Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS25400

Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
5,278,491	-		BWI76_RS25390	0.40	-0.0
5,278,581	+		BWI76_RS25390	0.76	-0.3
5,278,591	+		BWI76_RS25390	0.80	+0.1
5,278,596	+		BWI76_RS25390	0.82	-3.5
5,278,596	+		BWI76_RS25390	0.82	+0.2
5,278,596	+		BWI76_RS25390	0.82	-3.5
5,278,601	+		BWI76_RS25390	0.84	+0.8
5,278,601	+		BWI76_RS25390	0.84	-0.4
5,278,608	+		BWI76_RS25390	0.87	+0.2
5,278,608	+		BWI76_RS25390	0.87	-3.2
5,278,608	+		BWI76_RS25390	0.87	-0.6
5,278,615	+				-0.8
5,278,615	+		BWI76_RS25390	0.90	-0.2
5,278,615	+		BWI76_RS25390	0.90	-2.0
5,278,615	+		BWI76_RS25390	0.90	-1.4
5,278,615	+		BWI76_RS25390	0.90	+2.6
5,278,615	+		BWI76_RS25390	0.90	+0.6
5,278,615	+		BWI76_RS25390	0.90	-0.5
5,278,615	+		BWI76_RS25390	0.90	-0.4
5,278,615	+		BWI76_RS25390	0.90	+0.8
5,278,615	+		BWI76_RS25390	0.90	+0.3
5,278,615	+		BWI76_RS25390	0.90	-0.4
5,278,615	+		BWI76_RS25390	0.90	+1.2
5,278,615	+		BWI76_RS25390	0.90	-1.7
5,278,620	-				-0.8
5,278,622	-				-0.6
5,278,623	-				+2.4
5,278,623	-				+1.2
5,278,623	-				-1.2
5,278,623	-				+1.0
5,278,623	-				+0.3
5,278,623	-				+2.1
5,278,623	-				+2.0
5,278,623	-				+0.2
5,278,623	-				-1.3
5,278,623	-				+0.2
5,278,623	-				+1.2
5,278,623	-				-0.1
5,278,623	-				-0.4
5,278,625	+				+2.3
5,278,625	+				-0.2
5,278,625	+				-0.1
5,278,625	+				+2.6
5,278,625	+				-0.2
5,278,625	+				+0.1
5,278,625	-				+0.2
5,278,628	-				-1.4
5,278,633	-				+0.6
5,278,633	-				-3.0
5,278,633	-				-0.4
5,278,633	-				+0.6
5,278,633	-				-1.5
5,278,633	-				-3.0
5,278,636	+				-1.0
5,278,638	-				-0.2
5,278,698	+				-2.4
5,278,707	+				+0.4
5,278,707	+				+1.2
5,278,707	+				-1.2
5,278,707	+				-0.3
5,278,707	+				-0.2
5,278,707	+				-0.2
5,278,707	+				-0.4
5,278,712	+				-1.2
5,278,715	+				-3.4
5,278,715	-				-0.1
5,278,715	-				+1.2
5,278,715	-				+1.2
5,278,715	-				-0.4
5,278,715	-				+0.5
5,278,715	-				+0.2
5,278,715	-				+0.5
5,278,715	-				+0.2
5,278,715	-				+0.2
5,278,715	-				-3.6
5,278,715	-				-2.1
5,278,715	-				+0.2
5,278,715	-				-0.2
5,278,715	-				-1.2
5,278,715	-				-0.4
5,278,715	-				-1.2
5,278,717	+				-0.5
5,278,717	+				+0.5
5,278,722	+				-1.2
5,278,722	+				+0.1
5,278,722	+				-0.0
5,278,722	+				+1.5
5,278,722	+				-1.2
5,278,725	-				+0.0
5,278,725	-				-0.8
5,278,725	-				+1.0
5,278,725	-				-1.6
5,278,725	-				-0.4
5,278,729	+				+0.4
5,278,730	-				-0.3
5,278,730	-				+0.7
5,278,730	-				-0.8
5,278,730	-				-0.8
5,278,730	-				+0.4
5,278,740	-				-2.4
5,278,754	-				-0.1
5,278,780	+				+0.2
