Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15630 and BWI76_RS15635 are separated by 17 nucleotides BWI76_RS15635 and BWI76_RS15640 are separated by 12 nucleotides BWI76_RS15640 and BWI76_RS15645 are separated by 3 nucleotides BWI76_RS15645 and BWI76_RS15650 overlap by 41 nucleotides
BWI76_RS15630: BWI76_RS15630 - hypothetical protein, at 3,266,780 to 3,267,856
_RS15630
BWI76_RS15635: BWI76_RS15635 - hypothetical protein, at 3,267,874 to 3,268,320
_RS15635
BWI76_RS15640: BWI76_RS15640 - hypothetical protein, at 3,268,333 to 3,269,598
_RS15640
BWI76_RS15645: BWI76_RS15645 - gp6, at 3,269,602 to 3,270,528
_RS15645
BWI76_RS15650: BWI76_RS15650 - gp5, at 3,270,488 to 3,271,837
_RS15650
Position (kb)
3268
3269
3270 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 3267.495 kb on - strand, within BWI76_RS15630 at 3267.965 kb on - strand, within BWI76_RS15635 at 3267.965 kb on - strand, within BWI76_RS15635 at 3268.068 kb on - strand, within BWI76_RS15635 at 3268.143 kb on - strand, within BWI76_RS15635 at 3268.187 kb on + strand, within BWI76_RS15635 at 3268.271 kb on + strand, within BWI76_RS15635 at 3268.279 kb on - strand at 3268.771 kb on + strand, within BWI76_RS15640 at 3268.836 kb on - strand, within BWI76_RS15640 at 3269.021 kb on + strand, within BWI76_RS15640 at 3269.054 kb on - strand, within BWI76_RS15640 at 3269.192 kb on + strand, within BWI76_RS15640 at 3269.412 kb on + strand, within BWI76_RS15640 at 3269.420 kb on - strand, within BWI76_RS15640 at 3269.615 kb on - strand at 3269.616 kb on + strand at 3269.822 kb on + strand, within BWI76_RS15645 at 3269.978 kb on + strand, within BWI76_RS15645 at 3270.003 kb on + strand, within BWI76_RS15645 at 3270.065 kb on - strand, within BWI76_RS15645 at 3270.128 kb on - strand, within BWI76_RS15645 at 3270.207 kb on + strand, within BWI76_RS15645 at 3270.207 kb on + strand, within BWI76_RS15645 at 3270.454 kb on - strand at 3270.507 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 3,267,495 - BWI76_RS15630 0.66 -0.2 3,267,965 - BWI76_RS15635 0.20 +0.7 3,267,965 - BWI76_RS15635 0.20 +1.7 3,268,068 - BWI76_RS15635 0.43 -2.1 3,268,143 - BWI76_RS15635 0.60 +0.1 3,268,187 + BWI76_RS15635 0.70 -1.8 3,268,271 + BWI76_RS15635 0.89 +2.3 3,268,279 - -4.2 3,268,771 + BWI76_RS15640 0.35 -0.8 3,268,836 - BWI76_RS15640 0.40 -1.6 3,269,021 + BWI76_RS15640 0.54 -2.3 3,269,054 - BWI76_RS15640 0.57 -0.9 3,269,192 + BWI76_RS15640 0.68 +1.6 3,269,412 + BWI76_RS15640 0.85 -2.7 3,269,420 - BWI76_RS15640 0.86 -0.3 3,269,615 - +0.1 3,269,616 + -1.5 3,269,822 + BWI76_RS15645 0.24 -0.6 3,269,978 + BWI76_RS15645 0.41 -0.6 3,270,003 + BWI76_RS15645 0.43 -1.4 3,270,065 - BWI76_RS15645 0.50 -0.4 3,270,128 - BWI76_RS15645 0.57 -0.3 3,270,207 + BWI76_RS15645 0.65 -0.3 3,270,207 + BWI76_RS15645 0.65 -3.4 3,270,454 - -3.3 3,270,507 + -5.4
Or see this region's nucleotide sequence