Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS00555

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
113,223	+		PFLU_RS00545	0.66	-1.8
113,223	+		PFLU_RS00545	0.66	-2.1
113,223	+		PFLU_RS00545	0.66	-0.1
113,223	+		PFLU_RS00545	0.66	-2.5
113,223	+		PFLU_RS00545	0.66	+0.8
113,223	+		PFLU_RS00545	0.66	-1.3
113,224	-		PFLU_RS00545	0.66	-1.3
113,224	-		PFLU_RS00545	0.66	-0.9
113,224	-		PFLU_RS00545	0.66	-3.6
113,224	-		PFLU_RS00545	0.66	-0.9
113,269	+		PFLU_RS00545	0.69	-0.6
113,269	+		PFLU_RS00545	0.69	-2.6
113,269	+		PFLU_RS00545	0.69	+0.2
113,269	+		PFLU_RS00545	0.69	-0.5
113,269	+		PFLU_RS00545	0.69	-2.3
113,269	+		PFLU_RS00545	0.69	-3.0
113,269	+		PFLU_RS00545	0.69	-0.4
113,269	+		PFLU_RS00545	0.69	-2.1
113,269	+		PFLU_RS00545	0.69	-1.4
113,269	+		PFLU_RS00545	0.69	-1.0
113,269	+		PFLU_RS00545	0.69	-1.3
113,269	+		PFLU_RS00545	0.69	-0.8
113,269	+		PFLU_RS00545	0.69	-1.2
113,269	+		PFLU_RS00545	0.69	-2.6
113,269	+		PFLU_RS00545	0.69	+0.3
113,269	+		PFLU_RS00545	0.69	-2.0
113,269	+		PFLU_RS00545	0.69	-1.7
113,270	-		PFLU_RS00545	0.70	-1.4
113,270	-		PFLU_RS00545	0.70	-1.9
113,270	-		PFLU_RS00545	0.70	-2.1
113,270	-		PFLU_RS00545	0.70	-1.5
113,270	-		PFLU_RS00545	0.70	-2.0
113,270	-		PFLU_RS00545	0.70	-0.2
113,386	+		PFLU_RS00545	0.78	+0.3
113,387	-		PFLU_RS00545	0.78	-2.0
113,453	+		PFLU_RS00545	0.82	-1.6
113,453	+		PFLU_RS00545	0.82	-3.2
113,511	+		PFLU_RS00545	0.86	-1.4
113,512	-		PFLU_RS00545	0.86	-2.1
113,512	-		PFLU_RS00545	0.86	-0.4
113,512	-		PFLU_RS00545	0.86	-1.5
113,548	+		PFLU_RS00545	0.89	-1.2
113,548	+		PFLU_RS00545	0.89	+0.4
113,548	+		PFLU_RS00545	0.89	+0.1
113,548	+		PFLU_RS00545	0.89	-2.9
113,548	+		PFLU_RS00545	0.89	-1.9
113,548	+		PFLU_RS00545	0.89	-0.7
113,548	+		PFLU_RS00545	0.89	-1.2
113,549	-		PFLU_RS00545	0.89	-1.6
113,549	-		PFLU_RS00545	0.89	+0.2
113,549	-		PFLU_RS00545	0.89	+0.5
113,549	-		PFLU_RS00545	0.89	-1.5
113,549	-		PFLU_RS00545	0.89	-2.7
113,549	-		PFLU_RS00545	0.89	-0.4
113,549	-		PFLU_RS00545	0.89	-1.1
113,550	+		PFLU_RS00545	0.89	-1.5
113,550	+		PFLU_RS00545	0.89	-1.7
113,550	+		PFLU_RS00545	0.89	-0.7
113,550	+		PFLU_RS00545	0.89	-0.8
113,550	+		PFLU_RS00545	0.89	-1.5
113,550	+		PFLU_RS00545	0.89	-1.6
113,550	+		PFLU_RS00545	0.89	+0.7
113,550	+		PFLU_RS00545	0.89	-0.5
113,550	+		PFLU_RS00545	0.89	-3.0
113,550	+		PFLU_RS00545	0.89	-0.5
