Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS00550

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
112,859	+		PFLU_RS00545	0.41	-2.2
112,859	+		PFLU_RS00545	0.41	+1.2
112,859	+		PFLU_RS00545	0.41	-2.5
112,859	+		PFLU_RS00545	0.41	-0.7
112,859	+		PFLU_RS00545	0.41	-1.9
112,859	+		PFLU_RS00545	0.41	-2.6
112,859	+		PFLU_RS00545	0.41	-0.6
112,860	-		PFLU_RS00545	0.41	-2.2
112,860	-		PFLU_RS00545	0.41	-0.4
112,860	-		PFLU_RS00545	0.41	-1.9
112,860	-		PFLU_RS00545	0.41	-2.5
112,860	-		PFLU_RS00545	0.41	-0.8
112,860	-		PFLU_RS00545	0.41	-0.1
112,864	+		PFLU_RS00545	0.41	-2.5
112,894	+		PFLU_RS00545	0.43	-0.9
112,894	+		PFLU_RS00545	0.43	-2.9
112,894	+		PFLU_RS00545	0.43	-2.2
112,894	+		PFLU_RS00545	0.43	-3.3
112,894	+		PFLU_RS00545	0.43	-1.9
112,894	+		PFLU_RS00545	0.43	-1.5
112,894	+		PFLU_RS00545	0.43	-2.3
112,894	+		PFLU_RS00545	0.43	-2.5
112,894	+		PFLU_RS00545	0.43	-0.7
112,894	+		PFLU_RS00545	0.43	-1.0
112,894	+		PFLU_RS00545	0.43	-1.5
112,894	+		PFLU_RS00545	0.43	-1.0
112,894	+		PFLU_RS00545	0.43	-1.9
112,894	+		PFLU_RS00545	0.43	-1.6
112,894	+		PFLU_RS00545	0.43	-0.6
112,894	+		PFLU_RS00545	0.43	-2.7
112,894	+		PFLU_RS00545	0.43	-0.4
112,894	+		PFLU_RS00545	0.43	-3.2
112,894	+		PFLU_RS00545	0.43	-2.5
112,894	+		PFLU_RS00545	0.43	-0.9
112,894	+		PFLU_RS00545	0.43	-1.1
112,894	+		PFLU_RS00545	0.43	-2.5
112,894	+		PFLU_RS00545	0.43	-2.9
112,894	+		PFLU_RS00545	0.43	+1.4
112,894	+		PFLU_RS00545	0.43	-1.4
112,894	+		PFLU_RS00545	0.43	-2.7
112,894	+		PFLU_RS00545	0.43	-0.8
112,894	+		PFLU_RS00545	0.43	-1.9
112,894	+		PFLU_RS00545	0.43	+1.2
112,894	+		PFLU_RS00545	0.43	-1.6
112,895	-		PFLU_RS00545	0.43	+1.2
112,895	-		PFLU_RS00545	0.43	-1.9
112,895	-		PFLU_RS00545	0.43	-2.1
112,895	-		PFLU_RS00545	0.43	-2.1
112,895	-		PFLU_RS00545	0.43	+0.2
112,895	-		PFLU_RS00545	0.43	-0.9
112,895	-		PFLU_RS00545	0.43	-1.3
112,895	-		PFLU_RS00545	0.43	-0.6
112,895	-		PFLU_RS00545	0.43	-1.5
112,895	-		PFLU_RS00545	0.43	-3.7
112,895	-		PFLU_RS00545	0.43	-1.5
112,895	-		PFLU_RS00545	0.43	+0.8
112,895	-		PFLU_RS00545	0.43	+0.2
112,895	-		PFLU_RS00545	0.43	+0.1
112,895	-		PFLU_RS00545	0.43	-2.3
112,895	-		PFLU_RS00545	0.43	+0.6
112,895	-		PFLU_RS00545	0.43	+0.2
112,895	-		PFLU_RS00545	0.43	-2.2
112,895	-		PFLU_RS00545	0.43	-1.6
112,895	-		PFLU_RS00545	0.43	-0.9
112,895	-		PFLU_RS00545	0.43	-1.9
112,895	-		PFLU_RS00545	0.43	-2.5
112,895	-		PFLU_RS00545	0.43	-1.7
112,895	-		PFLU_RS00545	0.43	-2.8
112,895	-		PFLU_RS00545	0.43	-0.6
112,895	-		PFLU_RS00545	0.43	+0.5
112,899	+		PFLU_RS00545	0.44	-3.4
112,899	+		PFLU_RS00545	0.44	-3.5
112,899	+		PFLU_RS00545	0.44	-1.5
112,899	+		PFLU_RS00545	0.44	-0.4
112,899	+		PFLU_RS00545	0.44	-2.6