5,278,785	+				+1.2
5,278,798	-				+0.4
5,278,803	+				-0.6
5,278,804	+				+1.2
5,278,804	+				+0.1
5,278,811	-				-0.4
5,278,815	+				-2.4
5,278,837	+				-2.5
5,278,839	+				+2.2
5,278,839	+				+0.2
5,278,859	+		BWI76_RS25395	0.11	-0.8
5,278,876	+		BWI76_RS25395	0.14	-2.3
5,278,878	+		BWI76_RS25395	0.14	+0.3
5,278,878	+				+1.2
5,278,878	+		BWI76_RS25395	0.14	+0.1
5,278,878	+		BWI76_RS25395	0.14	-1.6
5,278,878	+		BWI76_RS25395	0.14	+1.2
5,278,878	+		BWI76_RS25395	0.14	-0.2
5,278,878	+		BWI76_RS25395	0.14	+0.2
5,278,878	+		BWI76_RS25395	0.14	-2.3
5,278,878	+		BWI76_RS25395	0.14	-2.3
5,278,878	+		BWI76_RS25395	0.14	-0.4
5,278,878	+		BWI76_RS25395	0.14	+1.6
5,278,878	+				-0.4
5,278,878	+		BWI76_RS25395	0.14	-0.4
5,278,878	+		BWI76_RS25395	0.14	-0.8
5,278,886	-		BWI76_RS25395	0.15	+1.1
5,278,886	-		BWI76_RS25395	0.15	+0.9
5,278,886	-		BWI76_RS25395	0.15	-0.7
5,278,886	-		BWI76_RS25395	0.15	+0.2
5,278,886	-		BWI76_RS25395	0.15	-1.6
5,278,886	-		BWI76_RS25395	0.15	-0.4
5,278,886	-		BWI76_RS25395	0.15	-2.4
5,278,886	-		BWI76_RS25395	0.15	-0.4
5,278,886	-		BWI76_RS25395	0.15	-2.9
5,278,923	+		BWI76_RS25395	0.21	-2.2
5,278,931	-		BWI76_RS25395	0.22	-1.6
5,278,931	-		BWI76_RS25395	0.22	-1.6
5,278,931	-		BWI76_RS25395	0.22	+0.6
5,278,931	-		BWI76_RS25395	0.22	+1.3
5,278,932	+		BWI76_RS25395	0.23	-2.5
5,278,932	+		BWI76_RS25395	0.23	-3.2
5,278,936	+		BWI76_RS25395	0.23	+0.2
5,278,938	+		BWI76_RS25395	0.24	-0.8
5,278,938	+		BWI76_RS25395	0.24	-0.8
5,278,938	+		BWI76_RS25395	0.24	-2.6
5,278,938	+		BWI76_RS25395	0.24	-3.1
5,278,938	+		BWI76_RS25395	0.24	-1.6
5,278,938	+		BWI76_RS25395	0.24	-2.6
5,278,938	+		BWI76_RS25395	0.24	+0.2
5,278,938	+		BWI76_RS25395	0.24	+0.9
5,278,938	+		BWI76_RS25395	0.24	-2.2
5,278,938	+		BWI76_RS25395	0.24	-1.9
5,278,938	+		BWI76_RS25395	0.24	+0.7
5,278,938	+		BWI76_RS25395	0.24	-0.8
5,278,938	+		BWI76_RS25395	0.24	+1.2
5,278,938	+		BWI76_RS25395	0.24	+0.2
5,278,938	+		BWI76_RS25395	0.24	-0.1
5,278,938	+		BWI76_RS25395	0.24	+1.2
5,278,938	+		BWI76_RS25395	0.24	+0.8
5,278,938	+		BWI76_RS25395	0.24	-1.2
5,278,940	-		BWI76_RS25395	0.24	+0.8
5,278,945	-		BWI76_RS25395	0.25	+0.7
5,278,946	-		BWI76_RS25395	0.25	+0.3
5,278,946	-		BWI76_RS25395	0.25	+0.8
5,278,946	-		BWI76_RS25395	0.25	-2.7
5,278,946	-				-0.8
5,278,946	-		BWI76_RS25395	0.25	-0.5
5,278,946	-		BWI76_RS25395	0.25	-0.2
5,278,946	-		BWI76_RS25395	0.25	+0.1
5,278,946	-		BWI76_RS25395	0.25	-0.3
5,278,946	-		BWI76_RS25395	0.25	-0.6
5,278,946	-		BWI76_RS25395	0.25	-0.8
5,278,946	-		BWI76_RS25395	0.25	-0.9
