Experiment: RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09860 and BWI76_RS09865 are separated by 13 nucleotides BWI76_RS09865 and BWI76_RS09870 are separated by 60 nucleotides BWI76_RS09870 and BWI76_RS09875 are separated by 187 nucleotides
BWI76_RS09860: BWI76_RS09860 - hypothetical protein, at 2,071,543 to 2,072,094
_RS09860
BWI76_RS09865: BWI76_RS09865 - MBL fold hydrolase, at 2,072,108 to 2,072,755
_RS09865
BWI76_RS09870: BWI76_RS09870 - aromatic amino acid aminotransferase, at 2,072,816 to 2,074,006
_RS09870
BWI76_RS09875: BWI76_RS09875 - phosphoporin PhoE, at 2,074,194 to 2,075,273
_RS09875
Position (kb)
2072
2073
2074
2075 Strain fitness (log2 ratio)
-2
-1
0
1 at 2071.818 kb on + strand, within BWI76_RS09860 at 2071.818 kb on + strand, within BWI76_RS09860 at 2071.826 kb on - strand, within BWI76_RS09860 at 2071.826 kb on - strand, within BWI76_RS09860 at 2072.025 kb on - strand, within BWI76_RS09860 at 2072.244 kb on + strand, within BWI76_RS09865 at 2072.262 kb on - strand, within BWI76_RS09865 at 2072.312 kb on + strand, within BWI76_RS09865 at 2072.317 kb on + strand, within BWI76_RS09865 at 2072.317 kb on + strand, within BWI76_RS09865 at 2072.317 kb on + strand, within BWI76_RS09865 at 2072.325 kb on - strand, within BWI76_RS09865 at 2073.464 kb on - strand, within BWI76_RS09870 at 2073.577 kb on + strand, within BWI76_RS09870 at 2073.605 kb on + strand, within BWI76_RS09870 at 2073.769 kb on + strand, within BWI76_RS09870 at 2073.866 kb on + strand, within BWI76_RS09870 at 2073.874 kb on - strand, within BWI76_RS09870 at 2073.874 kb on - strand, within BWI76_RS09870 at 2073.874 kb on - strand, within BWI76_RS09870 at 2073.879 kb on + strand, within BWI76_RS09870 at 2073.995 kb on - strand at 2074.455 kb on - strand, within BWI76_RS09875 at 2074.528 kb on + strand, within BWI76_RS09875 at 2074.544 kb on - strand, within BWI76_RS09875 at 2074.557 kb on - strand, within BWI76_RS09875 at 2074.557 kb on - strand, within BWI76_RS09875 at 2074.672 kb on - strand, within BWI76_RS09875 at 2074.845 kb on - strand, within BWI76_RS09875 at 2074.857 kb on + strand, within BWI76_RS09875 at 2074.865 kb on - strand, within BWI76_RS09875
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 2,071,818 + BWI76_RS09860 0.50 +0.6 2,071,818 + BWI76_RS09860 0.50 -0.8 2,071,826 - BWI76_RS09860 0.51 -0.9 2,071,826 - BWI76_RS09860 0.51 +1.0 2,072,025 - BWI76_RS09860 0.87 +0.3 2,072,244 + BWI76_RS09865 0.21 +0.1 2,072,262 - BWI76_RS09865 0.24 -1.3 2,072,312 + BWI76_RS09865 0.31 -0.2 2,072,317 + BWI76_RS09865 0.32 +0.3 2,072,317 + BWI76_RS09865 0.32 +0.6 2,072,317 + BWI76_RS09865 0.32 +1.2 2,072,325 - BWI76_RS09865 0.33 +0.7 2,073,464 - BWI76_RS09870 0.54 -0.5 2,073,577 + BWI76_RS09870 0.64 -1.8 2,073,605 + BWI76_RS09870 0.66 -2.2 2,073,769 + BWI76_RS09870 0.80 -1.0 2,073,866 + BWI76_RS09870 0.88 -2.0 2,073,874 - BWI76_RS09870 0.89 -2.2 2,073,874 - BWI76_RS09870 0.89 -2.0 2,073,874 - BWI76_RS09870 0.89 -1.1 2,073,879 + BWI76_RS09870 0.89 -0.8 2,073,995 - -0.9 2,074,455 - BWI76_RS09875 0.24 +0.3 2,074,528 + BWI76_RS09875 0.31 -0.3 2,074,544 - BWI76_RS09875 0.32 +0.1 2,074,557 - BWI76_RS09875 0.34 -0.2 2,074,557 - BWI76_RS09875 0.34 -0.2 2,074,672 - BWI76_RS09875 0.44 -0.9 2,074,845 - BWI76_RS09875 0.60 -1.9 2,074,857 + BWI76_RS09875 0.61 +0.3 2,074,865 - BWI76_RS09875 0.62 -0.1
Or see this region's nucleotide sequence