Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13700

Experiment: RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
2,857,721	+				-0.3
2,857,729	-		BWI76_RS13690	0.62	-0.4
2,857,889	+		BWI76_RS13690	0.76	+0.2
2,857,978	+		BWI76_RS13690	0.84	+0.0
2,857,978	+		BWI76_RS13690	0.84	-0.3
2,857,978	+		BWI76_RS13690	0.84	+0.6
2,858,003	-		BWI76_RS13690	0.87	+0.2
2,858,022	+		BWI76_RS13690	0.88	+0.3
2,858,059	+				-0.6
2,858,067	-				-0.5
2,858,077	-				-0.3
2,858,082	-				+0.1
2,858,082	-				-0.8
2,858,100	-				-1.8
2,858,104	+				-0.1
2,858,104	+				-0.5
2,858,104	+				+1.1
2,858,104	+				-0.6
2,858,104	+				-1.6
2,858,104	+				-0.3
2,858,112	-				+0.8
2,858,112	-				+0.5
2,858,114	+				+0.0
2,858,115	+				+0.7
2,858,117	-				-1.6
2,858,122	-				-1.4
2,858,123	-				+0.5
2,858,123	-				-2.2
2,858,148	+				-1.3
2,858,148	+				+0.7
2,858,148	+				-1.4
2,858,156	-				-1.9
2,858,156	-				-2.4
2,858,156	-				+0.1
2,858,156	-				+1.7
2,858,156	-				-2.9
2,858,156	-				+1.1
2,858,156	-				-1.4
2,858,156	-				-2.8
2,858,167	-				-2.4
2,858,171	+				-0.1
2,858,179	-				-3.2
2,858,230	+		BWI76_RS13695	0.22	-1.9
2,858,238	-		BWI76_RS13695	0.25	-0.3
2,858,264	+		BWI76_RS13695	0.34	-0.9
2,858,270	+		BWI76_RS13695	0.36	-3.9
2,858,270	+		BWI76_RS13695	0.36	+0.1
2,858,278	-		BWI76_RS13695	0.38	-1.1
2,858,310	+		BWI76_RS13695	0.49	+0.7
2,858,419	+		BWI76_RS13695	0.87	-0.6
2,858,419	+		BWI76_RS13695	0.87	+0.5
2,858,419	+		BWI76_RS13695	0.87	-2.2
2,858,419	+		BWI76_RS13695	0.87	-2.9
2,858,419	+		BWI76_RS13695	0.87	+0.4
2,858,419	+		BWI76_RS13695	0.87	-2.3
2,858,419	+		BWI76_RS13695	0.87	+1.7
2,858,419	+		BWI76_RS13695	0.87	-0.1
2,858,419	+				+0.7
2,858,419	+		BWI76_RS13695	0.87	-1.5
2,858,419	+		BWI76_RS13695	0.87	-0.1
2,858,419	+		BWI76_RS13695	0.87	+0.1
2,858,419	+		BWI76_RS13695	0.87	-1.7
2,858,419	+		BWI76_RS13695	0.87	+0.1
2,858,419	+		BWI76_RS13695	0.87	+1.1
2,858,421	+		BWI76_RS13695	0.88	+0.7
2,858,421	+		BWI76_RS13695	0.88	-0.4
2,858,547	+				+0.3
2,858,547	+				+1.7
2,858,547	+				+0.7
2,858,547	+				+0.7
2,858,547	+				-2.6
2,858,547	+				+0.1
2,858,555	-				+0.7
2,858,645	-		BWI76_RS13700	0.13	-1.4
2,858,665	+		BWI76_RS13700	0.15	-1.1
2,858,678	+		BWI76_RS13700	0.16	+0.7
2,858,686	+		BWI76_RS13700	0.17	-0.3
2,858,688	+		BWI76_RS13700	0.17	+0.1
2,858,694	-		BWI76_RS13700	0.18	+0.7
2,858,696	-		BWI76_RS13700	0.18	+0.1
2,858,745	+		BWI76_RS13700	0.24	-0.3
2,858,762	+		BWI76_RS13700	0.25	-2.8
2,858,764	-		BWI76_RS13700	0.26	+0.7
2,858,772	-		BWI76_RS13700	0.26	-0.2
2,858,774	+		BWI76_RS13700	0.27	+0.9
2,858,782	-		BWI76_RS13700	0.28	+0.7
2,858,787	-		BWI76_RS13700	0.28	+1.7
2,858,882	-		BWI76_RS13700	0.38	-0.7
2,858,940	+		BWI76_RS13700	0.45	+1.5
2,858,950	+		BWI76_RS13700	0.46	-0.9
2,858,958	-		BWI76_RS13700	0.46	-0.9
2,858,996	+		BWI76_RS13700	0.51	-0.2
2,859,041	+		BWI76_RS13700	0.55	+1.7
2,859,049	-		BWI76_RS13700	0.56	-0.1
2,859,055	-		BWI76_RS13700	0.57	+1.3
2,859,056	+		BWI76_RS13700	0.57	+0.0
