Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15560

Experiment: RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
3,259,174	-		BWI76_RS15550	0.84	-1.0
3,259,255	+		BWI76_RS15550	0.87	-2.4
3,259,333	+		BWI76_RS15550	0.89	+0.2
3,259,362	+				-0.8
3,259,362	+				-1.6
3,259,370	-				-0.3
3,259,370	-				-2.1
3,259,370	-				-0.2
3,259,390	+				-1.6
3,259,399	-				-2.9
3,259,414	-				-1.4
3,259,418	+				-2.8
3,259,425	+				-1.5
3,259,426	-				-1.9
3,259,449	+				-0.3
3,259,449	+				-2.3
3,259,457	-				-0.9
3,259,457	-				-0.7
3,259,457	-				-0.8
3,259,480	+				-0.7
3,259,535	+				-0.6
3,259,535	+				-0.7
3,259,535	+				+0.1
3,259,543	-				-1.5
3,259,606	+				-1.0
3,259,607	+				+0.8
3,259,608	+				-1.0
3,259,608	+				-0.4
3,259,689	+				-0.6
3,259,708	-				-0.0
3,259,749	+				+0.1
3,259,757	-		BWI76_RS15555	0.11	-0.5
3,259,757	-		BWI76_RS15555	0.11	-0.2
3,259,757	-		BWI76_RS15555	0.11	+0.1
3,259,757	-		BWI76_RS15555	0.11	-1.9
3,259,757	-		BWI76_RS15555	0.11	-1.0
3,259,765	-		BWI76_RS15555	0.13	-0.4
3,259,776	-		BWI76_RS15555	0.15	-0.5
3,259,776	-		BWI76_RS15555	0.15	+0.1
3,259,790	-		BWI76_RS15555	0.18	+0.1
3,259,848	-		BWI76_RS15555	0.31	-0.3
3,259,889	-		BWI76_RS15555	0.39	-0.1
3,259,891	+		BWI76_RS15555	0.40	-1.1
3,259,901	-		BWI76_RS15555	0.42	+0.2
3,259,935	-		BWI76_RS15555	0.49	-0.8
3,259,985	-		BWI76_RS15555	0.60	-2.3
3,260,007	-		BWI76_RS15555	0.64	-1.1
3,260,007	-		BWI76_RS15555	0.64	-0.4
3,260,024	-		BWI76_RS15555	0.68	-2.6
3,260,024	-		BWI76_RS15555	0.68	-0.7
3,260,043	-		BWI76_RS15555	0.72	-1.2
3,260,069	+		BWI76_RS15555	0.77	-0.3
3,260,077	-		BWI76_RS15555	0.79	-0.7
3,260,077	-		BWI76_RS15555	0.79	-1.1
3,260,184	-				-0.5
3,260,184	-				-0.4
3,260,241	-		BWI76_RS15560	0.21	-0.6
3,260,248	+		BWI76_RS15560	0.23	-2.5
3,260,256	-		BWI76_RS15560	0.26	-0.8
3,260,256	-		BWI76_RS15560	0.26	-1.9
3,260,267	-		BWI76_RS15560	0.29	-1.2
3,260,269	+		BWI76_RS15560	0.29	-1.0
3,260,311	-		BWI76_RS15560	0.42	-1.2
3,260,339	+		BWI76_RS15560	0.50	-0.0
3,260,339	+		BWI76_RS15560	0.50	-0.5
3,260,339	+		BWI76_RS15560	0.50	-3.0
3,260,339	+		BWI76_RS15560	0.50	-0.0
3,260,339	+		BWI76_RS15560	0.50	-0.7
3,260,339	+		BWI76_RS15560	0.50	+0.2
3,260,347	-		BWI76_RS15560	0.53	-3.0
3,260,347	-		BWI76_RS15560	0.53	-0.9
3,260,347	-		BWI76_RS15560	0.53	-1.4
3,260,347	-		BWI76_RS15560	0.53	-1.2
3,260,347	-		BWI76_RS15560	0.53	-0.2
3,260,347	-		BWI76_RS15560	0.53	+0.1
3,260,348	-		BWI76_RS15560	0.53	-2.0
3,260,496	-				-0.6
3,260,552	-				+0.1
3,260,583	-				-1.8
3,260,621	-		BWI76_RS15565	0.20	-1.2
3,260,741	-		BWI76_RS15565	0.77	-1.7
3,260,741	-		BWI76_RS15565	0.77	-0.9
3,260,842	-				-0.3
3,260,854	+				-1.8
3,260,867	+				-1.8
3,260,875	-				-0.3
3,260,929	-				-1.1
3,261,039	-		BWI76_RS15570	0.22	-0.8
3,261,283	-		BWI76_RS15570	0.53	-0.2