Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09200

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
2,037,709	+		PFLU_RS09195	0.72	-1.7
2,037,709	+		PFLU_RS09195	0.72	-1.0
2,037,709	+		PFLU_RS09195	0.72	-1.9
2,037,710	-		PFLU_RS09195	0.72	-2.0
2,037,710	-		PFLU_RS09195	0.72	-2.1
2,037,710	-		PFLU_RS09195	0.72	-1.9
2,037,710	-		PFLU_RS09195	0.72	-1.7
2,037,710	-		PFLU_RS09195	0.72	-3.0
2,037,710	-		PFLU_RS09195	0.72	-3.6
2,037,710	-		PFLU_RS09195	0.72	-2.2
2,037,737	-		PFLU_RS09195	0.73	-1.9
2,037,842	-		PFLU_RS09195	0.78	-1.5
2,037,865	+		PFLU_RS09195	0.78	+1.1
2,037,866	-		PFLU_RS09195	0.79	-2.7
2,037,866	-		PFLU_RS09195	0.79	-1.5
2,038,037	-		PFLU_RS09195	0.85	-2.7
2,038,180	+				-1.5
2,038,180	+				-2.5
2,038,180	+				-2.5
2,038,180	+				-0.2
2,038,180	+				-0.6
2,038,180	+				+1.8
2,038,181	-				-1.7
2,038,181	-				-2.9
2,038,181	-				+0.3
2,038,294	+				-2.3
2,038,294	+				-3.3
2,038,295	-				-2.5
2,038,295	-				-1.2
2,038,295	-				-1.0
2,038,295	-				-0.2
2,038,295	-				-1.5
2,038,295	-				-2.4
2,038,348	+				-3.2
2,038,348	+				-1.4
2,038,348	+				-0.8
2,038,349	-				-2.5
2,038,349	-				-0.2
2,038,375	-				-3.5
2,038,391	+				-0.3
2,038,391	+				-1.0
2,038,391	+				-3.3
2,038,391	+				-1.2
2,038,392	-				-2.3
2,038,392	-				-2.1
2,038,392	-				-1.9
2,038,436	-				+0.6
2,038,471	+				-2.4
2,038,471	+				+0.6
2,038,471	+				+1.3
2,038,471	+				+1.1
2,038,471	+				+0.9
2,038,471	+				+2.4
2,038,472	-				+1.1
2,038,472	-				+1.8
2,038,472	-				+1.8
2,038,480	+				+0.2
2,038,481	-				+1.5
2,038,481	-				+0.6
2,038,588	+				+0.5
2,038,588	+				+1.4
2,038,588	+				+2.2
2,038,588	+				+2.5
2,038,588	+				+1.5
2,038,588	+				+2.8
2,038,589	-				+1.3
2,038,589	-				+1.9
2,038,589	-				+3.7
2,038,589	-				+2.1
2,038,589	-				+0.7
2,038,589	-				+2.4
2,038,589	-				+0.4
2,038,589	-				+2.2
2,038,589	-				+1.5
2,038,589	-				+0.4
2,038,589	-				+1.4
2,038,592	+				+0.5
2,038,592	+				+0.8
2,038,592	+				+0.3
2,038,592	+				+0.9
2,038,592	+				+1.1
2,038,592	+				+2.2
2,038,592	+				+1.6
2,038,592	+				+0.5
2,038,592	+				-0.8
2,038,592	+				+1.0
2,038,592	+				+1.5
2,038,592	+				+0.1
2,038,593	-				+1.1
2,038,593	-				+1.4
2,038,593	-				+0.4
