Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11480 and BWI76_RS11485 are separated by 130 nucleotides BWI76_RS11485 and BWI76_RS11490 are separated by 426 nucleotides
BWI76_RS11480: BWI76_RS11480 - hypothetical protein, at 2,415,938 to 2,417,221
_RS11480
BWI76_RS11485: BWI76_RS11485 - serine protein kinase PrkA, at 2,417,352 to 2,419,286
_RS11485
BWI76_RS11490: BWI76_RS11490 - MltA-interacting protein MipA, at 2,419,713 to 2,420,459
_RS11490
Position (kb)
2417
2418
2419
2420 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2416.588 kb on + strand, within BWI76_RS11480 at 2416.632 kb on + strand, within BWI76_RS11480 at 2416.762 kb on - strand, within BWI76_RS11480 at 2416.907 kb on + strand, within BWI76_RS11480 at 2416.915 kb on - strand, within BWI76_RS11480 at 2417.140 kb on + strand at 2417.219 kb on + strand at 2417.227 kb on - strand at 2417.235 kb on - strand at 2417.336 kb on + strand at 2417.409 kb on + strand at 2417.410 kb on - strand at 2417.789 kb on + strand, within BWI76_RS11485 at 2417.790 kb on + strand, within BWI76_RS11485 at 2417.821 kb on + strand, within BWI76_RS11485 at 2418.170 kb on + strand, within BWI76_RS11485 at 2418.321 kb on + strand, within BWI76_RS11485 at 2418.325 kb on + strand, within BWI76_RS11485 at 2418.358 kb on - strand, within BWI76_RS11485 at 2418.905 kb on + strand, within BWI76_RS11485 at 2418.905 kb on + strand, within BWI76_RS11485 at 2418.921 kb on - strand, within BWI76_RS11485 at 2419.179 kb on + strand at 2419.316 kb on + strand at 2419.324 kb on - strand at 2419.375 kb on + strand at 2419.400 kb on - strand at 2419.400 kb on - strand at 2419.400 kb on - strand at 2419.582 kb on + strand at 2419.667 kb on + strand at 2419.709 kb on - strand at 2419.760 kb on + strand at 2419.792 kb on + strand, within BWI76_RS11490 at 2420.053 kb on + strand, within BWI76_RS11490 at 2420.199 kb on + strand, within BWI76_RS11490 at 2420.228 kb on + strand, within BWI76_RS11490
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 2,416,588 + BWI76_RS11480 0.51 -1.6 2,416,632 + BWI76_RS11480 0.54 +0.8 2,416,762 - BWI76_RS11480 0.64 +1.4 2,416,907 + BWI76_RS11480 0.75 +0.7 2,416,915 - BWI76_RS11480 0.76 +0.8 2,417,140 + +1.0 2,417,219 + +1.5 2,417,227 - +0.5 2,417,235 - +1.2 2,417,336 + +1.6 2,417,409 + -0.3 2,417,410 - +1.0 2,417,789 + BWI76_RS11485 0.23 +1.0 2,417,790 + BWI76_RS11485 0.23 +1.2 2,417,821 + BWI76_RS11485 0.24 +1.0 2,418,170 + BWI76_RS11485 0.42 +1.0 2,418,321 + BWI76_RS11485 0.50 +1.3 2,418,325 + BWI76_RS11485 0.50 +1.6 2,418,358 - BWI76_RS11485 0.52 +1.7 2,418,905 + BWI76_RS11485 0.80 +0.9 2,418,905 + BWI76_RS11485 0.80 +0.6 2,418,921 - BWI76_RS11485 0.81 +0.0 2,419,179 + +0.7 2,419,316 + +0.6 2,419,324 - +0.5 2,419,375 + -1.6 2,419,400 - -0.7 2,419,400 - +1.0 2,419,400 - +0.5 2,419,582 + +0.9 2,419,667 + +0.7 2,419,709 - +1.0 2,419,760 + -2.7 2,419,792 + BWI76_RS11490 0.11 +2.0 2,420,053 + BWI76_RS11490 0.46 +0.0 2,420,199 + BWI76_RS11490 0.65 +0.3 2,420,228 + BWI76_RS11490 0.69 +0.8
Or see this region's nucleotide sequence