Experiment: RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06845 and BWI76_RS06850 are separated by 63 nucleotides BWI76_RS06850 and BWI76_RS06855 are separated by 42 nucleotides
BWI76_RS06845: BWI76_RS06845 - ferrochelatase, at 1,435,921 to 1,436,883
_RS06845
BWI76_RS06850: BWI76_RS06850 - inosine/guanosine kinase, at 1,436,947 to 1,438,251
_RS06850
BWI76_RS06855: BWI76_RS06855 - Kef family K(+) transporter, at 1,438,294 to 1,439,970
_RS06855
Position (kb)
1436
1437
1438
1439 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1437.121 kb on + strand, within BWI76_RS06850 at 1437.245 kb on - strand, within BWI76_RS06850 at 1437.277 kb on + strand, within BWI76_RS06850 at 1437.352 kb on - strand, within BWI76_RS06850 at 1437.401 kb on + strand, within BWI76_RS06850 at 1437.625 kb on - strand, within BWI76_RS06850 at 1437.837 kb on + strand, within BWI76_RS06850 at 1438.390 kb on + strand at 1438.539 kb on - strand, within BWI76_RS06855 at 1438.581 kb on - strand, within BWI76_RS06855 at 1438.659 kb on - strand, within BWI76_RS06855 at 1438.767 kb on + strand, within BWI76_RS06855 at 1438.815 kb on + strand, within BWI76_RS06855 at 1438.963 kb on + strand, within BWI76_RS06855 at 1438.963 kb on + strand, within BWI76_RS06855 at 1438.971 kb on - strand, within BWI76_RS06855 at 1438.971 kb on - strand, within BWI76_RS06855 at 1438.971 kb on - strand, within BWI76_RS06855 at 1439.116 kb on + strand, within BWI76_RS06855 at 1439.160 kb on - strand, within BWI76_RS06855 at 1439.238 kb on + strand, within BWI76_RS06855
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 1,437,121 + BWI76_RS06850 0.13 +0.6 1,437,245 - BWI76_RS06850 0.23 -1.0 1,437,277 + BWI76_RS06850 0.25 +1.0 1,437,352 - BWI76_RS06850 0.31 -2.0 1,437,401 + BWI76_RS06850 0.35 -0.4 1,437,625 - BWI76_RS06850 0.52 -0.9 1,437,837 + BWI76_RS06850 0.68 +0.6 1,438,390 + -3.4 1,438,539 - BWI76_RS06855 0.15 +1.2 1,438,581 - BWI76_RS06855 0.17 +0.1 1,438,659 - BWI76_RS06855 0.22 -2.0 1,438,767 + BWI76_RS06855 0.28 +1.8 1,438,815 + BWI76_RS06855 0.31 -0.2 1,438,963 + BWI76_RS06855 0.40 +0.5 1,438,963 + BWI76_RS06855 0.40 +1.1 1,438,971 - BWI76_RS06855 0.40 +0.0 1,438,971 - BWI76_RS06855 0.40 -0.8 1,438,971 - BWI76_RS06855 0.40 +0.1 1,439,116 + BWI76_RS06855 0.49 -0.3 1,439,160 - BWI76_RS06855 0.52 -0.0 1,439,238 + BWI76_RS06855 0.56 +0.4
Or see this region's nucleotide sequence