5,278,946	-		BWI76_RS25395	0.25	-2.7
5,278,946	-		BWI76_RS25395	0.25	-1.8
5,278,946	-		BWI76_RS25395	0.25	+1.2
5,278,946	-		BWI76_RS25395	0.25	-2.2
5,278,946	-		BWI76_RS25395	0.25	-1.4
5,278,946	-		BWI76_RS25395	0.25	+0.5
5,278,946	-		BWI76_RS25395	0.25	-1.0
5,278,946	-		BWI76_RS25395	0.25	-1.5
5,278,946	-		BWI76_RS25395	0.25	-0.3
5,278,946	-		BWI76_RS25395	0.25	-1.6
5,278,946	-		BWI76_RS25395	0.25	-2.7
5,278,963	-		BWI76_RS25395	0.28	+1.4
5,278,964	-		BWI76_RS25395	0.28	+0.0
5,278,970	-		BWI76_RS25395	0.29	-0.1
5,278,972	-		BWI76_RS25395	0.29	+0.2
5,278,974	+		BWI76_RS25395	0.29	-1.2
5,278,974	+		BWI76_RS25395	0.29	-0.7
5,278,979	+		BWI76_RS25395	0.30	-2.0
5,278,979	+		BWI76_RS25395	0.30	-0.2
5,278,979	+		BWI76_RS25395	0.30	+0.4
5,278,984	+		BWI76_RS25395	0.31	+0.2
5,278,987	-		BWI76_RS25395	0.32	-0.8
5,278,989	+		BWI76_RS25395	0.32	-1.1
5,278,989	+		BWI76_RS25395	0.32	-0.8
5,278,989	+		BWI76_RS25395	0.32	+0.6
5,278,995	+		BWI76_RS25395	0.33	-2.9
5,278,997	-		BWI76_RS25395	0.33	+0.8
5,278,997	-		BWI76_RS25395	0.33	+1.2
5,278,999	+		BWI76_RS25395	0.33	+0.5
5,279,003	-		BWI76_RS25395	0.34	-0.8
5,279,004	+		BWI76_RS25395	0.34	-0.2
5,279,021	-		BWI76_RS25395	0.37	+0.2
5,279,028	+		BWI76_RS25395	0.38	-2.0
5,279,028	+		BWI76_RS25395	0.38	-2.2
5,279,028	+		BWI76_RS25395	0.38	-0.8
5,279,028	+		BWI76_RS25395	0.38	-2.6
5,279,028	+		BWI76_RS25395	0.38	+0.9
5,279,028	+		BWI76_RS25395	0.38	+3.7
5,279,036	-		BWI76_RS25395	0.39	+0.1
5,279,036	-		BWI76_RS25395	0.39	+0.4
5,279,036	-		BWI76_RS25395	0.39	-0.0
5,279,038	+		BWI76_RS25395	0.40	-2.0
5,279,038	+		BWI76_RS25395	0.40	+1.9
5,279,038	+		BWI76_RS25395	0.40	+0.3
5,279,040	+		BWI76_RS25395	0.40	+0.2
5,279,041	-				-0.4
5,279,045	+		BWI76_RS25395	0.41	-2.3
5,279,045	+		BWI76_RS25395	0.41	+0.9
5,279,045	+		BWI76_RS25395	0.41	-0.8
5,279,045	+		BWI76_RS25395	0.41	+1.6
5,279,045	+		BWI76_RS25395	0.41	-0.4
5,279,046	-		BWI76_RS25395	0.41	-1.4
5,279,046	-		BWI76_RS25395	0.41	+0.1
5,279,046	-		BWI76_RS25395	0.41	+0.6
5,279,046	-		BWI76_RS25395	0.41	-0.8
5,279,046	-		BWI76_RS25395	0.41	+0.2
5,279,046	-		BWI76_RS25395	0.41	-1.4
5,279,046	-		BWI76_RS25395	0.41	-0.8
5,279,046	-		BWI76_RS25395	0.41	+0.3
5,279,048	-		BWI76_RS25395	0.41	-3.4
5,279,051	-		BWI76_RS25395	0.42	-2.0
5,279,052	+		BWI76_RS25395	0.42	-2.8
5,279,052	+		BWI76_RS25395	0.42	+1.5
5,279,053	-		BWI76_RS25395	0.42	+2.6
5,279,053	-		BWI76_RS25395	0.42	+1.3
5,279,053	-		BWI76_RS25395	0.42	+0.2
5,279,053	-		BWI76_RS25395	0.42	+0.3
5,279,053	-		BWI76_RS25395	0.42	-1.1
5,279,053	-		BWI76_RS25395	0.42	-4.5
5,279,053	-		BWI76_RS25395	0.42	-0.8
