Experiment: RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26625 and BWI76_RS26630 are separated by 37 nucleotides BWI76_RS26630 and BWI76_RS26635 are separated by 111 nucleotides BWI76_RS26635 and BWI76_RS26640 are separated by 221 nucleotides BWI76_RS26640 and BWI76_RS26645 are separated by 9 nucleotides
BWI76_RS26625: BWI76_RS26625 - gluconate transporter periplasmic gluconate-binding protein, at 5,512,335 to 5,513,009
_RS26625
BWI76_RS26630: BWI76_RS26630 - pimeloyl-[acyl-carrier protein] methyl ester esterase, at 5,513,047 to 5,513,829
_RS26630
BWI76_RS26635: BWI76_RS26635 - hypothetical protein, at 5,513,941 to 5,514,210
_RS26635
BWI76_RS26640: BWI76_RS26640 - ferrous iron transporter FeoC, at 5,514,432 to 5,514,668
_RS26640
BWI76_RS26645: BWI76_RS26645 - ferrous iron transporter B, at 5,514,678 to 5,516,996
_RS26645
Position (kb) 5513
5514
5515 Strain fitness (log2 ratio) -2
-1
0
1 at 5513.030 kb on + strand at 5513.108 kb on + strand at 5513.138 kb on + strand, within BWI76_RS26630 at 5513.141 kb on - strand, within BWI76_RS26630 at 5513.324 kb on - strand, within BWI76_RS26630 at 5513.375 kb on + strand, within BWI76_RS26630 at 5513.524 kb on + strand, within BWI76_RS26630 at 5513.669 kb on + strand, within BWI76_RS26630 at 5513.797 kb on + strand at 5513.930 kb on + strand at 5513.984 kb on + strand, within BWI76_RS26635 at 5513.988 kb on + strand, within BWI76_RS26635 at 5513.996 kb on - strand, within BWI76_RS26635 at 5514.244 kb on + strand at 5514.298 kb on + strand at 5514.608 kb on - strand, within BWI76_RS26640 at 5514.764 kb on - strand at 5514.869 kb on - strand at 5514.999 kb on + strand, within BWI76_RS26645 at 5515.000 kb on + strand, within BWI76_RS26645 at 5515.007 kb on - strand, within BWI76_RS26645 at 5515.071 kb on + strand, within BWI76_RS26645 at 5515.117 kb on - strand, within BWI76_RS26645 at 5515.117 kb on - strand, within BWI76_RS26645 at 5515.180 kb on - strand, within BWI76_RS26645
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 5,513,030 + +0.5 5,513,108 + +0.3 5,513,138 + BWI76_RS26630 0.12 +0.2 5,513,141 - BWI76_RS26630 0.12 +0.0 5,513,324 - BWI76_RS26630 0.35 -2.1 5,513,375 + BWI76_RS26630 0.42 +0.1 5,513,524 + BWI76_RS26630 0.61 +1.1 5,513,669 + BWI76_RS26630 0.79 +0.3 5,513,797 + -0.5 5,513,930 + +1.7 5,513,984 + BWI76_RS26635 0.16 -0.1 5,513,988 + BWI76_RS26635 0.17 -2.3 5,513,996 - BWI76_RS26635 0.20 -1.5 5,514,244 + +0.1 5,514,298 + -1.6 5,514,608 - BWI76_RS26640 0.74 +0.7 5,514,764 - +0.2 5,514,869 - -1.9 5,514,999 + BWI76_RS26645 0.14 -0.9 5,515,000 + BWI76_RS26645 0.14 -0.5 5,515,007 - BWI76_RS26645 0.14 -0.0 5,515,071 + BWI76_RS26645 0.17 -0.1 5,515,117 - BWI76_RS26645 0.19 +0.1 5,515,117 - BWI76_RS26645 0.19 -2.0 5,515,180 - BWI76_RS26645 0.22 +0.1
Or see this region's nucleotide sequence