Strain Fitness in Shewanella oneidensis MR-1 around SO3608

Experiment: fumarate electron acceptor

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	fumarate electron acceptor
3,768,953	+				-0.9
3,768,953	+				+1.2
3,768,953	+				+3.0
3,768,954	+				+0.7
3,768,954	+				-2.0
3,768,954	+				-2.5
3,768,954	+				+0.3
3,768,954	+				+0.3
3,768,954	+				+1.0
3,768,954	+				-1.2
3,768,954	+				+0.7
3,768,954	+				-1.2
3,768,954	+				+0.7
3,768,954	+				+0.2
3,768,954	+				-2.2
3,768,959	+				-0.5
3,768,964	+				+0.9
3,768,964	+				-1.3
3,768,964	+				+0.7
3,768,964	+				+0.8
3,768,972	+				+1.4
3,768,981	+				-3.1
3,769,078	-				-0.6
3,769,101	+		SO3608	0.11	-2.6
3,769,107	+		SO3608	0.12	+0.1
3,769,107	+		SO3608	0.12	+0.7
3,769,107	+		SO3608	0.12	-0.8
3,769,107	+		SO3608	0.12	-0.3
3,769,107	+		SO3608	0.12	-0.4
3,769,107	+		SO3608	0.12	-0.3
3,769,109	-		SO3608	0.12	-0.2
3,769,115	-		SO3608	0.13	-4.2
3,769,115	-		SO3608	0.13	-0.0
3,769,115	-		SO3608	0.13	-1.0
3,769,115	-		SO3608	0.13	-0.6
3,769,115	-		SO3608	0.13	+1.7
3,769,115	-		SO3608	0.13	+0.1
3,769,120	-		SO3608	0.13	-3.9
3,769,180	+		SO3608	0.18	-0.2
3,769,180	+		SO3608	0.18	-3.0
3,769,180	+		SO3608	0.18	-1.7
3,769,188	-		SO3608	0.19	-1.0
3,769,202	+		SO3608	0.20	+1.8
3,769,202	+		SO3608	0.20	-0.7
3,769,202	+		SO3608	0.20	+0.1
3,769,202	+		SO3608	0.20	-2.3
3,769,202	+		SO3608	0.20	-0.2
3,769,210	-		SO3608	0.21	+1.8
3,769,210	-		SO3608	0.21	+1.1
3,769,210	-		SO3608	0.21	+0.2
3,769,210	-		SO3608	0.21	-1.8
3,769,215	-		SO3608	0.22	+1.9
3,769,216	+		SO3608	0.22	+0.2
3,769,216	+		SO3608	0.22	-1.5
3,769,216	+		SO3608	0.22	+0.8
3,769,216	+		SO3608	0.22	+0.2
3,769,224	-		SO3608	0.22	-2.5
3,769,224	-		SO3608	0.22	+2.5
3,769,226	+		SO3608	0.23	+0.0
3,769,226	+		SO3608	0.23	-2.4
3,769,226	+		SO3608	0.23	+1.2
3,769,226	+		SO3608	0.23	-0.4
3,769,226	+		SO3608	0.23	+1.2
3,769,234	-		SO3608	0.23	-1.4
3,769,234	-		SO3608	0.23	-1.9
3,769,234	-		SO3608	0.23	+1.0
3,769,236	+		SO3608	0.23	+0.3
3,769,236	+		SO3608	0.23	-2.6
3,769,241	+		SO3608	0.24	+0.7
3,769,251	+		SO3608	0.25	-0.2
3,769,251	+		SO3608	0.25	+1.5
3,769,251	+		SO3608	0.25	-1.7
3,769,251	+		SO3608	0.25	+0.6
3,769,251	+		SO3608	0.25	-1.2
3,769,257	+		SO3608	0.25	+1.1
3,769,257	+		SO3608	0.25	-0.7
3,769,268	+		SO3608	0.26	-0.1
