Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11125

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
2,452,999	-				-1.4
2,453,028	-				+2.1
2,453,037	+				-2.0
2,453,037	+				-0.4
2,453,037	+				-1.4
2,453,037	+				+0.6
2,453,037	+				+1.2
2,453,038	-				-0.7
2,453,038	-				-0.5
2,453,038	-				-1.0
2,453,038	-				+0.0
2,453,038	-				+1.1
2,453,038	-				+0.6
2,453,038	-				+0.1
2,453,038	-				-1.4
2,453,038	-				-0.6
2,453,038	-				-0.4
2,453,038	-				+0.0
2,453,056	-				+3.2
2,453,070	+				-1.2
2,453,071	-				+2.0
2,453,071	-				-0.4
2,453,071	-				+1.4
2,453,071	-				+0.7
2,453,071	-				+2.6
2,453,108	-				-1.0
2,453,108	-				+0.3
2,453,133	+				+0.0
2,453,133	+				-0.7
2,453,134	-				-0.7
2,453,156	+				-0.3
2,453,156	+				-1.2
2,453,157	-				+0.9
2,453,157	-				-0.7
2,453,157	-				-0.9
2,453,157	-				-0.6
2,453,157	-				+0.0
2,453,179	+				+1.3
2,453,179	+				-2.1
2,453,180	-				+0.3
2,453,180	-				-0.4
2,453,202	+				+0.2
2,453,202	+				-2.0
2,453,203	-				-1.6
2,453,222	+				-2.6
2,453,223	-				+1.6
2,453,229	+				-0.2
2,453,229	+				+0.0
2,453,229	+				+1.4
2,453,229	+				+1.4
2,453,229	+				-1.6
2,453,229	+				-1.0
2,453,230	-				-0.6
2,453,230	-				+0.6
2,453,230	-				-1.4
2,453,230	-				-2.3
2,453,230	-				-0.4
2,453,230	-				+0.5
2,453,230	-				+0.0
2,453,261	+				+0.6
2,453,261	+				-1.0
2,453,261	+				+0.0
2,453,278	+				-0.4
2,453,279	-				+0.6
2,453,279	-				-2.0
2,453,325	-		PFLU_RS11120	0.13	+0.9
2,453,342	-		PFLU_RS11120	0.17	-2.3
2,453,500	+		PFLU_RS11120	0.52	-1.2
2,453,566	+		PFLU_RS11120	0.67	-2.2
2,453,567	-		PFLU_RS11120	0.67	+1.1
2,453,628	+		PFLU_RS11120	0.81	+0.6
2,453,628	+		PFLU_RS11120	0.81	-0.1
2,453,660	+		PFLU_RS11120	0.88	-2.0
2,453,660	+		PFLU_RS11120	0.88	-0.1
2,453,660	+		PFLU_RS11120	0.88	+0.3
2,453,660	+		PFLU_RS11120	0.88	+0.1
2,453,664	-		PFLU_RS11120	0.89	-2.8
2,453,705	+				-0.2
2,453,705	+				+1.9
2,453,705	+				+0.6
2,453,727	-				-0.3
2,453,776	-				+0.1
2,453,776	-				+1.6
2,453,862	+				-3.1
2,453,969	+				-3.0
2,453,970	-				-1.4
2,453,985	+				-2.9
2,454,139	+		PFLU_RS11125	0.11	-1.5
2,454,139	+		PFLU_RS11125	0.11	-1.6
2,454,177	+		PFLU_RS11125	0.14	-1.0
2,454,177	+		PFLU_RS11125	0.14	-1.5
2,454,177	+		PFLU_RS11125	0.14	+1.0
2,454,177	+		PFLU_RS11125	0.14	-0.4
2,454,177	+		PFLU_RS11125	0.14	-1.3
2,454,177	+		PFLU_RS11125	0.14	+0.8
2,454,177	+		PFLU_RS11125	0.14	-1.1
2,454,177	+		PFLU_RS11125	0.14	-2.5
2,454,177	+		PFLU_RS11125	0.14	-2.2
2,454,177	+		PFLU_RS11125	0.14	+0.0
2,454,177	+		PFLU_RS11125	0.14	-1.0
2,454,177	+		PFLU_RS11125	0.14	-2.7
2,454,177	+		PFLU_RS11125	0.14	+0.3
2,454,177	+		PFLU_RS11125	0.14	-2.9
2,454,177	+		PFLU_RS11125	0.14	+1.2
2,454,178	-		PFLU_RS11125	0.14	-0.4
2,454,178	-		PFLU_RS11125	0.14	-0.2
2,454,178	-		PFLU_RS11125	0.14	-0.7
2,454,178	-		PFLU_RS11125	0.14	-0.7
2,454,178	-		PFLU_RS11125	0.14	+0.3
2,454,178	-		PFLU_RS11125	0.14	-2.6
2,454,178	-		PFLU_RS11125	0.14	-1.6
2,454,178	-		PFLU_RS11125	0.14	-1.2
2,454,178	-		PFLU_RS11125	0.14	+0.6
2,454,178	-		PFLU_RS11125	0.14	-1.6
2,454,178	-		PFLU_RS11125	0.14	-0.9
