		PFLU_RS27895	0.63	-2.7
6,211,821	+		PFLU_RS27895	0.63	-1.7
6,211,821	+		PFLU_RS27895	0.63	-2.7
6,211,821	+		PFLU_RS27895	0.63	-2.1
6,211,821	+		PFLU_RS27895	0.63	-2.0
6,211,821	+		PFLU_RS27895	0.63	+1.7
6,211,821	+		PFLU_RS27895	0.63	-3.5
6,211,821	+		PFLU_RS27895	0.63	-0.1
6,211,821	+		PFLU_RS27895	0.63	-0.9
6,211,821	+		PFLU_RS27895	0.63	-3.2
6,211,821	+		PFLU_RS27895	0.63	-1.9
6,211,821	+		PFLU_RS27895	0.63	-3.4
6,211,822	-		PFLU_RS27895	0.63	-2.1
6,211,822	-		PFLU_RS27895	0.63	-1.4
6,211,822	-		PFLU_RS27895	0.63	-1.8
6,211,822	-		PFLU_RS27895	0.63	-0.3
6,211,822	-		PFLU_RS27895	0.63	-2.5
6,211,822	-		PFLU_RS27895	0.63	-2.6
6,211,822	-		PFLU_RS27895	0.63	-2.3
6,211,822	-		PFLU_RS27895	0.63	-0.8
6,211,822	-		PFLU_RS27895	0.63	-2.6
6,211,822	-		PFLU_RS27895	0.63	-1.8
6,211,822	-		PFLU_RS27895	0.63	-2.6
6,211,822	-		PFLU_RS27895	0.63	-3.2
6,211,822	-		PFLU_RS27895	0.63	-1.8
6,211,822	-		PFLU_RS27895	0.63	-1.9
6,211,869	+		PFLU_RS27895	0.68	-2.7
6,211,870	-		PFLU_RS27895	0.68	-0.3
6,212,020	+		PFLU_RS27895	0.84	-2.3
6,212,021	-		PFLU_RS27895	0.84	-1.2
6,212,021	-		PFLU_RS27895	0.84	-0.6
6,212,021	-		PFLU_RS27895	0.84	-2.4
6,212,021	-		PFLU_RS27895	0.84	-3.2
6,212,129	-				-3.0
6,212,129	-				-1.7