Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08680

Experiment: RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
1,829,276	+		BWI76_RS08675	0.49	+0.9
1,829,351	+		BWI76_RS08675	0.54	-0.1
1,829,359	-		BWI76_RS08675	0.55	-0.2
1,829,359	-		BWI76_RS08675	0.55	-0.6
1,829,392	+		BWI76_RS08675	0.57	+0.6
1,829,400	-		BWI76_RS08675	0.58	+0.1
1,829,418	-		BWI76_RS08675	0.59	-0.9
1,829,505	-		BWI76_RS08675	0.65	+0.4
1,829,505	-				+0.6
1,829,519	+		BWI76_RS08675	0.66	+0.3
1,829,662	+		BWI76_RS08675	0.75	-0.1
1,829,670	-		BWI76_RS08675	0.76	-0.0
1,829,703	+		BWI76_RS08675	0.78	-0.2
1,829,832	-		BWI76_RS08675	0.87	+0.8
1,829,866	-		BWI76_RS08675	0.89	-1.0
1,829,880	-				+0.5
1,829,893	+				-0.2
1,829,893	+				-0.2
1,829,908	+				-0.4
1,829,974	+				-0.7
1,829,977	-				+0.6
1,829,982	+				+0.2
1,829,989	-				-2.0
1,830,008	+				+0.3
1,830,015	+				-0.6
1,830,016	-				-0.6
1,830,021	-				+0.0
1,830,026	-				-2.0
1,830,038	-				-0.4
1,830,056	+				+0.6
1,830,074	+				-0.4
1,830,126	+				-0.4
1,830,175	-				-1.6
1,830,233	+				-1.1
1,830,233	+				-0.5
1,830,233	+				-1.2
1,830,233	+				+0.6
1,830,233	+				-1.0
1,830,233	+				+2.2
1,830,241	-				-0.4
1,830,241	-				-0.6
1,830,241	-				+0.3
1,830,241	-				-0.1
1,830,241	-				-0.2
1,830,241	-				+0.1
1,830,241	-				-2.1
1,830,241	-				+0.0
1,830,279	-				-0.8
1,830,310	+		BWI76_RS08680	0.20	-3.0
1,830,318	-		BWI76_RS08680	0.23	-0.1
1,830,318	-		BWI76_RS08680	0.23	-2.4
1,830,318	-		BWI76_RS08680	0.23	-0.4
1,830,318	-		BWI76_RS08680	0.23	-0.4
1,830,318	-		BWI76_RS08680	0.23	-1.2
1,830,318	-		BWI76_RS08680	0.23	-0.7
1,830,318	-		BWI76_RS08680	0.23	-1.1
1,830,343	-		BWI76_RS08680	0.32	+0.3
1,830,385	-		BWI76_RS08680	0.48	-1.2
1,830,385	-		BWI76_RS08680	0.48	-1.6
1,830,395	+		BWI76_RS08680	0.52	-2.8
1,830,395	+		BWI76_RS08680	0.52	+1.6
1,830,395	-		BWI76_RS08680	0.52	+0.5
1,830,400	+		BWI76_RS08680	0.54	-0.3
1,830,403	-		BWI76_RS08680	0.55	+0.1
1,830,468	+		BWI76_RS08680	0.79	+0.4
1,830,488	+		BWI76_RS08680	0.87	-2.7
1,830,488	+		BWI76_RS08680	0.87	-2.2
1,830,496	-		BWI76_RS08680	0.90	-1.7
1,830,496	-		BWI76_RS08680	0.90	+0.3
1,830,496	-		BWI76_RS08680	0.90	-0.1
1,830,496	-		BWI76_RS08680	0.90	-1.9
1,830,496	-		BWI76_RS08680	0.90	-0.2
1,830,517	+				-1.2
1,830,519	+				-2.0
1,830,527	-				-1.0
1,830,532	-				-1.3
1,830,547	-				-1.2
1,830,584	-				-0.5
1,830,661	-		BWI76_RS08685	0.26	-1.1
1,830,696	-		BWI76_RS08685	0.36	+0.4
1,830,696	-		BWI76_RS08685	0.36	+0.0
1,830,696	-		BWI76_RS08685	0.36	+0.7
1,830,696	-		BWI76_RS08685	0.36	-1.1
1,830,696	-		BWI76_RS08685	0.36	+0.1