112,899	+		PFLU_RS00545	0.44	-1.6
112,899	+		PFLU_RS00545	0.44	-0.6
112,899	+		PFLU_RS00545	0.44	-2.1
112,899	+		PFLU_RS00545	0.44	-0.1
112,899	+		PFLU_RS00545	0.44	-2.0
112,899	+		PFLU_RS00545	0.44	-3.0
112,899	+		PFLU_RS00545	0.44	-1.1
112,899	+		PFLU_RS00545	0.44	-1.2
112,900	-		PFLU_RS00545	0.44	-1.1
112,900	-		PFLU_RS00545	0.44	-0.6
112,900	-		PFLU_RS00545	0.44	-1.2
112,900	-		PFLU_RS00545	0.44	-2.5
112,900	-		PFLU_RS00545	0.44	-2.5
112,900	-		PFLU_RS00545	0.44	-2.4
112,900	-		PFLU_RS00545	0.44	-2.1
112,900	-		PFLU_RS00545	0.44	-1.3
112,900	-		PFLU_RS00545	0.44	-1.6
112,900	-		PFLU_RS00545	0.44	-2.2
112,998	+		PFLU_RS00545	0.51	-1.1
112,998	+		PFLU_RS00545	0.51	-1.8
112,998	+		PFLU_RS00545	0.51	-2.1
112,998	+		PFLU_RS00545	0.51	-1.5
112,998	+		PFLU_RS00545	0.51	-2.2
112,998	+		PFLU_RS00545	0.51	-0.8
112,999	-		PFLU_RS00545	0.51	-0.5
112,999	-		PFLU_RS00545	0.51	-0.9
112,999	-		PFLU_RS00545	0.51	-2.7
112,999	-		PFLU_RS00545	0.51	+1.6
112,999	-		PFLU_RS00545	0.51	+0.2
112,999	-		PFLU_RS00545	0.51	-1.1
112,999	-		PFLU_RS00545	0.51	-2.6
112,999	-		PFLU_RS00545	0.51	-3.2
113,223	+		PFLU_RS00545	0.66	-1.8
113,223	+		PFLU_RS00545	0.66	-2.1
113,223	+		PFLU_RS00545	0.66	-0.1
113,223	+		PFLU_RS00545	0.66	-2.5
113,223	+		PFLU_RS00545	0.66	+0.8
113,223	+		PFLU_RS00545	0.66	-1.3
113,224	-		PFLU_RS00545	0.66	-1.3
113,224	-		PFLU_RS00545	0.66	-0.9
113,224	-		PFLU_RS00545	0.66	-3.6
113,224	-		PFLU_RS00545	0.66	-0.9
113,269	+		PFLU_RS00545	0.69	-0.6
113,269	+		PFLU_RS00545	0.69	-2.6
113,269	+		PFLU_RS00545	0.69	+0.2
113,269	+		PFLU_RS00545	0.69	-0.5
113,269	+		PFLU_RS00545	0.69	-2.3
113,269	+		PFLU_RS00545	0.69	-3.0
113,269	+		PFLU_RS00545	0.69	-0.4
113,269	+		PFLU_RS00545	0.69	-2.1
113,269	+		PFLU_RS00545	0.69	-1.4
113,269	+		PFLU_RS00545	0.69	-1.0
113,269	+		PFLU_RS00545	0.69	-1.3
113,269	+		PFLU_RS00545	0.69	-0.8
113,269	+		PFLU_RS00545	0.69	-1.2
113,269	+		PFLU_RS00545	0.69	-2.6
113,269	+		PFLU_RS00545	0.69	+0.3
113,269	+		PFLU_RS00545	0.69	-2.0
113,269	+		PFLU_RS00545	0.69	-1.7
113,270	-		PFLU_RS00545	0.70	-1.4
113,270	-		PFLU_RS00545	0.70	-1.9
113,270	-		PFLU_RS00545	0.70	-2.1
113,270	-		PFLU_RS00545	0.70	-1.5
113,270	-		PFLU_RS00545	0.70	-2.0
113,270	-		PFLU_RS00545	0.70	-0.2
113,386	+		PFLU_RS00545	0.78	+0.3
113,387	-		PFLU_RS00545	0.78	-2.0
113,453	+		PFLU_RS00545	0.82	-1.6
113,453	+		PFLU_RS00545	0.82	-3.2
113,511	+		PFLU_RS00545	0.86	-1.4
113,512	-		PFLU_RS00545	0.86	-2.1
113,512	-		PFLU_RS00545	0.86	-0.4
113,512	-		PFLU_RS00545	0.86	-1.5
113,548	+		PFLU_RS00545	0.89	-1.2
113,548	+		PFLU_RS00545	0.89	+0.4
113,548	+		PFLU_RS00545	0.89	+0.1
113,548	+		PFLU_RS00545	0.89	-2.9
113,548	+		PFLU_RS00545	0.89	-1.9
