Experiment: RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00595 and BWI76_RS00600 are separated by 106 nucleotides BWI76_RS00600 and BWI76_RS00605 are separated by 114 nucleotides
BWI76_RS00595: BWI76_RS00595 - MFS transporter, at 118,344 to 119,621
_RS00595
BWI76_RS00600: BWI76_RS00600 - LacI family transcriptional regulator, at 119,728 to 120,723
_RS00600
BWI76_RS00605: BWI76_RS00605 - alpha-galactosidase, at 120,838 to 122,961
_RS00605
Position (kb)
119
120
121 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 118.757 kb on - strand, within BWI76_RS00595 at 118.914 kb on + strand, within BWI76_RS00595 at 118.951 kb on + strand, within BWI76_RS00595 at 118.970 kb on - strand, within BWI76_RS00595 at 118.999 kb on - strand, within BWI76_RS00595 at 119.012 kb on + strand, within BWI76_RS00595 at 119.120 kb on + strand, within BWI76_RS00595 at 119.151 kb on - strand, within BWI76_RS00595 at 119.242 kb on - strand, within BWI76_RS00595 at 119.259 kb on - strand, within BWI76_RS00595 at 119.274 kb on + strand, within BWI76_RS00595 at 119.435 kb on + strand, within BWI76_RS00595 at 119.482 kb on - strand, within BWI76_RS00595 at 119.850 kb on - strand, within BWI76_RS00600 at 119.890 kb on - strand, within BWI76_RS00600 at 120.058 kb on - strand, within BWI76_RS00600 at 120.072 kb on - strand, within BWI76_RS00600 at 120.072 kb on - strand, within BWI76_RS00600 at 120.118 kb on - strand, within BWI76_RS00600 at 120.418 kb on - strand, within BWI76_RS00600 at 120.613 kb on + strand, within BWI76_RS00600 at 121.130 kb on + strand, within BWI76_RS00605 at 121.201 kb on + strand, within BWI76_RS00605 at 121.222 kb on + strand, within BWI76_RS00605 at 121.230 kb on - strand, within BWI76_RS00605 at 121.284 kb on + strand, within BWI76_RS00605 at 121.458 kb on + strand, within BWI76_RS00605 at 121.644 kb on - strand, within BWI76_RS00605 at 121.654 kb on - strand, within BWI76_RS00605 at 121.720 kb on + strand, within BWI76_RS00605
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 118,757 - BWI76_RS00595 0.32 -1.3 118,914 + BWI76_RS00595 0.45 +0.6 118,951 + BWI76_RS00595 0.47 +0.4 118,970 - BWI76_RS00595 0.49 -0.5 118,999 - BWI76_RS00595 0.51 +0.3 119,012 + BWI76_RS00595 0.52 +0.7 119,120 + BWI76_RS00595 0.61 +0.8 119,151 - BWI76_RS00595 0.63 +1.0 119,242 - BWI76_RS00595 0.70 +0.9 119,259 - BWI76_RS00595 0.72 +1.0 119,274 + BWI76_RS00595 0.73 -2.5 119,435 + BWI76_RS00595 0.85 -0.1 119,482 - BWI76_RS00595 0.89 +0.3 119,850 - BWI76_RS00600 0.12 +1.0 119,890 - BWI76_RS00600 0.16 -1.3 120,058 - BWI76_RS00600 0.33 -0.6 120,072 - BWI76_RS00600 0.35 -0.6 120,072 - BWI76_RS00600 0.35 -3.5 120,118 - BWI76_RS00600 0.39 -0.7 120,418 - BWI76_RS00600 0.69 -0.9 120,613 + BWI76_RS00600 0.89 -1.0 121,130 + BWI76_RS00605 0.14 +0.1 121,201 + BWI76_RS00605 0.17 -0.9 121,222 + BWI76_RS00605 0.18 +0.1 121,230 - BWI76_RS00605 0.18 +1.0 121,284 + BWI76_RS00605 0.21 +1.0 121,458 + BWI76_RS00605 0.29 +0.3 121,644 - BWI76_RS00605 0.38 -0.1 121,654 - BWI76_RS00605 0.38 +0.6 121,720 + BWI76_RS00605 0.42 +0.6
Or see this region's nucleotide sequence