Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12495

Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS12490 and BWI76_RS12495 are separated by 41 nucleotidesBWI76_RS12495 and BWI76_RS12500 are separated by 101 nucleotides BWI76_RS12490: BWI76_RS12490 - AbrB family transcriptional regulator, at 2,609,021 to 2,610,076 _RS12490 BWI76_RS12495: BWI76_RS12495 - 2-Cys peroxiredoxin, at 2,610,118 to 2,610,627 _RS12495 BWI76_RS12500: BWI76_RS12500 - dipeptide epimerase, at 2,610,729 to 2,611,694 _RS12500 Position (kb) 2610 2611Strain fitness (log2 ratio) -3 -2 -1 0 1at 2609.419 kb on + strand, within BWI76_RS12490at 2609.567 kb on - strand, within BWI76_RS12490at 2609.661 kb on + strand, within BWI76_RS12490at 2609.745 kb on - strand, within BWI76_RS12490at 2609.988 kb on - strandat 2610.154 kb on + strandat 2610.527 kb on + strand, within BWI76_RS12495at 2611.041 kb on - strand, within BWI76_RS12500at 2611.055 kb on + strand, within BWI76_RS12500at 2611.079 kb on + strand, within BWI76_RS12500at 2611.497 kb on + strand, within BWI76_RS12500

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
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2,609,419 + BWI76_RS12490 0.38 +0.7
2,609,567 - BWI76_RS12490 0.52 -0.4
2,609,661 + BWI76_RS12490 0.61 +0.8
2,609,745 - BWI76_RS12490 0.69 +1.0
2,609,988 - -2.4
2,610,154 + -1.8
2,610,527 + BWI76_RS12495 0.80 -3.6
2,611,041 - BWI76_RS12500 0.32 +0.3
2,611,055 + BWI76_RS12500 0.34 -1.2
2,611,079 + BWI76_RS12500 0.36 +1.7
2,611,497 + BWI76_RS12500 0.80 -0.3

Or see this region's nucleotide sequence