Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11765 and BWI76_RS11770 are separated by 134 nucleotides BWI76_RS11770 and BWI76_RS11775 are separated by 91 nucleotides
BWI76_RS11765: BWI76_RS11765 - bifunctional transporter/kinase, at 2,475,327 to 2,476,718
_RS11765
BWI76_RS11770: BWI76_RS11770 - hypothetical protein, at 2,476,853 to 2,477,443
_RS11770
BWI76_RS11775: BWI76_RS11775 - 2-deoxy-D-gluconate 3-dehydrogenase, at 2,477,535 to 2,478,296
_RS11775
Position (kb)
2476
2477
2478 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2475.854 kb on + strand, within BWI76_RS11765 at 2476.002 kb on + strand, within BWI76_RS11765 at 2476.055 kb on - strand, within BWI76_RS11765 at 2476.239 kb on - strand, within BWI76_RS11765 at 2476.273 kb on + strand, within BWI76_RS11765 at 2476.338 kb on + strand, within BWI76_RS11765 at 2476.356 kb on - strand, within BWI76_RS11765 at 2476.395 kb on - strand, within BWI76_RS11765 at 2476.532 kb on + strand, within BWI76_RS11765 at 2476.638 kb on + strand at 2476.643 kb on - strand at 2476.937 kb on + strand, within BWI76_RS11770 at 2476.976 kb on - strand, within BWI76_RS11770 at 2477.275 kb on - strand, within BWI76_RS11770 at 2477.451 kb on + strand at 2477.575 kb on - strand at 2477.628 kb on - strand, within BWI76_RS11775 at 2477.829 kb on - strand, within BWI76_RS11775 at 2478.275 kb on + strand at 2478.283 kb on - strand at 2478.340 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 2,475,854 + BWI76_RS11765 0.38 +0.4 2,476,002 + BWI76_RS11765 0.48 +0.5 2,476,055 - BWI76_RS11765 0.52 -0.3 2,476,239 - BWI76_RS11765 0.66 +0.8 2,476,273 + BWI76_RS11765 0.68 +0.4 2,476,338 + BWI76_RS11765 0.73 +0.5 2,476,356 - BWI76_RS11765 0.74 +0.8 2,476,395 - BWI76_RS11765 0.77 +2.0 2,476,532 + BWI76_RS11765 0.87 +0.4 2,476,638 + -1.0 2,476,643 - +0.1 2,476,937 + BWI76_RS11770 0.14 -0.1 2,476,976 - BWI76_RS11770 0.21 +1.3 2,477,275 - BWI76_RS11770 0.71 +1.9 2,477,451 + +1.0 2,477,575 - +0.7 2,477,628 - BWI76_RS11775 0.12 -0.0 2,477,829 - BWI76_RS11775 0.39 +0.5 2,478,275 + +0.8 2,478,283 - -1.7 2,478,340 + -1.8
Or see this region's nucleotide sequence