113,550	+		PFLU_RS00545	0.89	-1.7
113,550	+		PFLU_RS00545	0.89	-1.3
113,550	+		PFLU_RS00545	0.89	-0.9
113,550	+		PFLU_RS00545	0.89	+0.1
113,550	+		PFLU_RS00545	0.89	-2.1
113,550	+		PFLU_RS00545	0.89	-0.7
113,550	+		PFLU_RS00545	0.89	+0.2
113,551	-		PFLU_RS00545	0.89	+1.6
113,551	-		PFLU_RS00545	0.89	-0.5
113,551	-		PFLU_RS00545	0.89	-1.9
113,551	-		PFLU_RS00545	0.89	-1.2
113,551	-		PFLU_RS00545	0.89	-0.1
113,551	-		PFLU_RS00545	0.89	-2.0
113,551	-		PFLU_RS00545	0.89	-2.5
113,551	-		PFLU_RS00545	0.89	-1.5
113,551	-		PFLU_RS00545	0.89	-1.4
113,551	-		PFLU_RS00545	0.89	-0.8
113,551	-		PFLU_RS00545	0.89	-2.2
113,551	-		PFLU_RS00545	0.89	-3.1
113,551	-		PFLU_RS00545	0.89	-0.6
113,551	-		PFLU_RS00545	0.89	-3.1
113,551	-		PFLU_RS00545	0.89	-1.4
113,551	-		PFLU_RS00545	0.89	+0.8
113,551	-		PFLU_RS00545	0.89	+1.2
113,551	-		PFLU_RS00545	0.89	-0.0
113,569	+				-1.2
113,569	+				-3.1
113,569	+				-1.8
113,569	+				-0.2
113,569	+				+0.1
113,569	+				-2.5
113,570	-				-1.7
113,570	-				+0.6
113,570	-				-0.2
113,570	-				-1.2
113,570	-				-3.3
113,570	-				-3.1
113,570	-				-2.3
113,570	-				-0.8
113,570	-				-0.4
113,570	-				-2.2
113,570	-				-0.6
113,570	-				-2.4
113,573	+				-1.7
113,573	+				-3.2
113,573	+				-0.9
113,574	-				-2.8
113,574	-				-0.9
113,574	-				-1.9
113,574	-				-1.9
113,679	+				-1.1
113,680	-				-0.0
113,680	-				-1.7
113,680	-				-1.4
113,680	-				-0.1
113,690	+				-1.8
113,691	-				-0.6
113,708	+				-2.0
113,708	+				-0.1
113,708	+				-0.1
113,708	+				-1.1
113,708	+				-2.1
113,708	+				-1.3
113,708	+				+0.5
113,709	-				+0.2
113,709	-				-1.2
113,791	+		PFLU_RS00550	0.26	-0.4
113,791	+		PFLU_RS00550	0.26	-1.8
113,791	+		PFLU_RS00550	0.26	-2.1
113,791	+		PFLU_RS00550	0.26	-1.1
113,791	+		PFLU_RS00550	0.26	-2.2
113,792	-		PFLU_RS00550	0.26	-3.7
113,792	-		PFLU_RS00550	0.26	-2.2
113,941	+		PFLU_RS00550	0.73	-0.5
113,942	-		PFLU_RS00550	0.73	-1.6
113,942	-		PFLU_RS00550	0.73	-1.5
113,969	+		PFLU_RS00550	0.82	-2.6
113,969	+		PFLU_RS00550	0.82	-2.3
113,969	+		PFLU_RS00550	0.82	-1.7
113,969	+		PFLU_RS00550	0.82	-1.2
113,969	+		PFLU_RS00550	0.82	-1.1
113,970	-		PFLU_RS00550	0.82	-2.5
113,970	-		PFLU_RS00550	0.82	-1.8
113,970	-		PFLU_RS00550	0.82	-1.2
113,999	+				+0.0
113,999	+				-2.0
113,999	+				+0.1
113,999	+				-1.6
113,999	+				-0.7
113,999	+				-0.8
113,999	+				-0.7
