Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27865

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
6,201,210	+		PFLU_RS27860	0.38	-0.3
6,201,210	+		PFLU_RS27860	0.38	-2.2
6,201,210	+		PFLU_RS27860	0.38	-0.9
6,201,211	-		PFLU_RS27860	0.38	-1.1
6,201,211	-		PFLU_RS27860	0.38	-2.1
6,201,211	-		PFLU_RS27860	0.38	-0.9
6,201,217	+		PFLU_RS27860	0.38	-1.3
6,201,217	+		PFLU_RS27860	0.38	-3.2
6,201,218	-		PFLU_RS27860	0.38	-1.3
6,201,356	-		PFLU_RS27860	0.51	+0.0
6,201,393	+		PFLU_RS27860	0.54	-2.1
6,201,393	+		PFLU_RS27860	0.54	+0.4
6,201,393	+		PFLU_RS27860	0.54	-1.3
6,201,394	-		PFLU_RS27860	0.54	-2.8
6,201,394	-		PFLU_RS27860	0.54	-1.9
6,201,394	-		PFLU_RS27860	0.54	-2.6
6,201,394	-		PFLU_RS27860	0.54	-2.0
6,201,394	-		PFLU_RS27860	0.54	-2.1
6,201,394	-		PFLU_RS27860	0.54	-0.6
6,201,394	-		PFLU_RS27860	0.54	-2.6
6,201,460	-		PFLU_RS27860	0.60	+1.8
6,201,460	-		PFLU_RS27860	0.60	-2.9
6,201,460	-		PFLU_RS27860	0.60	-2.6
6,201,460	-		PFLU_RS27860	0.60	-1.2
6,201,460	-		PFLU_RS27860	0.60	-1.8
6,201,513	+		PFLU_RS27860	0.65	-2.8
6,201,513	+		PFLU_RS27860	0.65	-2.6
6,201,513	+		PFLU_RS27860	0.65	-2.3
6,201,514	-		PFLU_RS27860	0.65	-1.1
6,201,514	-		PFLU_RS27860	0.65	-2.3
6,201,514	-		PFLU_RS27860	0.65	+0.2
6,201,514	-		PFLU_RS27860	0.65	-1.7
6,201,660	+		PFLU_RS27860	0.79	-1.9
6,201,690	+		PFLU_RS27860	0.81	+0.7
6,201,690	+		PFLU_RS27860	0.81	-2.6
6,201,690	+		PFLU_RS27860	0.81	-1.9
6,201,691	-		PFLU_RS27860	0.81	-0.1
6,201,691	-		PFLU_RS27860	0.81	-2.0
6,201,691	-		PFLU_RS27860	0.81	-2.1
6,201,923	+				-2.5
6,201,923	+				-2.3
6,201,924	-				-1.4
6,201,924	-				-0.8
6,201,924	-				-2.2
6,201,924	-				-0.6
6,201,924	-				-2.8
6,201,924	-				-3.1
6,201,961	+				-2.0
6,201,961	+				-0.2
6,201,961	+				-2.3
6,201,961	+				-2.6
6,201,961	+				-1.9
6,201,961	+				+0.7
6,201,961	+				-1.8
6,201,961	+				-1.1
6,201,961	+				-2.7
6,201,962	-				+0.8
6,201,962	-				-0.8
6,201,962	-				-2.3
6,201,962	-				-0.8
6,201,962	-				-1.6
6,201,965	+				-1.1
6,201,966	-				+0.1
6,201,966	-				-0.6
6,201,982	+				-2.0
6,201,982	+				+0.1
6,201,982	+				-2.8
6,201,982	+				-2.6
6,201,982	+				-2.2
6,201,982	+				-2.6
6,201,982	+				-3.1
6,201,982	+				+0.1
6,201,982	+				-0.9
6,201,982	+				-1.4
6,201,982	+				-1.9
6,201,982	+				-1.6
6,201,983	-				-0.3
6,201,983	-				-0.1
6,201,983	-				-1.8
6,201,983	-				-1.4
6,201,983	-				-1.1
6,201,983	-				-2.1
6,201,983	-				-2.1
6,201,983	-				-1.6
6,201,983	-				-1.5
6,201,983	-				-2.0
6,201,983	-				+0.2
6,201,983	-				-1.8
6,201,983	-				+0.8
6,201,983	-				-1.8
6,201,983	-				-2.7
6,201,983	-				-2.6
6,201,983	-				-1.0
6,201,983	-				-1.2