2,038,593	-				+1.8
2,038,593	-				+2.6
2,038,593	-				+3.0
2,038,593	-				+2.2
2,038,593	-				+1.2
2,038,618	+				+2.9
2,038,700	+		PFLU_RS09200	0.18	-0.5
2,038,700	+		PFLU_RS09200	0.18	+1.3
2,038,700	+		PFLU_RS09200	0.18	+1.7
2,038,700	+		PFLU_RS09200	0.18	-0.8
2,038,701	-		PFLU_RS09200	0.18	+0.9
2,038,701	-		PFLU_RS09200	0.18	+2.3
2,038,703	+		PFLU_RS09200	0.18	+1.1
2,038,703	+		PFLU_RS09200	0.18	+1.4
2,038,703	+		PFLU_RS09200	0.18	+1.7
2,038,703	+		PFLU_RS09200	0.18	+1.0
2,038,703	+		PFLU_RS09200	0.18	+0.4
2,038,703	+		PFLU_RS09200	0.18	+0.9
2,038,703	+		PFLU_RS09200	0.18	+0.3
2,038,704	-		PFLU_RS09200	0.18	+1.0
2,038,704	-		PFLU_RS09200	0.18	+3.2
2,038,704	-		PFLU_RS09200	0.18	+1.6
2,038,704	-		PFLU_RS09200	0.18	+2.8
2,038,704	-		PFLU_RS09200	0.18	+0.9
2,038,704	-		PFLU_RS09200	0.18	+2.8
2,038,704	-		PFLU_RS09200	0.18	+0.1
2,038,704	-		PFLU_RS09200	0.18	+2.6
2,038,704	-		PFLU_RS09200	0.18	+1.7
2,038,704	-		PFLU_RS09200	0.18	+1.8
2,038,704	-		PFLU_RS09200	0.18	+2.0
2,038,704	-		PFLU_RS09200	0.18	+2.1
2,038,704	-		PFLU_RS09200	0.18	+3.1
2,038,704	-		PFLU_RS09200	0.18	+2.0
2,038,704	-		PFLU_RS09200	0.18	+1.2
2,038,704	-		PFLU_RS09200	0.18	+3.0
2,038,704	-		PFLU_RS09200	0.18	+1.8
2,038,704	-		PFLU_RS09200	0.18	+0.5
2,038,727	+		PFLU_RS09200	0.22	+1.3
2,038,728	-		PFLU_RS09200	0.22	+0.6
2,038,728	-		PFLU_RS09200	0.22	+1.2
2,038,736	+		PFLU_RS09200	0.23	+0.2
2,038,736	+		PFLU_RS09200	0.23	+1.4
2,038,736	+		PFLU_RS09200	0.23	-1.7
2,038,736	+		PFLU_RS09200	0.23	+0.8
2,038,736	+		PFLU_RS09200	0.23	-2.0
2,038,737	-		PFLU_RS09200	0.23	+0.9
2,038,737	-		PFLU_RS09200	0.23	+1.4
2,038,737	-		PFLU_RS09200	0.23	+0.6
2,038,737	-		PFLU_RS09200	0.23	+1.3
2,038,799	+		PFLU_RS09200	0.33	-1.5
2,038,799	+		PFLU_RS09200	0.33	+1.3
2,038,799	+		PFLU_RS09200	0.33	+1.4
2,038,799	+		PFLU_RS09200	0.33	+2.2
2,038,799	+		PFLU_RS09200	0.33	+1.4
2,038,799	+		PFLU_RS09200	0.33	+1.1
2,038,799	+		PFLU_RS09200	0.33	+1.4
2,038,799	+		PFLU_RS09200	0.33	+1.0
2,038,799	+		PFLU_RS09200	0.33	+0.8
2,038,799	+		PFLU_RS09200	0.33	+2.2
2,038,800	-		PFLU_RS09200	0.33	+3.3
2,038,800	-		PFLU_RS09200	0.33	+1.9
2,038,800	-		PFLU_RS09200	0.33	+2.1
2,038,800	-		PFLU_RS09200	0.33	+2.8