5,279,057	+		BWI76_RS25395	0.43	-2.0
5,279,057	+		BWI76_RS25395	0.43	+1.2
5,279,060	-		BWI76_RS25395	0.43	+0.3
5,279,060	-		BWI76_RS25395	0.43	-0.1
5,279,060	-		BWI76_RS25395	0.43	-0.5
5,279,062	+		BWI76_RS25395	0.44	-0.0
5,279,062	+		BWI76_RS25395	0.44	-1.4
5,279,062	+		BWI76_RS25395	0.44	+0.0
5,279,062	+		BWI76_RS25395	0.44	-0.4
5,279,062	+		BWI76_RS25395	0.44	-2.0
5,279,062	+		BWI76_RS25395	0.44	+2.1
5,279,062	+		BWI76_RS25395	0.44	-0.8
5,279,062	+		BWI76_RS25395	0.44	-1.1
5,279,062	+		BWI76_RS25395	0.44	+1.2
5,279,062	+		BWI76_RS25395	0.44	-2.5
5,279,062	+		BWI76_RS25395	0.44	-0.9
5,279,062	+		BWI76_RS25395	0.44	-0.6
5,279,062	+		BWI76_RS25395	0.44	+0.9
5,279,062	+				+0.2
5,279,065	-		BWI76_RS25395	0.44	-1.6
5,279,067	+		BWI76_RS25395	0.44	-1.2
5,279,070	-		BWI76_RS25395	0.45	+1.4
5,279,070	-		BWI76_RS25395	0.45	+0.5
5,279,070	-		BWI76_RS25395	0.45	-0.3
5,279,070	-		BWI76_RS25395	0.45	-2.3
5,279,070	-		BWI76_RS25395	0.45	-1.4
5,279,070	-		BWI76_RS25395	0.45	-2.0
5,279,070	-		BWI76_RS25395	0.45	+0.2
5,279,070	-		BWI76_RS25395	0.45	+0.5
5,279,070	-		BWI76_RS25395	0.45	+1.7
5,279,070	-		BWI76_RS25395	0.45	-0.1
5,279,070	-		BWI76_RS25395	0.45	-2.4
5,279,070	-		BWI76_RS25395	0.45	-0.1
5,279,070	-		BWI76_RS25395	0.45	-0.7
5,279,070	-		BWI76_RS25395	0.45	+0.2
5,279,070	-		BWI76_RS25395	0.45	-1.8
5,279,070	-		BWI76_RS25395	0.45	-2.0
5,279,070	-		BWI76_RS25395	0.45	+1.2
5,279,074	+		BWI76_RS25395	0.46	-0.0
5,279,075	+		BWI76_RS25395	0.46	+1.2
5,279,075	+		BWI76_RS25395	0.46	-1.2
5,279,075	-		BWI76_RS25395	0.46	-0.1
5,279,075	-		BWI76_RS25395	0.46	+0.2
5,279,082	-				+1.2
5,279,082	-		BWI76_RS25395	0.47	-3.5
5,279,084	+		BWI76_RS25395	0.47	+0.0
5,279,091	-		BWI76_RS25395	0.48	-2.2
5,279,116	+		BWI76_RS25395	0.52	-3.4
5,279,116	+		BWI76_RS25395	0.52	+0.2
5,279,124	-		BWI76_RS25395	0.54	-0.6
5,279,124	-		BWI76_RS25395	0.54	+0.2
5,279,164	+		BWI76_RS25395	0.60	+2.3
5,279,168	+		BWI76_RS25395	0.61	-2.5
5,279,169	+		BWI76_RS25395	0.61	-0.3
5,279,169	+		BWI76_RS25395	0.61	+1.0
5,279,169	+		BWI76_RS25395	0.61	-2.3
5,279,169	+		BWI76_RS25395	0.61	-3.1
5,279,169	+		BWI76_RS25395	0.61	+0.3
5,279,169	+		BWI76_RS25395	0.61	+0.2
5,279,169	+		BWI76_RS25395	0.61	-0.4
5,279,169	+		BWI76_RS25395	0.61	-0.8
5,279,169	+		BWI76_RS25395	0.61	-2.0
5,279,172	-		BWI76_RS25395	0.61	-0.4
5,279,172	-		BWI76_RS25395	0.61	+0.1
5,279,174	+		BWI76_RS25395	0.62	-0.5
5,279,174	+		BWI76_RS25395	0.62	+0.2
5,279,174	+		BWI76_RS25395	0.62	+0.5
5,279,177	-		BWI76_RS25395	0.62	+0.3
5,279,177	-		BWI76_RS25395	0.62	-3.2