2,859,106	-		BWI76_RS13700	0.62	-0.9
2,859,106	-		BWI76_RS13700	0.62	+0.7
2,859,106	-		BWI76_RS13700	0.62	-0.3
2,859,232	+		BWI76_RS13700	0.76	-1.1
2,859,290	+		BWI76_RS13700	0.82	-1.4
2,859,311	+		BWI76_RS13700	0.85	-0.1
2,859,334	-		BWI76_RS13700	0.87	-0.3
2,859,354	+		BWI76_RS13700	0.89	+0.7
2,859,382	+				-0.3
2,859,383	+				-1.5
2,859,383	+				+4.0
2,859,391	-				-0.2
2,859,391	-				+0.7
2,859,393	+				+0.1
2,859,393	+				+0.0
2,859,393	+				-0.8
2,859,393	+				-0.5
2,859,393	+				-1.7
2,859,393	+				-0.7
2,859,393	+				-0.2
2,859,402	+				-1.9
2,859,402	+				+1.7
2,859,402	+				+1.7
2,859,402	+				+1.7
2,859,413	+				-1.2
2,859,421	-				+1.7
2,859,421	-				+0.1
2,859,428	+				+0.5
2,859,428	+				+1.7
2,859,428	+				+1.3
2,859,428	+				-1.4
2,859,428	+				+1.7
2,859,428	+				+0.1
2,859,428	+				-2.0
2,859,428	+				-0.4
2,859,428	+				-0.6
2,859,428	+				+0.3
2,859,428	+				-0.8
2,859,428	+				-2.4
2,859,428	+				-0.3
2,859,435	+				+0.6
2,859,436	-				-1.0
2,859,440	-				+0.7
2,859,447	+				-0.6
2,859,447	+				+0.1
2,859,447	+				-0.9
2,859,460	+				-0.1
2,859,460	+				-0.0
2,859,540	+				+0.7
2,859,540	+				-2.1
2,859,548	-				-0.1
2,859,557	-				+0.6
2,859,557	-				-0.8
2,859,557	-				-0.9
2,859,719	-		BWI76_RS13705	0.12	-1.6
2,859,726	-		BWI76_RS13705	0.12	-1.0
2,859,726	-		BWI76_RS13705	0.12	+0.1
2,859,739	-		BWI76_RS13705	0.13	-0.6
2,859,741	+		BWI76_RS13705	0.13	+0.4
2,859,741	+		BWI76_RS13705	0.13	-0.1
2,859,741	+				+1.7
2,859,741	+				+0.7
2,859,749	-		BWI76_RS13705	0.14	-0.9
2,859,749	-		BWI76_RS13705	0.14	+0.7
2,859,749	-		BWI76_RS13705	0.14	+1.9
2,859,750	+		BWI76_RS13705	0.14	-0.0
2,859,756	-		BWI76_RS13705	0.14	-1.4
2,859,757	+		BWI76_RS13705	0.14	+0.1
2,859,757	+		BWI76_RS13705	0.14	+0.4
2,859,765	-		BWI76_RS13705	0.15	-1.1
2,859,765	-		BWI76_RS13705	0.15	+0.7
2,859,810	+		BWI76_RS13705	0.18	+0.8
2,859,817	-		BWI76_RS13705	0.19	-0.7
2,859,823	+		BWI76_RS13705	0.19	+2.1
2,859,828	+		BWI76_RS13705	0.19	+1.9
2,859,828	+		BWI76_RS13705	0.19	-0.0
2,859,828	-		BWI76_RS13705	0.19	+0.7
2,859,848	-				+2.7
2,859,896	-		BWI76_RS13705	0.24	+1.0
2,859,910	+		BWI76_RS13705	0.25	+0.3
2,859,946	+		BWI76_RS13705	0.28	+0.3
2,859,954	+		BWI76_RS13705	0.29	+1.0
2,859,972	-		BWI76_RS13705	0.30	-0.0
2,859,974	+		BWI76_RS13705	0.30	-2.4
2,859,974	+		BWI76_RS13705	0.30	-0.3
2,859,974	+		BWI76_RS13705	0.30	-0.6
2,859,974	+		BWI76_RS13705	0.30	+0.1
2,859,974	+		BWI76_RS13705	0.30	+0.5
2,859,982	-		BWI76_RS13705	0.31	-0.3
2,859,982	-		BWI76_RS13705	0.31	+1.7
2,859,982	-		BWI76_RS13705	0.31	+0.4
2,859,982	-		BWI76_RS13705	0.31	-1.9
2,859,982	-		BWI76_RS13705	0.31	+0.7
2,859,982	-		BWI76_RS13705	0.31	+1.5
2,859,989	+		BWI76_RS13705	0.31	-1.1
2,859,997	-		BWI76_RS13705	0.32	-1.1
2,860,049	-		BWI76_RS13705	0.35	-0.1
2,860,050	+		BWI76_RS13705	0.36	+1.1
2,860,055	+				-0.6
2,860,136	+		BWI76_RS13705	0.42	+0.1
2,860,137	+		BWI76_RS13705	0.42	-0.9
2,860,144	-		BWI76_RS13705	0.42	-1.0
2,860,154	-		BWI76_RS13705	0.43	-1.6