2,038,800	-		PFLU_RS09200	0.33	+2.8
2,038,800	-		PFLU_RS09200	0.33	+0.6
2,038,800	-		PFLU_RS09200	0.33	+0.6
2,038,800	-		PFLU_RS09200	0.33	+1.9
2,038,800	-		PFLU_RS09200	0.33	+1.6
2,038,800	-		PFLU_RS09200	0.33	+1.5
2,038,800	-		PFLU_RS09200	0.33	+2.8
2,038,800	-		PFLU_RS09200	0.33	+2.1
2,038,890	+		PFLU_RS09200	0.47	-0.2
2,038,891	-		PFLU_RS09200	0.47	+2.1
2,038,946	+		PFLU_RS09200	0.55	+0.2
2,038,946	+		PFLU_RS09200	0.55	+1.8
2,038,946	+		PFLU_RS09200	0.55	+0.5
2,038,958	+		PFLU_RS09200	0.57	-0.1
2,038,958	+		PFLU_RS09200	0.57	-0.2
2,038,958	+		PFLU_RS09200	0.57	-0.5
2,038,958	+		PFLU_RS09200	0.57	+0.6
2,038,959	-		PFLU_RS09200	0.57	+2.0
2,038,959	-		PFLU_RS09200	0.57	+1.6
2,038,959	-		PFLU_RS09200	0.57	+2.5
2,038,959	-		PFLU_RS09200	0.57	+2.4
2,038,959	-		PFLU_RS09200	0.57	+4.3
2,038,959	-		PFLU_RS09200	0.57	-1.3
2,038,959	-		PFLU_RS09200	0.57	+2.1
2,038,959	-		PFLU_RS09200	0.57	+2.4
2,039,025	+		PFLU_RS09200	0.67	+0.6
2,039,026	-		PFLU_RS09200	0.67	+0.7
2,039,026	-		PFLU_RS09200	0.67	+1.8
2,039,026	-		PFLU_RS09200	0.67	-1.4
2,039,102	+		PFLU_RS09200	0.79	+0.1
2,039,102	+		PFLU_RS09200	0.79	-1.5
2,039,102	+		PFLU_RS09200	0.79	+0.8
2,039,102	+		PFLU_RS09200	0.79	+0.5
2,039,102	+		PFLU_RS09200	0.79	+1.0
2,039,102	+		PFLU_RS09200	0.79	-0.1
2,039,102	+		PFLU_RS09200	0.79	+0.8
2,039,102	+		PFLU_RS09200	0.79	-0.2
2,039,102	+		PFLU_RS09200	0.79	+0.3
2,039,102	+		PFLU_RS09200	0.79	+1.7
2,039,102	+		PFLU_RS09200	0.79	+0.7
2,039,102	+		PFLU_RS09200	0.79	-0.1
2,039,102	+		PFLU_RS09200	0.79	-2.2
2,039,102	+		PFLU_RS09200	0.79	+0.5
2,039,102	+		PFLU_RS09200	0.79	-0.0
2,039,102	+		PFLU_RS09200	0.79	+1.1
2,039,102	+		PFLU_RS09200	0.79	-0.5
2,039,102	+		PFLU_RS09200	0.79	-0.5
2,039,102	+		PFLU_RS09200	0.79	+1.8
2,039,102	+		PFLU_RS09200	0.79	+0.6
2,039,102	+		PFLU_RS09200	0.79	+1.8
2,039,103	-		PFLU_RS09200	0.79	+1.1
2,039,103	-		PFLU_RS09200	0.79	+1.1
2,039,103	-		PFLU_RS09200	0.79	+0.7
2,039,103	-		PFLU_RS09200	0.79	+2.5
2,039,103	-		PFLU_RS09200	0.79	+2.1
2,039,103	-		PFLU_RS09200	0.79	+0.7
2,039,103	-		PFLU_RS09200	0.79	+0.2
2,039,103	-		PFLU_RS09200	0.79	+0.6
2,039,103	-		PFLU_RS09200	0.79	+2.2
2,039,103	-		PFLU_RS09200	0.79	+1.0
2,039,103	-		PFLU_RS09200	0.79	+0.5
