Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20695 and BWI76_RS20700 overlap by 1 nucleotides BWI76_RS20700 and BWI76_RS20705 overlap by 1 nucleotides BWI76_RS20705 and BWI76_RS20710 are separated by 219 nucleotides
BWI76_RS20695: BWI76_RS20695 - sulfate/thiosulfate transporter permease subunit, at 4,328,951 to 4,329,826
_RS20695
BWI76_RS20700: BWI76_RS20700 - sulfate/thiosulfate transporter subunit, at 4,329,826 to 4,330,659
_RS20700
BWI76_RS20705: BWI76_RS20705 - thiosulfate transporter subunit, at 4,330,659 to 4,331,675
_RS20705
BWI76_RS20710: BWI76_RS20710 - dyp-type peroxidase family protein, at 4,331,895 to 4,332,794
_RS20710
Position (kb) 4330
4331
4332 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 4329.748 kb on + strand at 4329.874 kb on - strand at 4330.165 kb on + strand, within BWI76_RS20700 at 4330.224 kb on - strand, within BWI76_RS20700 at 4330.325 kb on - strand, within BWI76_RS20700 at 4330.512 kb on + strand, within BWI76_RS20700 at 4330.514 kb on + strand, within BWI76_RS20700 at 4330.520 kb on - strand, within BWI76_RS20700 at 4330.980 kb on + strand, within BWI76_RS20705 at 4331.072 kb on - strand, within BWI76_RS20705 at 4331.253 kb on + strand, within BWI76_RS20705 at 4331.340 kb on - strand, within BWI76_RS20705 at 4331.370 kb on - strand, within BWI76_RS20705 at 4331.440 kb on - strand, within BWI76_RS20705 at 4331.509 kb on + strand, within BWI76_RS20705 at 4331.586 kb on + strand at 4331.737 kb on + strand at 4331.874 kb on + strand at 4331.916 kb on - strand at 4332.025 kb on - strand at 4332.106 kb on + strand, within BWI76_RS20710 at 4332.157 kb on - strand, within BWI76_RS20710 at 4332.157 kb on - strand, within BWI76_RS20710 at 4332.245 kb on - strand, within BWI76_RS20710 at 4332.251 kb on + strand, within BWI76_RS20710 at 4332.392 kb on + strand, within BWI76_RS20710 at 4332.482 kb on - strand, within BWI76_RS20710
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 4,329,748 + -4.7 4,329,874 - -0.6 4,330,165 + BWI76_RS20700 0.41 -0.6 4,330,224 - BWI76_RS20700 0.48 -0.8 4,330,325 - BWI76_RS20700 0.60 -0.0 4,330,512 + BWI76_RS20700 0.82 -1.8 4,330,514 + BWI76_RS20700 0.82 +1.0 4,330,520 - BWI76_RS20700 0.83 -0.4 4,330,980 + BWI76_RS20705 0.32 -2.1 4,331,072 - BWI76_RS20705 0.41 -0.6 4,331,253 + BWI76_RS20705 0.58 -1.3 4,331,340 - BWI76_RS20705 0.67 -0.7 4,331,370 - BWI76_RS20705 0.70 -1.3 4,331,440 - BWI76_RS20705 0.77 -1.1 4,331,509 + BWI76_RS20705 0.84 -1.1 4,331,586 + -3.4 4,331,737 + -0.3 4,331,874 + -0.8 4,331,916 - -0.3 4,332,025 - -1.0 4,332,106 + BWI76_RS20710 0.23 -0.4 4,332,157 - BWI76_RS20710 0.29 +0.8 4,332,157 - BWI76_RS20710 0.29 -1.0 4,332,245 - BWI76_RS20710 0.39 +0.1 4,332,251 + BWI76_RS20710 0.40 +0.3 4,332,392 + BWI76_RS20710 0.55 -0.5 4,332,482 - BWI76_RS20710 0.65 -1.4
Or see this region's nucleotide sequence