Experiment: RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21205 and BWI76_RS21210 are separated by 112 nucleotides BWI76_RS21210 and BWI76_RS21215 are separated by 112 nucleotides
BWI76_RS21205: BWI76_RS21205 - MFS transporter, at 4,438,937 to 4,440,373
_RS21205
BWI76_RS21210: BWI76_RS21210 - hypothetical protein, at 4,440,486 to 4,443,761
_RS21210
BWI76_RS21215: BWI76_RS21215 - NAGC-like transcriptional regulator, at 4,443,874 to 4,445,070
_RS21215
Position (kb) 4440
4441
4442
4443
4444 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4439.577 kb on + strand, within BWI76_RS21205 at 4439.708 kb on - strand, within BWI76_RS21205 at 4439.923 kb on + strand, within BWI76_RS21205 at 4440.096 kb on + strand, within BWI76_RS21205 at 4440.208 kb on - strand, within BWI76_RS21205 at 4440.212 kb on + strand, within BWI76_RS21205 at 4440.330 kb on + strand at 4440.429 kb on - strand at 4440.441 kb on + strand at 4440.484 kb on - strand at 4440.913 kb on + strand, within BWI76_RS21210 at 4440.921 kb on - strand, within BWI76_RS21210 at 4440.975 kb on - strand, within BWI76_RS21210 at 4441.095 kb on - strand, within BWI76_RS21210 at 4441.128 kb on - strand, within BWI76_RS21210 at 4441.217 kb on - strand, within BWI76_RS21210 at 4441.247 kb on + strand, within BWI76_RS21210 at 4441.475 kb on + strand, within BWI76_RS21210 at 4441.509 kb on + strand, within BWI76_RS21210 at 4441.845 kb on + strand, within BWI76_RS21210 at 4441.871 kb on + strand, within BWI76_RS21210 at 4441.937 kb on - strand, within BWI76_RS21210 at 4441.990 kb on + strand, within BWI76_RS21210 at 4442.250 kb on + strand, within BWI76_RS21210 at 4442.506 kb on - strand, within BWI76_RS21210 at 4442.555 kb on - strand, within BWI76_RS21210 at 4442.768 kb on + strand, within BWI76_RS21210 at 4442.889 kb on + strand, within BWI76_RS21210 at 4442.934 kb on - strand, within BWI76_RS21210 at 4443.262 kb on + strand, within BWI76_RS21210 at 4443.634 kb on + strand at 4444.154 kb on - strand, within BWI76_RS21215 at 4444.247 kb on + strand, within BWI76_RS21215 at 4444.255 kb on - strand, within BWI76_RS21215 at 4444.411 kb on - strand, within BWI76_RS21215 at 4444.755 kb on + strand, within BWI76_RS21215
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 4,439,577 + BWI76_RS21205 0.45 +0.4 4,439,708 - BWI76_RS21205 0.54 +0.2 4,439,923 + BWI76_RS21205 0.69 -0.9 4,440,096 + BWI76_RS21205 0.81 -0.8 4,440,208 - BWI76_RS21205 0.88 +0.2 4,440,212 + BWI76_RS21205 0.89 -0.1 4,440,330 + +0.4 4,440,429 - +0.2 4,440,441 + +0.8 4,440,484 - +0.2 4,440,913 + BWI76_RS21210 0.13 +0.0 4,440,921 - BWI76_RS21210 0.13 +0.8 4,440,975 - BWI76_RS21210 0.15 +1.9 4,441,095 - BWI76_RS21210 0.19 +0.4 4,441,128 - BWI76_RS21210 0.20 +0.3 4,441,217 - BWI76_RS21210 0.22 +0.6 4,441,247 + BWI76_RS21210 0.23 +1.7 4,441,475 + BWI76_RS21210 0.30 -0.2 4,441,509 + BWI76_RS21210 0.31 +1.0 4,441,845 + BWI76_RS21210 0.41 +1.1 4,441,871 + BWI76_RS21210 0.42 +0.5 4,441,937 - BWI76_RS21210 0.44 +0.5 4,441,990 + BWI76_RS21210 0.46 -0.5 4,442,250 + BWI76_RS21210 0.54 -2.3 4,442,506 - BWI76_RS21210 0.62 +1.8 4,442,555 - BWI76_RS21210 0.63 +0.9 4,442,768 + BWI76_RS21210 0.70 +1.9 4,442,889 + BWI76_RS21210 0.73 +0.2 4,442,934 - BWI76_RS21210 0.75 +0.9 4,443,262 + BWI76_RS21210 0.85 +0.6 4,443,634 + +0.2 4,444,154 - BWI76_RS21215 0.23 +1.4 4,444,247 + BWI76_RS21215 0.31 -0.6 4,444,255 - BWI76_RS21215 0.32 -2.3 4,444,411 - BWI76_RS21215 0.45 -3.3 4,444,755 + BWI76_RS21215 0.74 +0.4
Or see this region's nucleotide sequence