3,769,270	+		SO3608	0.27	+2.4
3,769,270	+		SO3608	0.27	+0.6
3,769,270	+		SO3608	0.27	-0.2
3,769,270	+		SO3608	0.27	-0.6
3,769,270	+		SO3608	0.27	+1.1
3,769,270	+		SO3608	0.27	-0.6
3,769,270	+		SO3608	0.27	+0.7
3,769,270	+		SO3608	0.27	-0.4
3,769,270	+		SO3608	0.27	+1.1
3,769,270	+		SO3608	0.27	-3.0
3,769,270	+		SO3608	0.27	+1.2
3,769,270	+		SO3608	0.27	+0.2
3,769,270	+		SO3608	0.27	-0.3
3,769,270	+		SO3608	0.27	-1.5
3,769,270	+		SO3608	0.27	+0.4
3,769,270	+		SO3608	0.27	-1.6
3,769,270	+		SO3608	0.27	+1.8
3,769,270	+		SO3608	0.27	+0.1
3,769,270	+		SO3608	0.27	-0.1
3,769,270	+		SO3608	0.27	+3.2
3,769,270	+		SO3608	0.27	-3.5
3,769,270	+		SO3608	0.27	+0.3
3,769,270	+		SO3608	0.27	-1.7
3,769,270	+		SO3608	0.27	-0.4
3,769,270	+		SO3608	0.27	+0.0
3,769,270	+		SO3608	0.27	+0.8
3,769,270	+		SO3608	0.27	+0.8
3,769,270	+		SO3608	0.27	+0.3
3,769,270	+		SO3608	0.27	+0.5
3,769,270	+		SO3608	0.27	-1.9
3,769,278	-		SO3608	0.27	+0.5
3,769,278	-		SO3608	0.27	+2.2
3,769,278	-		SO3608	0.27	-0.6
3,769,278	-		SO3608	0.27	-3.0
3,769,278	-		SO3608	0.27	-0.2
3,769,278	-		SO3608	0.27	-2.0
3,769,278	-		SO3608	0.27	+0.9
3,769,278	-		SO3608	0.27	+0.2
3,769,278	-		SO3608	0.27	-1.2
3,769,278	-		SO3608	0.27	-0.7
3,769,278	-		SO3608	0.27	+0.3
3,769,278	-		SO3608	0.27	-3.0
3,769,278	-		SO3608	0.27	-0.0
3,769,278	-		SO3608	0.27	-0.1
3,769,278	-		SO3608	0.27	-1.6
3,769,278	-		SO3608	0.27	+0.2
3,769,278	-		SO3608	0.27	+0.6
3,769,278	-		SO3608	0.27	+1.0
3,769,278	-		SO3608	0.27	-0.2
3,769,278	-		SO3608	0.27	+1.4
3,769,278	-		SO3608	0.27	-1.0
3,769,278	-		SO3608	0.27	-3.1
3,769,278	-		SO3608	0.27	+0.1
3,769,278	-		SO3608	0.27	-0.6
3,769,278	-		SO3608	0.27	+1.2
3,769,278	-		SO3608	0.27	+1.2
3,769,278	-		SO3608	0.27	-0.3
3,769,278	-		SO3608	0.27	-0.1
3,769,278	-		SO3608	0.27	-2.7
3,769,278	-		SO3608	0.27	+1.8
3,769,278	-		SO3608	0.27	+2.6
3,769,278	-		SO3608	0.27	+0.2
3,769,278	-		SO3608	0.27	-1.7
3,769,278	-		SO3608	0.27	+0.1
3,769,278	-		SO3608	0.27	+1.6
3,769,285	+		SO3608	0.28	-0.6
3,769,285	+		SO3608	0.28	-1.2
3,769,327	+		SO3608	0.32	-1.4
3,769,336	+		SO3608	0.32	-2.2
3,769,338	+		SO3608	0.33	-0.3
3,769,338	+		SO3608	0.33	+1.7
3,769,345	+		SO3608	0.33	-0.4
3,769,358	-		SO3608	0.34	-1.5
3,769,365	+		SO3608	0.35	-1.0
3,769,373	-		SO3608	0.36	+2.3