2,039,103	-		PFLU_RS09200	0.79	-0.2
2,039,103	-		PFLU_RS09200	0.79	+1.4
2,039,103	-		PFLU_RS09200	0.79	+1.8
2,039,103	-		PFLU_RS09200	0.79	+1.2
2,039,103	-		PFLU_RS09200	0.79	+1.5
2,039,103	-		PFLU_RS09200	0.79	+1.8
2,039,171	+		PFLU_RS09200	0.89	+1.3
2,039,229	+				+1.0
2,039,229	+				+0.6
2,039,229	+				+1.1
2,039,250	+				-1.2
2,039,250	+				+1.6
2,039,250	+				-0.5
2,039,250	+				-3.0
2,039,250	+				+1.4
2,039,250	+				+0.4
2,039,250	+				+1.1
2,039,251	-				+0.2
2,039,251	-				+1.4
2,039,251	-				+1.5
2,039,251	-				+1.8
2,039,251	-				+1.2
2,039,287	+				+1.5
2,039,287	+				+0.3
2,039,287	+				-1.4
2,039,288	-				+1.1
2,039,288	-				+0.7
2,039,288	-				+1.2
2,039,288	-				+2.1
2,039,288	-				+1.0
2,039,288	-				+1.4
2,039,320	+				-0.1
2,039,378	+		PFLU_RS09205	0.13	-1.0
2,039,378	+		PFLU_RS09205	0.13	+4.6
2,039,378	+		PFLU_RS09205	0.13	+0.0
2,039,378	+		PFLU_RS09205	0.13	+1.0
2,039,378	+		PFLU_RS09205	0.13	-0.9
2,039,379	-		PFLU_RS09205	0.13	+1.3
2,039,379	-		PFLU_RS09205	0.13	+0.1
2,039,513	+		PFLU_RS09205	0.34	-1.4
2,039,701	+		PFLU_RS09205	0.65	+2.0
2,039,701	+		PFLU_RS09205	0.65	+0.1
2,039,747	+		PFLU_RS09205	0.72	+1.4
2,039,747	+		PFLU_RS09205	0.72	-0.5
2,039,747	+		PFLU_RS09205	0.72	-1.0
2,039,747	+		PFLU_RS09205	0.72	-0.8
2,039,747	+		PFLU_RS09205	0.72	-1.4
2,039,747	+		PFLU_RS09205	0.72	-0.8
2,039,747	+		PFLU_RS09205	0.72	-0.8
2,039,747	+		PFLU_RS09205	0.72	+2.2
2,039,747	+		PFLU_RS09205	0.72	+1.2
2,039,748	-		PFLU_RS09205	0.72	+0.8
2,039,748	-		PFLU_RS09205	0.72	+3.4
2,039,748	-		PFLU_RS09205	0.72	+2.5
2,039,748	-		PFLU_RS09205	0.72	+0.1
2,039,748	-		PFLU_RS09205	0.72	+0.2
2,039,748	-		PFLU_RS09205	0.72	+0.3
2,039,748	-		PFLU_RS09205	0.72	-2.6
2,039,801	+		PFLU_RS09205	0.81	+1.7
2,039,801	+		PFLU_RS09205	0.81	-1.5
2,039,801	+		PFLU_RS09205	0.81	-0.7
2,039,801	+		PFLU_RS09205	0.81	-0.1
2,039,801	+		PFLU_RS09205	0.81	-0.7
2,039,801	+		PFLU_RS09205	0.81	+1.1
2,039,801	+		PFLU_RS09205	0.81	+0.3
2,039,801	+		PFLU_RS09205	0.81	+0.2
2,039,802	-		PFLU_RS09205	0.81	-2.4
2,039,802	-		PFLU_RS09205	0.81	-1.3
2,039,802	-		PFLU_RS09205	0.81	-1.5
2,039,802	-		PFLU_RS09205	0.81	-1.1
2,039,802	-		PFLU_RS09205	0.81	+1.0
2,039,802	-		PFLU_RS09205	0.81	-1.0