113,548	+		PFLU_RS00545	0.89	-0.7
113,548	+		PFLU_RS00545	0.89	-1.2
113,549	-		PFLU_RS00545	0.89	-1.6
113,549	-		PFLU_RS00545	0.89	+0.2
113,549	-		PFLU_RS00545	0.89	+0.5
113,549	-		PFLU_RS00545	0.89	-1.5
113,549	-		PFLU_RS00545	0.89	-2.7
113,549	-		PFLU_RS00545	0.89	-0.4
113,549	-		PFLU_RS00545	0.89	-1.1
113,550	+		PFLU_RS00545	0.89	-1.5
113,550	+		PFLU_RS00545	0.89	-1.7
113,550	+		PFLU_RS00545	0.89	-0.7
113,550	+		PFLU_RS00545	0.89	-0.8
113,550	+		PFLU_RS00545	0.89	-1.5
113,550	+		PFLU_RS00545	0.89	-1.6
113,550	+		PFLU_RS00545	0.89	+0.7
113,550	+		PFLU_RS00545	0.89	-0.5
113,550	+		PFLU_RS00545	0.89	-3.0
113,550	+		PFLU_RS00545	0.89	-0.5
113,550	+		PFLU_RS00545	0.89	-1.7
113,550	+		PFLU_RS00545	0.89	-1.3
113,550	+		PFLU_RS00545	0.89	-0.9
113,550	+		PFLU_RS00545	0.89	+0.1
113,550	+		PFLU_RS00545	0.89	-2.1
113,550	+		PFLU_RS00545	0.89	-0.7
113,550	+		PFLU_RS00545	0.89	+0.2
113,551	-		PFLU_RS00545	0.89	+1.6
113,551	-		PFLU_RS00545	0.89	-0.5
113,551	-		PFLU_RS00545	0.89	-1.9
113,551	-		PFLU_RS00545	0.89	-1.2
113,551	-		PFLU_RS00545	0.89	-0.1
113,551	-		PFLU_RS00545	0.89	-2.0
113,551	-		PFLU_RS00545	0.89	-2.5
113,551	-		PFLU_RS00545	0.89	-1.5
113,551	-		PFLU_RS00545	0.89	-1.4
113,551	-		PFLU_RS00545	0.89	-0.8
113,551	-		PFLU_RS00545	0.89	-2.2
113,551	-		PFLU_RS00545	0.89	-3.1
113,551	-		PFLU_RS00545	0.89	-0.6
113,551	-		PFLU_RS00545	0.89	-3.1
113,551	-		PFLU_RS00545	0.89	-1.4
113,551	-		PFLU_RS00545	0.89	+0.8
113,551	-		PFLU_RS00545	0.89	+1.2
113,551	-		PFLU_RS00545	0.89	-0.0
113,569	+				-1.2
113,569	+				-3.1
113,569	+				-1.8
113,569	+				-0.2
113,569	+				+0.1
113,569	+				-2.5
113,570	-				-1.7
113,570	-				+0.6
113,570	-				-0.2
113,570	-				-1.2
113,570	-				-3.3
113,570	-				-3.1
113,570	-				-2.3
113,570	-				-0.8
113,570	-				-0.4
113,570	-				-2.2
113,570	-				-0.6
113,570	-				-2.4
113,573	+				-1.7
113,573	+				-3.2
113,573	+				-0.9
113,574	-				-2.8
113,574	-				-0.9
113,574	-				-1.9
113,574	-				-1.9
113,679	+				-1.1
113,680	-				-0.0
113,680	-				-1.7
113,680	-				-1.4
113,680	-				-0.1
113,690	+				-1.8
113,691	-				-0.6
113,708	+				-2.0
113,708	+				-0.1
113,708	+				-0.1
113,708	+				-1.1
113,708	+				-2.1
113,708	+				-1.3
113,708	+				+0.5
113,709	-				+0.2
113,709	-				-1.2
113,791	+		PFLU_RS00550	0.26	-0.4
113,791	+		PFLU_RS00550	0.26	-1.8
113,791	+		PFLU_RS00550	0.26	-2.1
113,791	+		PFLU_RS00550	0.26	-1.1
113,791	+		PFLU_RS00550	0.26	-2.2
113,792	-		PFLU_RS00550	0.26	-3.7
113,792	-		PFLU_RS00550	0.26	-2.2
113,941	+		PFLU_RS00550	0.73	-0.5
113,942	-		PFLU_RS00550	0.73	-1.6
113,942	-		PFLU_RS00550	0.73	-1.5
113,969	+		PFLU_RS00550	0.82	-2.6
113,969	+		PFLU_RS00550	0.82	-2.3