113,999	+				-2.5
113,999	+				-1.1
113,999	+				-1.5
113,999	+				-0.8
113,999	+				-2.8
113,999	+				-0.9
113,999	+				-0.4
113,999	+				-1.7
114,000	-				-1.7
114,000	-				-0.1
114,000	-				-3.2
114,000	-				-1.1
114,000	-				+2.2
114,000	-				-2.9
114,000	-				-1.9
114,004	-				-1.1
114,015	+				-1.1
114,015	+				-3.2
114,015	+				-1.4
114,015	+				-0.6
114,015	+				-0.8
114,015	+				-0.6
114,015	+				-2.4
114,015	+				-1.1
114,015	+				-2.0
114,015	+				-3.7
114,015	+				-0.2
114,015	+				-1.7
114,015	+				-2.6
114,015	+				-1.4
114,015	+				+0.0
114,016	-				+0.6
114,016	-				+0.4
114,016	-				+1.0
114,016	-				-2.2
114,016	-				-2.2
114,016	-				+0.4
114,016	-				+0.6
114,016	-				-0.9
114,016	-				-0.6
114,016	-				-1.2
114,016	-				-1.2
114,016	-				-1.5
114,016	-				-0.6
114,016	-				-1.5
114,016	-				-0.6
114,016	-				-1.7
114,016	-				+1.6
114,016	-				-1.5
114,016	-				+1.2
114,044	+				-1.3
114,044	+				-2.2
114,045	-				-0.4
114,176	+		PFLU_RS00555	0.12	-1.6
114,176	+		PFLU_RS00555	0.12	-0.1
114,176	+		PFLU_RS00555	0.12	-0.8
114,176	+		PFLU_RS00555	0.12	-0.5
114,176	+		PFLU_RS00555	0.12	-0.4
114,176	+		PFLU_RS00555	0.12	+0.2
114,176	+		PFLU_RS00555	0.12	-2.6
114,176	+		PFLU_RS00555	0.12	-1.5
114,176	+		PFLU_RS00555	0.12	-1.3
114,176	+		PFLU_RS00555	0.12	-1.5
114,176	+		PFLU_RS00555	0.12	+1.6
114,176	+		PFLU_RS00555	0.12	-3.2
114,176	+		PFLU_RS00555	0.12	-1.0
114,176	+		PFLU_RS00555	0.12	+0.9
114,177	-		PFLU_RS00555	0.12	-0.5
114,177	-		PFLU_RS00555	0.12	-1.4
114,177	-		PFLU_RS00555	0.12	-0.9
114,177	-		PFLU_RS00555	0.12	+0.0
114,177	-		PFLU_RS00555	0.12	-2.7
114,394	-		PFLU_RS00555	0.31	-2.5
114,476	+		PFLU_RS00555	0.39	-2.2
114,476	+		PFLU_RS00555	0.39	-0.7
114,477	-		PFLU_RS00555	0.39	-3.4
114,477	-		PFLU_RS00555	0.39	-1.7
114,477	-		PFLU_RS00555	0.39	-1.5
114,521	+		PFLU_RS00555	0.43	-2.1
114,522	-		PFLU_RS00555	0.43	-0.9
114,664	+		PFLU_RS00555	0.55	-1.2
114,750	+		PFLU_RS00555	0.63	-0.9
114,750	+		PFLU_RS00555	0.63	-2.9
114,750	+		PFLU_RS00555	0.63	-0.9
114,751	-		PFLU_RS00555	0.63	-2.8
114,751	-		PFLU_RS00555	0.63	-2.8
114,751	-		PFLU_RS00555	0.63	-1.7
115,016	+		PFLU_RS00555	0.87	-0.6
115,016	+		PFLU_RS00555	0.87	-1.9
115,017	-		PFLU_RS00555	0.87	+0.1
115,017	-		PFLU_RS00555	0.87	-2.0
115,017	-		PFLU_RS00555	0.87	-0.8
115,017	-		PFLU_RS00555	0.87	-0.8