5,279,177	-		BWI76_RS25395	0.62	+0.0
5,279,177	-		BWI76_RS25395	0.62	-0.6
5,279,177	-		BWI76_RS25395	0.62	+0.8
5,279,177	-		BWI76_RS25395	0.62	-0.2
5,279,177	-		BWI76_RS25395	0.62	+0.1
5,279,177	-		BWI76_RS25395	0.62	-0.2
5,279,177	-		BWI76_RS25395	0.62	-1.0
5,279,177	-		BWI76_RS25395	0.62	-2.6
5,279,177	-		BWI76_RS25395	0.62	-1.3
5,279,177	-		BWI76_RS25395	0.62	-1.3
5,279,177	-		BWI76_RS25395	0.62	-0.8
5,279,177	-		BWI76_RS25395	0.62	-3.3
5,279,177	-		BWI76_RS25395	0.62	-0.3
5,279,177	-		BWI76_RS25395	0.62	-0.2
5,279,177	-		BWI76_RS25395	0.62	+0.5
5,279,177	-		BWI76_RS25395	0.62	-0.0
5,279,181	-		BWI76_RS25395	0.63	+2.7
5,279,182	-		BWI76_RS25395	0.63	-0.3
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5,279,182	-		BWI76_RS25395	0.63	+0.7
5,279,182	-		BWI76_RS25395	0.63	-1.2
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5,279,220	+		BWI76_RS25395	0.69	-1.6
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5,279,241	-		BWI76_RS25395	0.73	+0.1
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5,279,278	+		BWI76_RS25395	0.79	-2.7
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5,279,304	+		BWI76_RS25395	0.83	-0.1
5,279,304	+		BWI76_RS25395	0.83	-3.2
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5,279,312	-				+1.7
5,279,312	-		BWI76_RS25395	0.84	-1.0
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5,279,319	+		BWI76_RS25395	0.85	+2.1
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5,279,319	+		BWI76_RS25395	0.85	-2.5
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5,279,327	-		BWI76_RS25395	0.87	-1.1
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5,279,360	-				+0.0
5,279,360	-				+0.1
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5,279,440	+				-2.3
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5,279,440	-				+1.2
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5,279,445	+				+0.8
5,279,445	+				-3.6
5,279,445	+				-0.1
5,279,445	+				-2.3
5,279,445	+				+0.4
5,279,445	+				-0.4
5,279,445	+				-1.1
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5,279,445	+				+1.7
5,279,445	+				-1.1
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5,279,448	-				+3.2
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5,279,453	-				+1.6
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5,280,846	+		BWI76_RS25405	0.40	+0.4
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5,281,010	-		BWI76_RS25405	0.53	+0.1
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5,281,176	-		BWI76_RS25405	0.66	+0.2
5,281,289	-		BWI76_RS25405	0.75	+1.7