Experiment: RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00750 and BWI76_RS00755 are separated by 9 nucleotides BWI76_RS00755 and BWI76_RS00760 are separated by 91 nucleotides
BWI76_RS00750: BWI76_RS00750 - ATP-dependent protease ATP-binding subunit HslU, at 152,271 to 153,605
_RS00750
BWI76_RS00755: BWI76_RS00755 - ATP-dependent protease subunit HslV, at 153,615 to 154,145
_RS00755
BWI76_RS00760: BWI76_RS00760 - cell division protein FtsN, at 154,237 to 155,211
_RS00760
Position (kb) 153
154
155 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 152.745 kb on - strand, within BWI76_RS00750 at 152.784 kb on - strand, within BWI76_RS00750 at 152.931 kb on - strand, within BWI76_RS00750 at 153.078 kb on - strand, within BWI76_RS00750 at 153.484 kb on - strand at 153.489 kb on - strand at 153.823 kb on + strand, within BWI76_RS00755 at 153.967 kb on + strand, within BWI76_RS00755 at 154.069 kb on + strand, within BWI76_RS00755 at 154.077 kb on - strand, within BWI76_RS00755 at 154.082 kb on - strand, within BWI76_RS00755 at 154.114 kb on - strand at 154.369 kb on - strand, within BWI76_RS00760 at 154.417 kb on - strand, within BWI76_RS00760 at 154.532 kb on + strand, within BWI76_RS00760 at 154.540 kb on - strand, within BWI76_RS00760 at 154.540 kb on - strand, within BWI76_RS00760 at 154.540 kb on - strand, within BWI76_RS00760 at 154.565 kb on - strand, within BWI76_RS00760
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 152,745 - BWI76_RS00750 0.36 +1.0 152,784 - BWI76_RS00750 0.38 -0.7 152,931 - BWI76_RS00750 0.49 +2.1 153,078 - BWI76_RS00750 0.60 -0.5 153,484 - +0.5 153,489 - -2.1 153,823 + BWI76_RS00755 0.39 -3.1 153,967 + BWI76_RS00755 0.66 -3.0 154,069 + BWI76_RS00755 0.85 -3.9 154,077 - BWI76_RS00755 0.87 -0.6 154,082 - BWI76_RS00755 0.88 -2.5 154,114 - -0.7 154,369 - BWI76_RS00760 0.14 +2.4 154,417 - BWI76_RS00760 0.18 +0.6 154,532 + BWI76_RS00760 0.30 -2.1 154,540 - BWI76_RS00760 0.31 -1.2 154,540 - BWI76_RS00760 0.31 -0.1 154,540 - BWI76_RS00760 0.31 -0.1 154,565 - BWI76_RS00760 0.34 +1.1
Or see this region's nucleotide sequence