115,042	+		PFLU_RS00555	0.89	-1.7
115,043	-		PFLU_RS00555	0.89	+0.5
115,060	+				-2.4
115,060	+				-1.7
115,060	+				-2.9
115,060	+				-0.8
115,060	+				-2.3
115,060	+				-2.9
115,060	+				-0.4
115,060	+				-1.4
115,060	+				-1.6
115,060	+				-0.2
115,060	+				+0.1
115,061	-				-3.3
115,061	-				-1.5
115,061	-				-0.8
115,061	-				+0.2
115,061	-				-1.0
115,061	-				-0.4
115,061	-				-1.4
115,061	-				-0.0
115,061	-				-0.7
115,071	+				-1.1
115,071	+				-0.6
115,071	+				-2.6
115,072	-				-0.9
115,072	-				-2.4
115,072	-				-2.8
115,072	-				-0.3
115,305	-				-0.8
115,321	+				+3.5
115,345	+				-1.3
115,345	+				-0.1
115,346	-				+3.0
115,346	-				+1.3
115,375	+				-1.5
115,386	-				+0.3
115,398	+				+2.2
115,398	+				-0.5
115,484	+				-1.0
115,485	-				-0.0
115,485	-				-1.4
115,487	-				+0.2
115,495	+				-2.7
115,495	+				-0.8
115,495	+				+2.2
115,495	+				+0.3
115,496	-				-1.6
115,496	-				-1.5
115,496	-				-0.7
115,496	-				-0.5
115,496	-				-0.6
115,533	-				+0.6
115,533	-				+0.1
115,533	-				-0.4
115,533	-				-1.2
115,554	+				+0.3
115,554	+				-0.6
115,554	+				+1.4
115,555	-				-1.6
115,555	-				-0.4
115,555	-				+2.2
115,555	-				+0.9
115,556	+				+1.4
115,556	+				-0.4
115,556	+				-1.1
115,556	+				+1.0
115,556	+				+1.1
115,557	-				-2.2
115,557	-				-2.4
115,557	-				-1.8
115,557	-				-0.6
115,557	-				-0.1
115,557	-				+1.1
115,557	-				-1.5
115,557	-				+0.6
115,557	-				-1.7
115,557	-				+0.8
115,560	+				+0.1
115,560	+				-1.5
115,560	+				+0.6
115,560	+				+1.3
115,561	-				+0.8
115,561	-				-0.2
115,561	-				-0.9
115,561	-				-1.2
115,561	-				+0.1
115,561	-				+1.6
115,562	+				-1.0
115,563	-				+0.9
115,563	-				+1.2
115,563	-				+0.1
115,568	+				-1.2
115,618	+				+0.2
115,653	-				-2.2
115,714	+		PFLU_RS00560	0.11	-1.1
115,714	+		PFLU_RS00560	0.11	-0.9
115,714	+		PFLU_RS00560	0.11	-1.2
115,714	+		PFLU_RS00560	0.11	-0.3
115,714	+		PFLU_RS00560	0.11	-0.4
115,714	+		PFLU_RS00560	0.11	-0.5
115,714	+		PFLU_RS00560	0.11	-0.4
115,714	+		PFLU_RS00560	0.11	+1.6
115,714	+		PFLU_RS00560	0.11	-2.1
115,714	+		PFLU_RS00560	0.11	-0.7
115,714	+		PFLU_RS00560	0.11	-0.3
115,714	+		PFLU_RS00560	0.11	-1.2
115,714	+		PFLU_RS00560	0.11	+0.8
115,714	+		PFLU_RS00560	0.11	+0.5
115,714	+		PFLU_RS00560	0.11	+0.6
115,714	+		PFLU_RS00560	0.11	+3.4
115,714	+		PFLU_RS00560	0.11	+1.4
115,715	-		PFLU_RS00560	0.11	+2.1