1,830,696	-		BWI76_RS08685	0.36	-3.6
1,830,696	-		BWI76_RS08685	0.36	+0.3
1,830,696	-		BWI76_RS08685	0.36	+0.1
1,830,704	-		BWI76_RS08685	0.39	-0.0
1,830,729	-		BWI76_RS08685	0.47	-0.2
1,830,730	-		BWI76_RS08685	0.47	+0.7
1,830,730	-		BWI76_RS08685	0.47	-0.4
1,830,730	-		BWI76_RS08685	0.47	-0.7
1,830,730	-		BWI76_RS08685	0.47	-0.0
1,830,730	-		BWI76_RS08685	0.47	-1.2
1,830,753	+		BWI76_RS08685	0.54	-1.0
1,830,761	-		BWI76_RS08685	0.56	-0.3
1,830,766	-		BWI76_RS08685	0.58	-0.9
1,830,766	-		BWI76_RS08685	0.58	-0.4
1,830,767	+		BWI76_RS08685	0.58	+0.3
1,830,768	+		BWI76_RS08685	0.59	-2.1
1,830,768	+		BWI76_RS08685	0.59	+1.1
1,830,768	+		BWI76_RS08685	0.59	-0.1
1,830,768	+		BWI76_RS08685	0.59	-0.0
1,830,768	+		BWI76_RS08685	0.59	-1.0
1,830,768	+		BWI76_RS08685	0.59	-0.7
1,830,768	+		BWI76_RS08685	0.59	-0.7
1,830,768	+		BWI76_RS08685	0.59	-0.2
1,830,768	+		BWI76_RS08685	0.59	-1.4
1,830,768	+		BWI76_RS08685	0.59	+0.2
1,830,768	+		BWI76_RS08685	0.59	-1.0
1,830,768	+		BWI76_RS08685	0.59	+0.2
1,830,768	+		BWI76_RS08685	0.59	-0.7
1,830,768	+		BWI76_RS08685	0.59	-1.9
1,830,768	+		BWI76_RS08685	0.59	-0.1
1,830,768	+		BWI76_RS08685	0.59	-0.1
1,830,768	+		BWI76_RS08685	0.59	-0.8
1,830,768	+		BWI76_RS08685	0.59	+0.9
1,830,768	+		BWI76_RS08685	0.59	-0.0
1,830,768	+		BWI76_RS08685	0.59	-0.3
1,830,768	+		BWI76_RS08685	0.59	-0.1
1,830,768	+		BWI76_RS08685	0.59	+0.6
1,830,768	+		BWI76_RS08685	0.59	-1.0
1,830,768	+		BWI76_RS08685	0.59	-0.3
1,830,768	+		BWI76_RS08685	0.59	+1.6
1,830,768	+		BWI76_RS08685	0.59	-1.4
1,830,768	+		BWI76_RS08685	0.59	+3.2
1,830,768	+		BWI76_RS08685	0.59	+0.4
1,830,768	+		BWI76_RS08685	0.59	+0.6
1,830,768	+		BWI76_RS08685	0.59	-1.6
1,830,768	+		BWI76_RS08685	0.59	+0.5
1,830,772	+		BWI76_RS08685	0.60	+0.6
1,830,775	-		BWI76_RS08685	0.61	-2.1
1,830,775	-		BWI76_RS08685	0.61	-0.7
1,830,776	-		BWI76_RS08685	0.61	-1.0
1,830,776	-		BWI76_RS08685	0.61	-0.3
1,830,776	-		BWI76_RS08685	0.61	-0.4
1,830,776	-		BWI76_RS08685	0.61	-1.7
1,830,776	-		BWI76_RS08685	0.61	-0.1
1,830,776	-		BWI76_RS08685	0.61	-0.8
1,830,776	-		BWI76_RS08685	0.61	-2.9
1,830,776	-		BWI76_RS08685	0.61	+0.6
1,830,776	-		BWI76_RS08685	0.61	-0.2
1,830,776	-		BWI76_RS08685	0.61	-1.2
1,830,776	-		BWI76_RS08685	0.61	-0.9
1,830,776	-		BWI76_RS08685	0.61	+0.3
1,830,776	-		BWI76_RS08685	0.61	+0.1
1,830,776	-		BWI76_RS08685	0.61	+0.6
1,830,776	-		BWI76_RS08685	0.61	-0.2
1,830,776	-		BWI76_RS08685	0.61	-1.2
1,830,776	-		BWI76_RS08685	0.61	+0.3
1,830,776	-		BWI76_RS08685	0.61	-0.2
1,830,776	-		BWI76_RS08685	0.61	-3.0
1,830,776	-		BWI76_RS08685	0.61	-0.3
