Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12325

Experiment: RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
2,570,305	-		BWI76_RS12315	0.70	+0.9
2,570,404	+		BWI76_RS12315	0.89	-1.7
2,570,421	+				-1.4
2,570,423	+				-2.1
2,570,423	+				+0.9
2,570,497	+				-0.1
2,570,507	+				-1.0
2,570,534	-		BWI76_RS12320	0.16	-1.1
2,570,587	+		BWI76_RS12320	0.30	-0.3
2,570,592	+		BWI76_RS12320	0.32	-2.1
2,570,605	-		BWI76_RS12320	0.35	-2.0
2,570,611	+		BWI76_RS12320	0.37	+0.4
2,570,624	+		BWI76_RS12320	0.40	-1.0
2,570,624	+		BWI76_RS12320	0.40	-0.4
2,570,634	+		BWI76_RS12320	0.43	-1.3
2,570,647	+		BWI76_RS12320	0.46	-4.4
2,570,676	+		BWI76_RS12320	0.54	-1.7
2,570,676	+		BWI76_RS12320	0.54	-1.1
2,570,680	+				+1.9
2,570,697	+		BWI76_RS12320	0.60	-0.9
2,570,700	+		BWI76_RS12320	0.61	+1.3
2,570,701	+		BWI76_RS12320	0.61	-2.9
2,570,707	+		BWI76_RS12320	0.62	-1.0
2,570,707	+		BWI76_RS12320	0.62	-1.9
2,570,707	+		BWI76_RS12320	0.62	-2.7
2,570,707	+		BWI76_RS12320	0.62	+0.3
2,570,745	+		BWI76_RS12320	0.73	-3.5
2,570,848	+				-1.6
2,570,971	+				-1.4
2,570,979	-				-0.7
2,570,979	-				-0.2
2,571,009	+				-0.7
2,571,051	-				-0.8
2,571,059	-				-0.7
2,571,103	+				-0.1
2,571,106	-				-1.5
2,571,157	-				-2.0
2,571,208	+				-1.4
2,571,302	+		BWI76_RS12325	0.11	-0.3
2,571,310	-		BWI76_RS12325	0.11	-2.0
2,571,368	+				+0.9
2,571,393	+		BWI76_RS12325	0.14	-1.1
2,571,486	+		BWI76_RS12325	0.17	-0.3
2,571,486	+		BWI76_RS12325	0.17	-0.0
2,571,494	-		BWI76_RS12325	0.17	-1.7
2,571,542	+				+0.3
2,571,550	-		BWI76_RS12325	0.19	-2.7
2,571,550	-		BWI76_RS12325	0.19	-1.5
2,571,550	-		BWI76_RS12325	0.19	-0.1
2,571,558	+		BWI76_RS12325	0.19	-0.3
2,571,560	-		BWI76_RS12325	0.19	-1.8
2,571,692	+		BWI76_RS12325	0.23	-0.4
2,571,699	+		BWI76_RS12325	0.23	-0.6
2,571,699	+		BWI76_RS12325	0.23	-0.6
2,571,699	+		BWI76_RS12325	0.23	-2.0
2,571,740	-		BWI76_RS12325	0.24	-0.7
2,571,773	+		BWI76_RS12325	0.25	-1.6
2,571,805	-		BWI76_RS12325	0.26	-1.1
2,571,814	+		BWI76_RS12325	0.27	-1.5
2,571,814	+		BWI76_RS12325	0.27	-1.0
2,571,814	+		BWI76_RS12325	0.27	-1.7
2,571,827	-		BWI76_RS12325	0.27	-2.1
2,571,922	-		BWI76_RS12325	0.30	-0.7
2,571,993	+		BWI76_RS12325	0.32	-2.9
2,572,056	+		BWI76_RS12325	0.34	-2.7
2,572,204	+		BWI76_RS12325	0.38	-1.2
2,572,290	+		BWI76_RS12325	0.41	-0.9
2,572,404	+		BWI76_RS12325	0.44	-1.4
2,572,433	+		BWI76_RS12325	0.45	-0.7
2,572,676	-		BWI76_RS12325	0.53	-1.7
2,572,773	+		BWI76_RS12325	0.56	-1.1
2,572,793	+		BWI76_RS12325	0.56	+0.9
2,572,829	-		BWI76_RS12325	0.57	-1.2
2,572,863	+		BWI76_RS12325	0.58	-2.7
2,572,863	+		BWI76_RS12325	0.58	-1.4
2,573,209	-		BWI76_RS12325	0.69	-1.3
2,573,216	+		BWI76_RS12325	0.69	-0.8
2,573,221	-		BWI76_RS12325	0.69	-0.8
2,573,278	+				-1.7
2,573,306	+		BWI76_RS12325	0.72	-1.4
2,573,333	-		BWI76_RS12325	0.73	-3.9
2,573,367	+		BWI76_RS12325	0.74	-0.0
2,573,374	-		BWI76_RS12325	0.74	+0.1
2,573,379	-		BWI76_RS12325	0.74	-1.3
2,573,384	+		BWI76_RS12325	0.74	-0.1
2,573,394	+		BWI76_RS12325	0.75	+0.1
2,573,461	-		BWI76_RS12325	0.77	-3.3
2,573,496	-		BWI76_RS12325	0.78	-1.6
2,573,522	+		BWI76_RS12325	0.78	-0.6
2,573,536	-		BWI76_RS12325	0.79	-1.1
2,573,630	+		BWI76_RS12325	0.82	+0.9
2,573,654	-				-0.5
2,573,900	-				-0.9
2,574,018	-				-1.5
2,574,080	+				+0.3
2,574,081	-				-0.3
2,574,088	-				-1.6
2,574,088	-				-0.7
2,574,131	-				-1.4
2,574,145	-				-1.2
2,574,160	+				-2.2
2,574,247	-				-1.1
2,574,366	-		BWI76_RS12330	0.29	-0.4
2,574,386	-		BWI76_RS12330	0.33	-0.4
2,574,459	+		BWI76_RS12330	0.49	-0.3
2,574,668	+				-1.0
2,574,668	+				-0.4
2,574,675	-				-1.1
2,574,722	+				-0.7
2,574,827	+		BWI76_RS12335	0.29	-0.0
2,574,835	-		BWI76_RS12335	0.30	-0.4
2,574,843	-		BWI76_RS12335	0.32	-0.8
2,574,862	-		BWI76_RS12335	0.36	+0.6
2,575,011	-				+0.4
2,575,034	-		BWI76_RS12335	0.72	-3.9
2,575,034	-		BWI76_RS12335	0.72	-1.1
2,575,075	-		BWI76_RS12335	0.80	-1.1
2,575,087	+		BWI76_RS12335	0.83	-1.9
2,575,087	+		BWI76_RS12335	0.83	-3.0
2,575,091	+		BWI76_RS12335	0.83	-0.1
2,575,091	+		BWI76_RS12335	0.83	-0.5
2,575,095	-		BWI76_RS12335	0.84	-0.7
2,575,095	-		BWI76_RS12335	0.84	-1.7
2,575,099	-		BWI76_RS12335	0.85	-1.2
2,575,099	-		BWI76_RS12335	0.85	-3.2
2,575,099	-		BWI76_RS12335	0.85	-1.9
2,575,099	-		BWI76_RS12335	0.85	-0.9
2,575,115	+		BWI76_RS12335	0.88	-1.0
2,575,119	-		BWI76_RS12335	0.89	-0.7
2,575,125	-				-1.7
2,575,179	+				-3.2
2,575,186	-				-1.5