2,039,847	+		PFLU_RS09205	0.89	-0.8
2,039,847	+		PFLU_RS09205	0.89	-2.6
2,039,847	+		PFLU_RS09205	0.89	+1.4
2,039,848	-		PFLU_RS09205	0.89	+0.3
2,039,848	-		PFLU_RS09205	0.89	+0.9
2,039,848	-		PFLU_RS09205	0.89	+0.8
2,039,848	-		PFLU_RS09205	0.89	-0.0
2,039,848	-		PFLU_RS09205	0.89	-0.1
2,039,858	+				+0.3
2,039,859	-				+1.0
2,039,915	+				-0.7
2,039,915	+				-0.9
2,039,915	+				+2.1
2,039,915	+				-2.0
2,039,915	+				+1.8
2,039,915	+				-0.4
2,039,916	-				+0.3
2,039,916	-				+0.2
2,039,916	-				-0.4
2,039,916	-				+0.6
2,039,916	-				+0.5
2,039,916	-				-1.2
2,039,916	-				+0.5
2,039,916	-				-1.5
2,039,916	-				-0.2
2,039,916	-				+0.2
2,039,919	-				-0.3
2,039,925	+				-0.5
2,039,926	-				-0.5
2,039,928	+				+0.4
2,039,928	+				+2.1
2,039,928	+				-1.4
2,039,929	-				-2.6
2,039,929	-				+1.0
2,039,929	-				+0.1
2,039,929	-				-0.4
2,039,929	-				-0.5
2,039,929	-				-0.9
2,039,943	+				+1.9
2,039,943	+				+0.8
2,039,943	+				-0.7
2,039,943	+				-1.5
2,039,943	+				-1.8
2,039,943	+				-1.1
2,039,943	+				+0.9
2,039,944	-				-0.4
2,039,944	-				+0.0
2,039,944	-				+1.8
2,039,994	+				+1.8
2,039,994	+				-2.3
2,039,994	+				+1.3
2,039,994	+				+0.2
2,039,995	-				+0.2
2,039,995	-				-0.2
2,039,995	-				-0.1
2,039,995	-				+0.8
2,040,015	+				+0.8
2,040,015	+				-0.3
2,040,015	+				-0.4
2,040,016	-				-1.5
2,040,016	-				-0.1
2,040,016	-				+0.2
2,040,016	-				+0.5
2,040,016	-				-1.9
2,040,016	-				-0.0
2,040,016	-				-1.8
2,040,016	-				+0.1
2,040,016	-				+2.0
2,040,016	-				-2.8
2,040,016	-				+1.4
2,040,016	-				-0.4
2,040,024	+				+2.1
2,040,024	+				-1.1
2,040,024	+				+0.7
2,040,024	+				+0.3
2,040,024	+				+1.1
2,040,024	+				+0.2
2,040,024	+				-0.1
2,040,025	-				+1.9
2,040,025	-				-0.5
2,040,025	-				+1.6
2,040,025	-				+4.0
2,040,025	-				+0.2
2,040,025	-				+0.1
2,040,045	-				+1.1
2,040,045	-				-1.7
2,040,045	-				-2.0
2,040,082	-				-2.5
2,040,082	-				-0.1
2,040,241	+		PFLU_RS09210	0.20	+0.2
2,040,241	+		PFLU_RS09210	0.20	+0.5
2,040,241	+		PFLU_RS09210	0.20	+1.0
2,040,241	+		PFLU_RS09210	0.20	-0.8
2,040,241	+		PFLU_RS09210	0.20	+0.6
2,040,241	+		PFLU_RS09210	0.20	+1.8
2,040,242	-		PFLU_RS09210	0.20	-2.0
2,040,242	-		PFLU_RS09210	0.20	-0.8