Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27765 and BWI76_RS27770 are separated by 212 nucleotides BWI76_RS27770 and BWI76_RS27775 overlap by 17 nucleotides BWI76_RS27775 and BWI76_RS27780 are separated by 84 nucleotides BWI76_RS27780 and BWI76_RS27785 are separated by 211 nucleotides
BWI76_RS27765: BWI76_RS27765 - MFS transporter, at 5,761,352 to 5,762,533
_RS27765
BWI76_RS27770: BWI76_RS27770 - hypothetical protein, at 5,762,746 to 5,763,105
_RS27770
BWI76_RS27775: BWI76_RS27775 - transcriptional regulator, at 5,763,089 to 5,763,412
_RS27775
BWI76_RS27780: BWI76_RS27780 - hypothetical protein, at 5,763,497 to 5,763,949
_RS27780
BWI76_RS27785: BWI76_RS27785 - hexose-6-phosphate transporter; deoxyribose-5-phosphate or dAMP transporter <small>(from data)</small>, at 5,764,161 to 5,765,552
_RS27785
Position (kb) 5763
5764 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5762.536 kb on - strand at 5762.536 kb on - strand at 5762.784 kb on - strand, within BWI76_RS27770 at 5762.856 kb on - strand, within BWI76_RS27770 at 5762.863 kb on - strand, within BWI76_RS27770 at 5762.932 kb on + strand, within BWI76_RS27770 at 5762.932 kb on - strand, within BWI76_RS27770 at 5762.959 kb on + strand, within BWI76_RS27770 at 5763.089 kb on - strand at 5763.131 kb on + strand, within BWI76_RS27775 at 5763.401 kb on - strand at 5763.417 kb on + strand at 5763.417 kb on + strand at 5763.453 kb on - strand at 5763.471 kb on + strand at 5763.550 kb on + strand, within BWI76_RS27780 at 5763.763 kb on + strand, within BWI76_RS27780 at 5763.942 kb on - strand at 5763.942 kb on - strand at 5764.074 kb on - strand at 5764.095 kb on - strand at 5764.095 kb on - strand at 5764.158 kb on + strand at 5764.177 kb on + strand at 5764.279 kb on - strand at 5764.387 kb on - strand, within BWI76_RS27785 at 5764.473 kb on - strand, within BWI76_RS27785 at 5764.571 kb on - strand, within BWI76_RS27785 at 5764.646 kb on + strand, within BWI76_RS27785 at 5764.710 kb on + strand, within BWI76_RS27785 at 5764.845 kb on - strand, within BWI76_RS27785
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 5,762,536 - -1.6 5,762,536 - -0.4 5,762,784 - BWI76_RS27770 0.11 +1.0 5,762,856 - BWI76_RS27770 0.31 +0.2 5,762,863 - BWI76_RS27770 0.33 +1.2 5,762,932 + BWI76_RS27770 0.52 -1.1 5,762,932 - BWI76_RS27770 0.52 -3.1 5,762,959 + BWI76_RS27770 0.59 +0.5 5,763,089 - +0.5 5,763,131 + BWI76_RS27775 0.13 +1.2 5,763,401 - -2.0 5,763,417 + -0.8 5,763,417 + +0.2 5,763,453 - -1.4 5,763,471 + +0.3 5,763,550 + BWI76_RS27780 0.12 -2.7 5,763,763 + BWI76_RS27780 0.59 -1.6 5,763,942 - +1.6 5,763,942 - +1.2 5,764,074 - +0.2 5,764,095 - +1.1 5,764,095 - +1.5 5,764,158 + +1.0 5,764,177 + -0.3 5,764,279 - -0.3 5,764,387 - BWI76_RS27785 0.16 -2.0 5,764,473 - BWI76_RS27785 0.22 -0.7 5,764,571 - BWI76_RS27785 0.29 +0.1 5,764,646 + BWI76_RS27785 0.35 -0.3 5,764,710 + BWI76_RS27785 0.39 +1.2 5,764,845 - BWI76_RS27785 0.49 +0.8
Or see this region's nucleotide sequence