6,201,983	-				-0.6
6,201,986	+				-2.2
6,201,986	+				-2.1
6,201,986	+				-2.8
6,201,987	-				+0.2
6,201,987	-				-0.8
6,202,004	+				-0.3
6,202,054	+				-0.1
6,202,054	+				-2.0
6,202,108	+				-2.3
6,202,109	-				-0.1
6,202,131	-				-2.0
6,202,138	+				-1.8
6,202,138	+				-0.7
6,202,138	+				+0.4
6,202,139	-				-2.5
6,202,139	-				-2.8
6,202,139	-				-0.6
6,202,139	-				-2.7
6,202,139	-				+1.2
6,202,139	-				-1.2
6,202,196	-				+1.1
6,202,287	+				-0.8
6,202,287	+				-0.8
6,202,287	+				-2.8
6,202,288	-				-0.1
6,202,288	-				-1.6
6,202,311	-		PFLU_RS27865	0.10	-2.8
6,202,386	+		PFLU_RS27865	0.16	-0.6
6,202,386	+		PFLU_RS27865	0.16	-1.8
6,202,386	+		PFLU_RS27865	0.16	-2.4
6,202,386	+		PFLU_RS27865	0.16	-2.6
6,202,386	+		PFLU_RS27865	0.16	-3.1
6,202,386	+		PFLU_RS27865	0.16	-2.7
6,202,386	+		PFLU_RS27865	0.16	-3.1
6,202,387	-		PFLU_RS27865	0.16	-1.1
6,202,387	-		PFLU_RS27865	0.16	-1.7
6,202,387	-		PFLU_RS27865	0.16	-1.8
6,202,387	-		PFLU_RS27865	0.16	-2.8
6,202,387	-		PFLU_RS27865	0.16	-2.8
6,202,387	-		PFLU_RS27865	0.16	-2.8
6,202,387	-		PFLU_RS27865	0.16	-0.6
6,202,387	-		PFLU_RS27865	0.16	-2.7
6,202,387	-		PFLU_RS27865	0.16	-0.2
6,202,387	-		PFLU_RS27865	0.16	-3.3
6,202,387	-		PFLU_RS27865	0.16	-2.5
6,202,548	+		PFLU_RS27865	0.29	-1.8
6,202,548	+		PFLU_RS27865	0.29	-2.0
6,202,549	-		PFLU_RS27865	0.29	-2.2
6,202,653	+		PFLU_RS27865	0.37	-2.5
6,202,653	+		PFLU_RS27865	0.37	-2.0
6,202,653	+		PFLU_RS27865	0.37	+2.2
6,202,653	+		PFLU_RS27865	0.37	-1.3
6,202,653	+		PFLU_RS27865	0.37	-1.5
6,202,653	+		PFLU_RS27865	0.37	-2.9
6,202,653	+		PFLU_RS27865	0.37	-0.9
6,202,653	+		PFLU_RS27865	0.37	-1.1
6,202,654	-		PFLU_RS27865	0.37	-2.4
6,202,654	-		PFLU_RS27865	0.37	-1.2
6,202,654	-		PFLU_RS27865	0.37	+0.4
6,202,654	-		PFLU_RS27865	0.37	-2.5
6,202,654	-		PFLU_RS27865	0.37	-1.2
6,202,719	+		PFLU_RS27865	0.42	-1.6
6,202,719	+		PFLU_RS27865	0.42	-1.6
6,202,719	+		PFLU_RS27865	0.42	-3.0
6,202,719	+		PFLU_RS27865	0.42	-1.9
6,202,719	+		PFLU_RS27865	0.42	-2.2
6,202,719	+		PFLU_RS27865	0.42	-1.7
6,202,719	+		PFLU_RS27865	0.42	-2.8
6,202,719	+		PFLU_RS27865	0.42	-3.7
6,202,719	+		PFLU_RS27865	0.42	-2.4
6,202,719	+		PFLU_RS27865	0.42	-1.8
6,202,719	+		PFLU_RS27865	0.42	-1.3
6,202,719	+		PFLU_RS27865	0.42	-1.3
6,202,719	+		PFLU_RS27865	0.42	-1.5
6,202,720	-		PFLU_RS27865	0.42	-2.4
6,202,720	-		PFLU_RS27865	0.42	+0.7
6,202,720	-		PFLU_RS27865	0.42	-2.2
6,202,720	-		PFLU_RS27865	0.42	-0.8
6,202,720	-		PFLU_RS27865	0.42	-3.0
6,202,720	-		PFLU_RS27865	0.42	-2.8
6,202,731	+		PFLU_RS27865	0.43	-2.6
6,202,731	+		PFLU_RS27865	0.43	-2.8
6,202,731	+		PFLU_RS27865	0.43	-2.3
6,202,732	-		PFLU_RS27865	0.43	-1.8
