Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11725

Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
2,466,391	-				-1.2
2,466,391	-				-0.9
2,466,391	-				-1.8
2,466,402	-				-2.2
2,466,451	+				+0.3
2,466,583	-				-0.0
2,466,620	-		BWI76_RS11720	0.14	-0.0
2,466,620	-		BWI76_RS11720	0.14	+0.6
2,466,620	-		BWI76_RS11720	0.14	+1.9
2,466,626	-		BWI76_RS11720	0.16	-0.5
2,466,639	+		BWI76_RS11720	0.19	+0.9
2,466,639	+		BWI76_RS11720	0.19	-1.9
2,466,639	+		BWI76_RS11720	0.19	+0.5
2,466,639	+		BWI76_RS11720	0.19	+0.4
2,466,639	+		BWI76_RS11720	0.19	+1.4
2,466,639	+		BWI76_RS11720	0.19	+0.7
2,466,639	+		BWI76_RS11720	0.19	+0.8
2,466,639	+		BWI76_RS11720	0.19	+0.1
2,466,647	-		BWI76_RS11720	0.22	-3.1
2,466,647	-		BWI76_RS11720	0.22	-2.8
2,466,647	-		BWI76_RS11720	0.22	-1.5
2,466,647	-		BWI76_RS11720	0.22	+1.4
2,466,647	-		BWI76_RS11720	0.22	-2.5
2,466,647	-		BWI76_RS11720	0.22	+1.2
2,466,647	-		BWI76_RS11720	0.22	+0.6
2,466,647	-		BWI76_RS11720	0.22	-1.9
2,466,647	-		BWI76_RS11720	0.22	-1.5
2,466,647	-		BWI76_RS11720	0.22	+0.7
2,466,647	-		BWI76_RS11720	0.22	-1.5
2,466,647	-		BWI76_RS11720	0.22	+0.2
2,466,647	-		BWI76_RS11720	0.22	+0.7
2,466,750	+		BWI76_RS11720	0.52	+0.9
2,466,894	-				+0.9
2,466,894	-				+0.1
2,466,981	-				-0.3
2,466,983	-				+1.1
2,467,031	-				-0.0
2,467,076	+				-1.2
2,467,088	+				+1.2
2,467,090	+				-2.3
2,467,140	+				+1.1
2,467,140	+				-0.7
2,467,148	-				-1.2
2,467,148	-				+0.3
2,467,148	-				-0.9
2,467,148	-				-0.2
2,467,148	-				+1.4
2,467,148	-				+1.1
2,467,174	-				+0.5
2,467,215	+				-0.1
2,467,220	+				+0.1
2,467,220	+				-0.6
2,467,220	+				+0.5
2,467,225	+				-1.7
2,467,228	-				+0.8
2,467,228	-				-1.3
2,467,228	-				-3.0
2,467,235	+		BWI76_RS11725	0.12	-3.0
2,467,236	-		BWI76_RS11725	0.12	-0.9
2,467,238	-		BWI76_RS11725	0.13	+0.4
2,467,243	-		BWI76_RS11725	0.14	+0.4
2,467,243	-		BWI76_RS11725	0.14	-0.3
2,467,246	-		BWI76_RS11725	0.15	+1.5
2,467,282	+		BWI76_RS11725	0.26	+1.6
2,467,298	-		BWI76_RS11725	0.31	+0.6
2,467,319	+		BWI76_RS11725	0.38	+0.8
2,467,327	-		BWI76_RS11725	0.40	-0.5
2,467,390	+		BWI76_RS11725	0.60	-3.2
2,467,440	+		BWI76_RS11725	0.76	-2.1
2,467,445	+		BWI76_RS11725	0.77	+0.4
2,467,448	+		BWI76_RS11725	0.78	+1.1