115,715	-		PFLU_RS00560	0.11	-0.7
115,715	-		PFLU_RS00560	0.11	+0.1
115,715	-		PFLU_RS00560	0.11	+0.8
115,715	-		PFLU_RS00560	0.11	+1.1
115,715	-		PFLU_RS00560	0.11	-0.9
115,715	-		PFLU_RS00560	0.11	-1.8
115,715	-		PFLU_RS00560	0.11	+1.4
115,715	-		PFLU_RS00560	0.11	+0.2
115,715	-		PFLU_RS00560	0.11	+2.4
115,715	-		PFLU_RS00560	0.11	-1.4
115,715	-		PFLU_RS00560	0.11	+0.1
115,715	-		PFLU_RS00560	0.11	-1.2
115,717	+		PFLU_RS00560	0.11	+0.6
115,717	+		PFLU_RS00560	0.11	+2.5
115,717	+		PFLU_RS00560	0.11	-0.2
115,717	+		PFLU_RS00560	0.11	-2.7
115,717	+		PFLU_RS00560	0.11	-1.5
115,717	+		PFLU_RS00560	0.11	-0.0
115,717	+		PFLU_RS00560	0.11	+1.8
115,717	+		PFLU_RS00560	0.11	+1.0
115,718	-		PFLU_RS00560	0.11	+0.1
115,718	-		PFLU_RS00560	0.11	-0.4
115,718	-		PFLU_RS00560	0.11	+1.2
115,718	-		PFLU_RS00560	0.11	+0.4
115,718	-		PFLU_RS00560	0.11	-0.6
115,718	-		PFLU_RS00560	0.11	-1.9
115,718	-		PFLU_RS00560	0.11	-2.1
115,718	-		PFLU_RS00560	0.11	-1.2
115,718	-		PFLU_RS00560	0.11	+1.6
115,851	+		PFLU_RS00560	0.26	+0.1
115,851	+		PFLU_RS00560	0.26	+1.2
115,851	+		PFLU_RS00560	0.26	+0.6
115,851	+		PFLU_RS00560	0.26	+1.8
115,851	+		PFLU_RS00560	0.26	+0.8
115,851	+		PFLU_RS00560	0.26	-1.5
115,851	+		PFLU_RS00560	0.26	-0.4
115,851	+		PFLU_RS00560	0.26	-2.2
115,851	+		PFLU_RS00560	0.26	-0.2
115,851	+		PFLU_RS00560	0.26	+1.7
115,851	+		PFLU_RS00560	0.26	+2.4
115,852	-		PFLU_RS00560	0.26	+2.7
115,852	-		PFLU_RS00560	0.26	-0.1
115,852	-		PFLU_RS00560	0.26	-0.2
115,852	-		PFLU_RS00560	0.26	-1.9
115,852	-		PFLU_RS00560	0.26	+0.4
115,859	-		PFLU_RS00560	0.27	-0.5
115,884	+		PFLU_RS00560	0.30	-0.9
115,884	+		PFLU_RS00560	0.30	+0.2
115,884	+		PFLU_RS00560	0.30	-0.6
115,884	+		PFLU_RS00560	0.30	+0.0
115,884	+		PFLU_RS00560	0.30	-1.9
115,884	+		PFLU_RS00560	0.30	-0.3
115,884	+		PFLU_RS00560	0.30	+0.3
115,885	-		PFLU_RS00560	0.30	-1.7
115,885	-		PFLU_RS00560	0.30	+1.2
115,885	-		PFLU_RS00560	0.30	-1.7
115,885	-		PFLU_RS00560	0.30	-2.4
115,924	+		PFLU_RS00560	0.34	-2.0
115,925	-		PFLU_RS00560	0.34	+0.5
115,925	-		PFLU_RS00560	0.34	-0.4
116,080	+		PFLU_RS00560	0.51	+1.7
116,080	+		PFLU_RS00560	0.51	-0.9
116,080	+		PFLU_RS00560	0.51	+2.2
116,080	+		PFLU_RS00560	0.51	-0.8
116,080	+		PFLU_RS00560	0.51	-0.1
116,081	-		PFLU_RS00560	0.52	-1.4
116,081	-		PFLU_RS00560	0.52	+1.1
116,081	-		PFLU_RS00560	0.52	+0.3