Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12530

Experiment: RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
2,616,259	-		BWI76_RS12525	0.45	-0.6
2,616,323	-		BWI76_RS12525	0.49	-0.3
2,616,343	-		BWI76_RS12525	0.50	-0.6
2,616,353	-		BWI76_RS12525	0.51	-0.0
2,616,384	-		BWI76_RS12525	0.53	+0.2
2,616,475	-		BWI76_RS12525	0.58	-0.5
2,616,514	+		BWI76_RS12525	0.61	-0.3
2,616,523	-		BWI76_RS12525	0.61	-0.3
2,616,619	-		BWI76_RS12525	0.67	-0.0
2,616,702	-		BWI76_RS12525	0.72	+0.3
2,616,744	-		BWI76_RS12525	0.74	-0.6
2,616,776	-		BWI76_RS12525	0.76	+0.8
2,616,793	+		BWI76_RS12525	0.77	-1.5
2,616,801	-		BWI76_RS12525	0.78	-0.2
2,616,806	+		BWI76_RS12525	0.78	-2.5
2,616,814	-		BWI76_RS12525	0.78	+0.7
2,616,907	+		BWI76_RS12525	0.84	+1.1
2,616,907	+		BWI76_RS12525	0.84	+1.5
2,616,915	-		BWI76_RS12525	0.84	+0.4
2,616,916	-		BWI76_RS12525	0.84	+0.7
2,616,933	+		BWI76_RS12525	0.85	-1.7
2,616,961	-		BWI76_RS12525	0.87	-0.5
2,617,067	+				+0.1
2,617,075	-				+1.7
2,617,187	-				+0.1
2,617,187	-				+0.1
2,617,239	+				-0.1
2,617,261	+				-0.5
2,617,300	-				-0.6
2,617,325	-				-1.4
2,617,337	+				+0.4
2,617,547	-		BWI76_RS12530	0.22	+0.3
2,617,565	-		BWI76_RS12530	0.23	+1.1
2,617,566	-		BWI76_RS12530	0.23	+1.9
2,617,590	+				+1.1
2,617,590	+		BWI76_RS12530	0.24	+0.1
2,617,598	-		BWI76_RS12530	0.25	-0.4
2,617,598	-		BWI76_RS12530	0.25	-0.9
2,617,631	-		BWI76_RS12530	0.27	-1.2
2,617,638	-		BWI76_RS12530	0.28	+0.4
2,617,649	-		BWI76_RS12530	0.29	+0.2
2,617,787	+		BWI76_RS12530	0.38	-0.0
2,617,787	+		BWI76_RS12530	0.38	-0.5
2,617,800	-		BWI76_RS12530	0.39	+0.7
2,617,815	-		BWI76_RS12530	0.40	-1.1
2,617,831	+		BWI76_RS12530	0.41	-0.1
2,617,839	-				+1.1
2,617,889	+		BWI76_RS12530	0.45	-0.8
2,617,937	+		BWI76_RS12530	0.48	+1.1
2,617,956	+		BWI76_RS12530	0.50	-0.7
2,617,964	-		BWI76_RS12530	0.50	-1.9
2,617,964	-		BWI76_RS12530	0.50	-1.9
2,617,997	-		BWI76_RS12530	0.52	-1.0
2,618,015	+		BWI76_RS12530	0.54	-0.7
2,618,118	+		BWI76_RS12530	0.61	-1.9
2,618,126	-		BWI76_RS12530	0.61	-0.8
2,618,126	-		BWI76_RS12530	0.61	-1.2
2,618,169	+		BWI76_RS12530	0.64	-1.2
2,618,169	+		BWI76_RS12530	0.64	-2.3
2,618,169	+		BWI76_RS12530	0.64	+0.3
2,618,169	+		BWI76_RS12530	0.64	+0.8
2,618,185	-		BWI76_RS12530	0.65	-2.5
2,618,192	+		BWI76_RS12530	0.66	-0.5
2,618,197	+		BWI76_RS12530	0.66	-0.5
2,618,200	-		BWI76_RS12530	0.66	+0.7
2,618,248	+		BWI76_RS12530	0.70	-0.0
2,618,349	+		BWI76_RS12530	0.77	+0.7
2,618,357	-		BWI76_RS12530	0.77	+1.8
2,618,397	+		BWI76_RS12530	0.80	-2.0
2,618,405	-		BWI76_RS12530	0.80	-1.7
2,618,405	-		BWI76_RS12530	0.80	+0.5
2,618,413	-		BWI76_RS12530	0.81	-0.1
2,618,454	+		BWI76_RS12530	0.84	-0.1
2,618,531	-		BWI76_RS12530	0.89	-2.0
2,618,541	-		BWI76_RS12530	0.90	-1.2
2,618,687	+				-1.9
2,618,695	-				+1.1
2,618,706	+				-0.5
2,618,709	-				-0.2
2,618,709	-				+2.1
2,618,711	-				+1.1
2,618,714	-				+1.5
2,618,714	-				+0.3
2,618,714	-				-3.0
2,618,826	-				+0.1
2,618,869	-				+0.5
2,618,869	-				-0.9
2,618,869	-				-0.7
2,618,998	+				+1.1
2,618,998	+				+0.5
2,618,998	+				+0.1
2,619,006	-				+0.7
2,619,056	+				-0.2
2,619,064	-				+0.1
2,619,118	+				+1.7
2,619,118	+				-1.1
2,619,118	+				+0.4
2,619,118	+				+1.1
2,619,118	+				+0.7
2,619,118	+				+2.5
2,619,118	+				+0.6
2,619,118	+				-1.5
2,619,118	+				+0.3
2,619,118	+				-1.6
2,619,118	+				+1.3
2,619,118	+				-0.5
2,619,120	+				-0.8
2,619,120	+				+0.5
2,619,123	+		BWI76_RS12535	0.11	+1.1
2,619,123	+		BWI76_RS12535	0.11	+0.9
2,619,123	+		BWI76_RS12535	0.11	+0.3
2,619,126	-		BWI76_RS12535	0.12	-0.6
2,619,128	+		BWI76_RS12535	0.13	-0.3
2,619,168	+		BWI76_RS12535	0.33	+1.2
2,619,168	+		BWI76_RS12535	0.33	-2.0
2,619,181	+		BWI76_RS12535	0.39	-0.5
2,619,235	+		BWI76_RS12535	0.66	+1.1
2,619,235	+		BWI76_RS12535	0.66	-0.5
2,619,265	+		BWI76_RS12535	0.80	+0.4
2,619,267	-		BWI76_RS12535	0.81	-0.9
2,619,267	-		BWI76_RS12535	0.81	-2.5
2,619,279	+		BWI76_RS12535	0.87	-0.9
2,619,279	+		BWI76_RS12535	0.87	-2.5
2,619,279	+		BWI76_RS12535	0.87	-2.5
2,619,282	-				+1.1
2,619,436	-				+0.1
2,619,450	-				-1.5
2,619,497	+				-1.7
2,619,622	+				+0.1
2,619,623	+				+0.0
2,619,631	+				+0.1
2,619,633	+				-1.7
2,619,633	+				+0.5
2,619,633	+				+1.0
2,619,633	+				+0.3
2,619,633	+				+2.3
2,619,633	+				+1.1
2,619,633	+				-1.4
2,619,633	+				-0.5
2,619,633	+				-0.9
2,619,633	+				+0.0
2,619,634	+				-0.2
2,619,641	-				-0.9
2,619,641	-				+1.1
2,619,641	-				-2.7
2,619,641	-				-1.2
2,619,654	-				+3.1
2,619,679	-				-0.8
2,619,679	-				-0.5