2,467,572	+				+1.2
2,467,575	+				-0.1
2,467,607	+				-0.8
2,467,636	+				+0.2
2,467,675	+				+1.1
2,467,754	-				-0.5
2,467,765	-				+1.4
2,467,809	-				-1.4
2,467,813	-				-0.1
2,467,884	+		BWI76_RS11730	0.15	-2.8
2,467,884	+		BWI76_RS11730	0.15	-0.7
2,467,900	+		BWI76_RS11730	0.16	+0.1
2,467,900	+		BWI76_RS11730	0.16	+1.5
2,467,903	-		BWI76_RS11730	0.16	-1.9
2,467,910	+		BWI76_RS11730	0.16	+0.1
2,467,910	+		BWI76_RS11730	0.16	-1.2
2,467,918	+		BWI76_RS11730	0.17	+0.1
2,467,926	-		BWI76_RS11730	0.18	-2.3
2,467,926	-		BWI76_RS11730	0.18	+1.8
2,467,927	-		BWI76_RS11730	0.18	+0.1
2,467,933	+		BWI76_RS11730	0.18	+1.1
2,467,937	-		BWI76_RS11730	0.18	+0.3
2,467,940	+		BWI76_RS11730	0.19	+0.7
2,467,940	+		BWI76_RS11730	0.19	+1.7
2,467,941	+		BWI76_RS11730	0.19	-1.7
2,467,948	-		BWI76_RS11730	0.19	-1.9
2,467,949	-		BWI76_RS11730	0.19	+1.1
2,467,949	-		BWI76_RS11730	0.19	+0.0
2,467,960	+		BWI76_RS11730	0.20	-3.6
2,467,960	+		BWI76_RS11730	0.20	+0.7
2,467,960	+		BWI76_RS11730	0.20	+0.6
2,467,960	+		BWI76_RS11730	0.20	-0.5
2,467,960	+		BWI76_RS11730	0.20	-2.3
2,467,988	+		BWI76_RS11730	0.22	-2.7
2,467,993	+		BWI76_RS11730	0.23	-0.9
2,467,993	+		BWI76_RS11730	0.23	-2.2
2,468,001	-		BWI76_RS11730	0.23	+1.1
2,468,001	-		BWI76_RS11730	0.23	-0.5
2,468,001	-		BWI76_RS11730	0.23	-1.2
2,468,004	+		BWI76_RS11730	0.23	-0.3
2,468,012	+		BWI76_RS11730	0.24	+0.8
2,468,012	+		BWI76_RS11730	0.24	-1.2
2,468,012	+		BWI76_RS11730	0.24	-2.5
2,468,012	+		BWI76_RS11730	0.24	-1.3
2,468,025	-		BWI76_RS11730	0.25	-0.7
2,468,025	-		BWI76_RS11730	0.25	-0.2
2,468,045	-		BWI76_RS11730	0.26	+1.1
2,468,045	-		BWI76_RS11730	0.26	+1.1
2,468,063	-		BWI76_RS11730	0.28	-1.2
2,468,073	-		BWI76_RS11730	0.28	-2.6
2,468,080	-		BWI76_RS11730	0.29	-0.6
2,468,085	+		BWI76_RS11730	0.29	+0.5
2,468,090	+		BWI76_RS11730	0.30	+2.9
2,468,106	+		BWI76_RS11730	0.31	-1.7
2,468,152	+		BWI76_RS11730	0.34	+0.7
2,468,152	+		BWI76_RS11730	0.34	-0.3
2,468,160	-		BWI76_RS11730	0.35	-2.6
2,468,160	-		BWI76_RS11730	0.35	-2.8
2,468,265	+		BWI76_RS11730	0.43	+1.2
2,468,331	-		BWI76_RS11730	0.47	+1.9
2,468,366	-		BWI76_RS11730	0.50	-1.4
2,468,379	+		BWI76_RS11730	0.51	-0.6
2,468,436	-		BWI76_RS11730	0.55	+0.4
2,468,462	-		BWI76_RS11730	0.57	+0.3