1,830,776	-		BWI76_RS08685	0.61	-0.8
1,830,776	-		BWI76_RS08685	0.61	-0.4
1,830,776	-		BWI76_RS08685	0.61	+0.6
1,830,776	-		BWI76_RS08685	0.61	-0.3
1,830,776	-		BWI76_RS08685	0.61	+1.3
1,830,776	-		BWI76_RS08685	0.61	-0.1
1,830,776	-		BWI76_RS08685	0.61	+0.4
1,830,776	-		BWI76_RS08685	0.61	+0.4
1,830,776	-		BWI76_RS08685	0.61	-0.8
1,830,776	-		BWI76_RS08685	0.61	+0.2
1,830,776	-		BWI76_RS08685	0.61	-0.1
1,830,776	-		BWI76_RS08685	0.61	+0.5
1,830,776	-		BWI76_RS08685	0.61	+0.7
1,830,776	-		BWI76_RS08685	0.61	+0.0
1,830,776	-		BWI76_RS08685	0.61	-2.0
1,830,776	-		BWI76_RS08685	0.61	-2.7
1,830,780	-		BWI76_RS08685	0.62	-1.6
1,830,782	+		BWI76_RS08685	0.63	-1.4
1,830,798	+		BWI76_RS08685	0.68	-1.4
1,830,806	-		BWI76_RS08685	0.70	-0.1
1,830,806	-		BWI76_RS08685	0.70	-0.3
1,830,823	+		BWI76_RS08685	0.76	-0.7
1,830,824	+		BWI76_RS08685	0.76	-0.4
1,830,824	+		BWI76_RS08685	0.76	-0.2
1,830,832	-		BWI76_RS08685	0.78	-0.4
1,830,832	-		BWI76_RS08685	0.78	+0.4
1,830,832	-		BWI76_RS08685	0.78	-0.5
1,830,832	-		BWI76_RS08685	0.78	-1.6
1,830,845	+		BWI76_RS08685	0.82	+0.6
1,830,878	+				-2.6
1,830,878	+				+0.6
1,830,886	-				+0.6
1,830,886	-				+0.6
1,830,886	-				+0.6
1,830,894	-				-1.0
1,830,935	+				-2.0
1,830,960	-				+0.3
1,830,996	-				+0.1
1,831,042	+				+0.1
1,831,060	-		BWI76_RS08690	0.16	+2.2
1,831,060	-		BWI76_RS08690	0.16	-0.2
1,831,060	-		BWI76_RS08690	0.16	+0.1
1,831,088	-		BWI76_RS08690	0.28	-1.7
1,831,090	+		BWI76_RS08690	0.28	-0.8
1,831,090	+				+0.6
1,831,098	-		BWI76_RS08690	0.32	+0.4
1,831,098	-		BWI76_RS08690	0.32	+0.1
1,831,109	-		BWI76_RS08690	0.36	+0.7
1,831,117	-		BWI76_RS08690	0.39	-0.4
1,831,117	-		BWI76_RS08690	0.39	-0.4
1,831,172	+		BWI76_RS08690	0.62	-1.7
1,831,172	+		BWI76_RS08690	0.62	-1.0
1,831,180	-				-1.0
1,831,180	-		BWI76_RS08690	0.65	+0.0
1,831,220	+		BWI76_RS08690	0.81	+0.0
1,831,220	+		BWI76_RS08690	0.81	-0.9
1,831,226	-		BWI76_RS08690	0.84	+0.2
1,831,228	+		BWI76_RS08690	0.85	-0.5
1,831,228	+		BWI76_RS08690	0.85	-0.4
1,831,228	-		BWI76_RS08690	0.85	-1.1
1,831,230	-		BWI76_RS08690	0.85	+0.8
1,831,244	+				+0.6
1,831,262	+				-1.6
1,831,265	+				+0.3
1,831,273	+				+0.1
1,831,274	-				-2.0
1,831,309	+				+0.4
1,831,430	-				+0.6
1,831,453	-				-0.6
1,831,455	+				+0.9
1,831,455	+				+0.1
1,831,455	+				+0.0
1,831,455	+				-2.0
1,831,456	+				-0.0
1,831,456	+				+1.2
1,831,463	+				+0.6
1,831,464	+				-2.0
1,831,464	+				-0.4
1,831,464	+				-1.0
1,831,464	-				-0.4
1,831,464	-				+1.2
1,831,464	-				-0.4
1,831,464	-				+0.6
1,831,471	-				-1.0
1,831,472	-				-1.4
1,831,475	+				-1.4