6,202,732	-		PFLU_RS27865	0.43	-0.6
6,202,821	+		PFLU_RS27865	0.50	-2.8
6,202,822	-		PFLU_RS27865	0.50	-2.1
6,203,241	+		PFLU_RS27865	0.82	-2.6
6,203,241	+		PFLU_RS27865	0.82	-2.7
6,203,241	+		PFLU_RS27865	0.82	-1.7
6,203,241	+		PFLU_RS27865	0.82	-2.7
6,203,241	+		PFLU_RS27865	0.82	-3.3
6,203,241	+		PFLU_RS27865	0.82	-1.8
6,203,241	+		PFLU_RS27865	0.82	-2.3
6,203,242	-		PFLU_RS27865	0.82	-1.7
6,203,242	-		PFLU_RS27865	0.82	-1.2
6,203,242	-		PFLU_RS27865	0.82	-1.0
6,203,242	-		PFLU_RS27865	0.82	-2.7
6,203,364	+				-2.1
6,203,364	+				-2.8
6,203,364	+				-3.0
6,203,364	+				-2.2
6,203,364	+				-2.5
6,203,364	+				-2.6
6,203,364	+				-1.8
6,203,364	+				-1.8
6,203,364	+				-2.4
6,203,365	-				-1.8
6,203,365	-				-0.1
6,203,365	-				-2.7
6,203,365	-				-0.6
6,203,365	-				+0.7
6,203,365	-				-1.3
6,203,365	-				-2.3
6,203,397	+				-1.8
6,203,398	-				-2.3
6,203,469	+				+0.2
6,203,469	+				-1.1
6,203,469	+				-0.9
6,203,470	-				-1.3
6,203,470	-				+0.5
6,203,509	+				-0.8
6,203,509	+				-0.9
6,203,509	+				-1.5
6,203,509	+				+1.2
6,203,509	+				+2.1
6,203,510	-				-0.4
6,203,510	-				+1.1
6,203,510	-				+1.1
6,203,510	-				-0.1
6,203,510	-				+1.0
6,203,538	+				-1.1
6,203,538	+				-0.1
6,203,538	+				+1.6
6,203,538	+				-2.1
6,203,539	-				-0.1
6,203,539	-				-0.9
6,203,694	+				-2.1
6,203,694	+				+0.1
6,203,695	-				+0.7
6,203,695	-				+1.2
6,203,758	-				+3.0
6,203,772	-				-1.0
6,203,861	+				-0.6
6,203,861	+				-1.5
6,203,862	-				-0.2
6,203,862	-				-0.3
6,203,874	-				-0.6
6,203,874	-				+1.3
6,203,938	+				+0.6
6,203,943	-				+0.5
6,203,995	+				+2.5
6,203,995	+				-1.8
6,203,996	-				+0.7
6,204,048	-				+0.4
6,204,048	-				+0.6
6,204,048	-				-1.9
6,204,079	+				+0.2
6,204,185	-				-0.6
6,204,185	-				+1.3
6,204,185	-				+0.2
6,204,185	-				-2.7
6,204,207	+				+0.2
6,204,207	+				+0.7
6,204,207	+				-0.7
6,204,208	-				-0.9
6,204,208	-				-0.2
6,204,208	-				-0.3
6,204,209	+				-0.9
6,204,209	+				-1.1
6,204,209	+				-0.6
6,204,209	+				+1.7
6,204,210	-				+0.1
6,204,210	-				+0.1
6,204,210	-				-0.1
6,204,210	-				-0.6
6,204,210	-				-0.3
6,204,210	-				-0.1
6,204,224	-				-0.1
6,204,224	-				+2.2
6,204,224	-				+1.2
6,204,235	+				+0.4
6,204,235	+				+4.2
6,204,236	-				+1.3
6,204,296	-				-0.1
6,204,296	-				+1.8
6,204,314	+				-0.4
6,204,314	+				+0.8
6,204,314	+				+1.8
6,204,315	-				-0.0
6,204,319	-				+1.1
6,204,319	-				+0.4
6,204,362	+				-1.5
6,204,368	+				+0.2
6,204,368	+				-2.6
6,204,368	+				+0.9
6,204,369	-				-0.7
6,204,369	-				-1.1
6,204,369	-				+0.5
6,204,369	-				-1.2
6,204,374	+				-0.8
6,204,374	+				+1.5
6,204,374	+				+1.5
6,204,402	-				-1.1