Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05435

Experiment: RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
1,140,133	+				-0.3
1,140,211	-				-0.2
1,140,243	+				+0.3
1,140,251	-				-0.0
1,140,256	-				+0.6
1,140,481	+		BWI76_RS05430	0.38	+0.8
1,140,540	+		BWI76_RS05430	0.46	+1.0
1,140,752	-		BWI76_RS05430	0.73	+0.2
1,141,076	-				-0.7
1,141,147	-				+0.1
1,141,154	+		BWI76_RS05435	0.10	+0.4
1,141,358	+		BWI76_RS05435	0.25	-3.1
1,141,378	-		BWI76_RS05435	0.26	+0.7
1,141,415	+		BWI76_RS05435	0.29	+1.0
1,141,503	-		BWI76_RS05435	0.36	-0.0
1,141,592	+		BWI76_RS05435	0.42	+0.1
1,141,632	-		BWI76_RS05435	0.45	+1.0
1,141,795	-		BWI76_RS05435	0.57	+1.0
1,141,987	+		BWI76_RS05435	0.71	+0.9
1,141,995	-		BWI76_RS05435	0.72	+0.5
1,142,204	-		BWI76_RS05435	0.87	+0.6
1,142,208	-		BWI76_RS05435	0.87	+0.9
1,142,230	+		BWI76_RS05435	0.89	+0.4
1,142,230	+		BWI76_RS05435	0.89	+0.3
1,142,278	-				+0.4
1,142,305	+				+1.0
1,142,384	-				-1.1
1,142,384	-				-0.3
1,142,453	-				+0.1
1,142,469	+				-1.7
1,142,491	+				-1.7
1,142,491	+				-1.0
1,142,499	-				-1.1
1,142,499	-				-0.0
1,142,637	-		BWI76_RS05440	0.24	-3.5
1,142,692	+		BWI76_RS05440	0.31	-1.7
1,142,715	+		BWI76_RS05440	0.34	+0.8
1,142,718	-		BWI76_RS05440	0.35	-0.1
1,142,736	-		BWI76_RS05440	0.37	-0.2
1,142,750	+		BWI76_RS05440	0.39	-2.4
1,142,800	-		BWI76_RS05440	0.46	-3.1
1,142,800	-		BWI76_RS05440	0.46	-0.2
1,142,800	-		BWI76_RS05440	0.46	+1.3
1,142,841	+		BWI76_RS05440	0.51	-1.1
1,142,879	-		BWI76_RS05440	0.56	-2.3
1,142,879	-		BWI76_RS05440	0.56	-1.2
1,143,029	+		BWI76_RS05440	0.76	-0.8
1,143,076	-		BWI76_RS05440	0.82	+0.6
1,143,264	-				-3.5
1,143,294	+				+0.6
1,143,352	-		BWI76_RS05445	0.15	-0.2
1,143,352	-		BWI76_RS05445	0.15	-1.0