113,969	+		PFLU_RS00550	0.82	-1.7
113,969	+		PFLU_RS00550	0.82	-1.2
113,969	+		PFLU_RS00550	0.82	-1.1
113,970	-		PFLU_RS00550	0.82	-2.5
113,970	-		PFLU_RS00550	0.82	-1.8
113,970	-		PFLU_RS00550	0.82	-1.2
113,999	+				+0.0
113,999	+				-2.0
113,999	+				+0.1
113,999	+				-1.6
113,999	+				-0.7
113,999	+				-0.8
113,999	+				-0.7
113,999	+				-2.5
113,999	+				-1.1
113,999	+				-1.5
113,999	+				-0.8
113,999	+				-2.8
113,999	+				-0.9
113,999	+				-0.4
113,999	+				-1.7
114,000	-				-1.7
114,000	-				-0.1
114,000	-				-3.2
114,000	-				-1.1
114,000	-				+2.2
114,000	-				-2.9
114,000	-				-1.9
114,004	-				-1.1
114,015	+				-1.1
114,015	+				-3.2
114,015	+				-1.4
114,015	+				-0.6
114,015	+				-0.8
114,015	+				-0.6
114,015	+				-2.4
114,015	+				-1.1
114,015	+				-2.0
114,015	+				-3.7
114,015	+				-0.2
114,015	+				-1.7
114,015	+				-2.6
114,015	+				-1.4
114,015	+				+0.0
114,016	-				+0.6
114,016	-				+0.4
114,016	-				+1.0
114,016	-				-2.2
114,016	-				-2.2
114,016	-				+0.4
114,016	-				+0.6
114,016	-				-0.9
114,016	-				-0.6
114,016	-				-1.2
114,016	-				-1.2
114,016	-				-1.5
114,016	-				-0.6
114,016	-				-1.5
114,016	-				-0.6
114,016	-				-1.7
114,016	-				+1.6
114,016	-				-1.5
114,016	-				+1.2
114,044	+				-1.3
114,044	+				-2.2
114,045	-				-0.4
114,176	+		PFLU_RS00555	0.12	-1.6
114,176	+		PFLU_RS00555	0.12	-0.1
114,176	+		PFLU_RS00555	0.12	-0.8
114,176	+		PFLU_RS00555	0.12	-0.5
114,176	+		PFLU_RS00555	0.12	-0.4
114,176	+		PFLU_RS00555	0.12	+0.2
114,176	+		PFLU_RS00555	0.12	-2.6
114,176	+		PFLU_RS00555	0.12	-1.5
114,176	+		PFLU_RS00555	0.12	-1.3
114,176	+		PFLU_RS00555	0.12	-1.5
114,176	+		PFLU_RS00555	0.12	+1.6
114,176	+		PFLU_RS00555	0.12	-3.2
114,176	+		PFLU_RS00555	0.12	-1.0
114,176	+		PFLU_RS00555	0.12	+0.9
114,177	-		PFLU_RS00555	0.12	-0.5
114,177	-		PFLU_RS00555	0.12	-1.4
114,177	-		PFLU_RS00555	0.12	-0.9
114,177	-		PFLU_RS00555	0.12	+0.0
114,177	-		PFLU_RS00555	0.12	-2.7
114,394	-		PFLU_RS00555	0.31	-2.5
114,476	+		PFLU_RS00555	0.39	-2.2
114,476	+		PFLU_RS00555	0.39	-0.7
114,477	-		PFLU_RS00555	0.39	-3.4
114,477	-		PFLU_RS00555	0.39	-1.7
114,477	-		PFLU_RS00555	0.39	-1.5
114,521	+		PFLU_RS00555	0.43	-2.1
114,522	-		PFLU_RS00555	0.43	-0.9
114,664	+		PFLU_RS00555	0.55	-1.2
114,750	+		PFLU_RS00555	0.63	-0.9
114,750	+		PFLU_RS00555	0.63	-2.9
114,750	+		PFLU_RS00555	0.63	-0.9
114,751	-		PFLU_RS00555	0.63	-2.8
114,751	-		PFLU_RS00555	0.63	-2.8
114,751	-		PFLU_RS00555	0.63	-1.7
115,016	+		PFLU_RS00555	0.87	-0.6
115,016	+		PFLU_RS00555	0.87	-1.9
115,017	-		PFLU_RS00555	0.87	+0.1
115,017	-		PFLU_RS00555	0.87	-2.0
115,017	-		PFLU_RS00555	0.87	-0.8
115,017	-		PFLU_RS00555	0.87	-0.8