Experiment: RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03580 and BWI76_RS03585 are separated by 15 nucleotides BWI76_RS03585 and BWI76_RS03590 are separated by 26 nucleotides
BWI76_RS03580: BWI76_RS03580 - iron-containing alcohol dehydrogenase, at 742,866 to 744,008
_RS03580
BWI76_RS03585: BWI76_RS03585 - ethanolamine utilization protein EutN, at 744,024 to 744,281
_RS03585
BWI76_RS03590: BWI76_RS03590 - acetaldehyde dehydrogenase (acetylating), at 744,308 to 745,909
_RS03590
Position (kb) 744
745 Strain fitness (log2 ratio) -2
-1
0
1
2 at 743.040 kb on + strand, within BWI76_RS03580 at 743.073 kb on - strand, within BWI76_RS03580 at 743.102 kb on - strand, within BWI76_RS03580 at 743.292 kb on + strand, within BWI76_RS03580 at 743.655 kb on + strand, within BWI76_RS03580 at 743.685 kb on + strand, within BWI76_RS03580 at 743.858 kb on + strand, within BWI76_RS03580 at 744.070 kb on + strand, within BWI76_RS03585 at 744.070 kb on + strand, within BWI76_RS03585 at 744.070 kb on + strand, within BWI76_RS03585 at 744.120 kb on + strand, within BWI76_RS03585 at 744.617 kb on - strand, within BWI76_RS03590 at 744.653 kb on + strand, within BWI76_RS03590 at 744.653 kb on + strand, within BWI76_RS03590 at 744.658 kb on + strand, within BWI76_RS03590 at 744.779 kb on + strand, within BWI76_RS03590 at 744.787 kb on + strand, within BWI76_RS03590 at 744.937 kb on + strand, within BWI76_RS03590 at 744.984 kb on - strand, within BWI76_RS03590 at 745.253 kb on - strand, within BWI76_RS03590
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 743,040 + BWI76_RS03580 0.15 +0.5 743,073 - BWI76_RS03580 0.18 +2.0 743,102 - BWI76_RS03580 0.21 +1.2 743,292 + BWI76_RS03580 0.37 +0.6 743,655 + BWI76_RS03580 0.69 -0.2 743,685 + BWI76_RS03580 0.72 +0.4 743,858 + BWI76_RS03580 0.87 -0.4 744,070 + BWI76_RS03585 0.18 -1.7 744,070 + BWI76_RS03585 0.18 -0.1 744,070 + BWI76_RS03585 0.18 +0.0 744,120 + BWI76_RS03585 0.37 -1.0 744,617 - BWI76_RS03590 0.19 +1.0 744,653 + BWI76_RS03590 0.22 -0.3 744,653 + BWI76_RS03590 0.22 -0.9 744,658 + BWI76_RS03590 0.22 +1.0 744,779 + BWI76_RS03590 0.29 +0.9 744,787 + BWI76_RS03590 0.30 +0.3 744,937 + BWI76_RS03590 0.39 -2.0 744,984 - BWI76_RS03590 0.42 -1.2 745,253 - BWI76_RS03590 0.59 -0.2
Or see this region's nucleotide sequence