2,454,178	-		PFLU_RS11125	0.14	-0.7
2,454,281	-		PFLU_RS11125	0.21	-1.1
2,454,334	-		PFLU_RS11125	0.25	-1.2
2,454,506	+		PFLU_RS11125	0.37	+0.4
2,454,615	+		PFLU_RS11125	0.45	+0.0
2,454,615	+		PFLU_RS11125	0.45	-2.1
2,454,616	-		PFLU_RS11125	0.45	-1.7
2,454,634	-		PFLU_RS11125	0.46	+1.4
2,454,736	+		PFLU_RS11125	0.54	-1.2
2,454,760	-		PFLU_RS11125	0.55	-2.6
2,454,808	+		PFLU_RS11125	0.59	-0.3
2,454,808	+		PFLU_RS11125	0.59	-1.6
2,454,852	-		PFLU_RS11125	0.62	-1.9
2,454,852	-		PFLU_RS11125	0.62	-1.6
2,454,907	+		PFLU_RS11125	0.66	-1.9
2,454,907	+		PFLU_RS11125	0.66	-1.0
2,454,907	+		PFLU_RS11125	0.66	-1.4
2,454,907	+		PFLU_RS11125	0.66	+0.3
2,454,907	+		PFLU_RS11125	0.66	+1.9
2,454,907	+		PFLU_RS11125	0.66	+1.6
2,454,908	-		PFLU_RS11125	0.66	-2.8
2,454,908	-		PFLU_RS11125	0.66	+0.5
2,454,908	-		PFLU_RS11125	0.66	-2.4
2,454,908	-		PFLU_RS11125	0.66	-2.1
2,454,908	-		PFLU_RS11125	0.66	-1.6
2,454,908	-		PFLU_RS11125	0.66	+0.1
2,454,908	-		PFLU_RS11125	0.66	-0.7
2,454,928	+		PFLU_RS11125	0.67	-2.8
2,454,928	+		PFLU_RS11125	0.67	-2.5
2,454,928	+		PFLU_RS11125	0.67	-1.4
2,454,929	-		PFLU_RS11125	0.67	+0.9
2,454,929	-		PFLU_RS11125	0.67	-2.9
2,455,114	+		PFLU_RS11125	0.80	-1.9
2,455,710	-		PFLU_RS11130	0.30	+0.1
2,455,890	-		PFLU_RS11130	0.47	+0.6
2,455,890	-		PFLU_RS11130	0.47	-0.4
2,455,890	-		PFLU_RS11130	0.47	+1.2
2,455,890	-		PFLU_RS11130	0.47	-1.7
2,455,960	-		PFLU_RS11130	0.53	+0.9
2,455,960	-		PFLU_RS11130	0.53	-1.4
2,456,009	+		PFLU_RS11130	0.58	+0.1
2,456,009	+		PFLU_RS11130	0.58	-1.7
2,456,009	+		PFLU_RS11130	0.58	-1.6
2,456,009	+		PFLU_RS11130	0.58	+0.2
2,456,009	+		PFLU_RS11130	0.58	+2.6
2,456,009	+		PFLU_RS11130	0.58	-1.9
2,456,009	+		PFLU_RS11130	0.58	-1.2
2,456,009	+		PFLU_RS11130	0.58	+0.0
2,456,009	+		PFLU_RS11130	0.58	-0.3
2,456,010	-		PFLU_RS11130	0.58	-1.7
2,456,010	-		PFLU_RS11130	0.58	+0.6
2,456,010	-		PFLU_RS11130	0.58	+1.1
2,456,010	-		PFLU_RS11130	0.58	-1.0
2,456,010	-		PFLU_RS11130	0.58	-2.2
2,456,010	-		PFLU_RS11130	0.58	-0.2
2,456,010	-		PFLU_RS11130	0.58	-2.0
2,456,010	-		PFLU_RS11130	0.58	+1.0
2,456,010	-		PFLU_RS11130	0.58	+0.5
2,456,010	-		PFLU_RS11130	0.58	-0.6
2,456,010	-		PFLU_RS11130	0.58	+0.6
2,456,010	-		PFLU_RS11130	0.58	+0.6
2,456,010	-		PFLU_RS11130	0.58	+1.6
2,456,103	+		PFLU_RS11130	0.67	-2.7
2,456,103	+		PFLU_RS11130	0.67	-0.7
2,456,103	+		PFLU_RS11130	0.67	+0.4
2,456,104	-		PFLU_RS11130	0.67	-0.6
2,456,104	-		PFLU_RS11130	0.67	-2.3
2,456,104	-		PFLU_RS11130	0.67	-0.5
2,456,104	-		PFLU_RS11130	0.67	+1.6
2,456,104	-		PFLU_RS11130	0.67	+0.7
2,456,104	-		PFLU_RS11130	0.67	+0.0
2,456,104	-		PFLU_RS11130	0.67	-0.4
2,456,113	+		PFLU_RS11130	0.68	-2.0
2,456,148	+		PFLU_RS11130	0.71	-1.4
2,456,149	-		PFLU_RS11130	0.71	-1.0
2,456,149	-		PFLU_RS11130	0.71	+0.2
2,456,172	+		PFLU_RS11130	0.73	+0.3
2,456,175	+		PFLU_RS11130	0.73	+0.3
2,456,176	-		PFLU_RS11130	0.73	+0.3
2,456,176	-		PFLU_RS11130	0.73	+0.6
2,456,176	-		PFLU_RS11130	0.73	+0.6
2,456,298	+		PFLU_RS11130	0.85	-0.5
2,456,298	+		PFLU_RS11130	0.85	+0.2
2,456,298	+		PFLU_RS11130	0.85	-2.0