3,769,439	+		SO3608	0.42	+1.1
3,769,444	+		SO3608	0.42	-1.8
3,769,446	+		SO3608	0.42	-2.0
3,769,453	-		SO3608	0.43	+1.5
3,769,454	-		SO3608	0.43	-3.2
3,769,484	+		SO3608	0.46	-0.5
3,769,492	-		SO3608	0.46	+0.1
3,769,492	-		SO3608	0.46	-1.0
3,769,492	-		SO3608	0.46	+0.7
3,769,541	+		SO3608	0.51	-0.2
3,769,550	-		SO3608	0.52	-0.4
3,769,556	-		SO3608	0.52	+0.5
3,769,583	+		SO3608	0.55	-0.6
3,769,646	+		SO3608	0.60	+0.5
3,769,651	+		SO3608	0.61	-0.0
3,769,651	+		SO3608	0.61	+0.8
3,769,654	-		SO3608	0.61	-0.4
3,769,680	-		SO3608	0.63	-2.9
3,769,683	+		SO3608	0.64	-0.2
3,769,684	+		SO3608	0.64	+1.0
3,769,689	+		SO3608	0.64	+1.3
3,769,689	+		SO3608	0.64	+1.3
3,769,690	-		SO3608	0.64	+0.6
3,769,697	-		SO3608	0.65	-1.2
3,769,697	-		SO3608	0.65	-0.2
3,769,697	-		SO3608	0.65	+0.7
3,769,697	-		SO3608	0.65	-0.3
3,769,699	-		SO3608	0.65	+0.5
3,769,699	-		SO3608	0.65	+0.2
3,769,703	+		SO3608	0.65	+0.2
3,769,715	-		SO3608	0.66	-0.5
3,769,735	-		SO3608	0.68	-0.5
3,769,735	-		SO3608	0.68	+0.7
3,769,775	-		SO3608	0.72	-2.7
3,769,786	+		SO3608	0.73	-1.7
3,769,786	+		SO3608	0.73	+0.1
3,769,786	+		SO3608	0.73	+1.8
3,769,786	+		SO3608	0.73	-3.0
3,769,786	+		SO3608	0.73	+1.5
3,769,786	+		SO3608	0.73	+1.0
3,769,786	+		SO3608	0.73	+0.3
3,769,786	+		SO3608	0.73	+0.2
3,769,786	+		SO3608	0.73	-1.1
3,769,786	+		SO3608	0.73	-0.4
3,769,786	+		SO3608	0.73	+0.8
3,769,786	+		SO3608	0.73	-0.4
3,769,786	+		SO3608	0.73	+0.2
3,769,786	+		SO3608	0.73	-0.6
3,769,786	+		SO3608	0.73	-0.7
3,769,786	+		SO3608	0.73	+0.3
3,769,786	+		SO3608	0.73	-0.2
3,769,786	+		SO3608	0.73	+0.7
3,769,786	+		SO3608	0.73	-0.3
3,769,786	+		SO3608	0.73	-0.0
3,769,786	+		SO3608	0.73	-0.0
3,769,786	+		SO3608	0.73	-1.4
3,769,786	+		SO3608	0.73	+0.8
3,769,786	+		SO3608	0.73	+1.0
3,769,786	+		SO3608	0.73	-1.5
3,769,786	+		SO3608	0.73	-3.0
3,769,786	+		SO3608	0.73	-0.4
3,769,786	+		SO3608	0.73	-1.2
3,769,786	+		SO3608	0.73	+0.2
3,769,786	+		SO3608	0.73	+0.3
3,769,786	+		SO3608	0.73	+0.4
3,769,786	+		SO3608	0.73	-1.7
3,769,786	+		SO3608	0.73	+0.0
3,769,786	+		SO3608	0.73	-2.9
3,769,786	+		SO3608	0.73	-1.0
3,769,786	+		SO3608	0.73	-0.8
3,769,786	+		SO3608	0.73	+0.1
3,769,786	+		SO3608	0.73	+1.0
3,769,786	+		SO3608	0.73	+0.8
3,769,786	+		SO3608	0.73	-1.2
3,769,786	+		SO3608	0.73	-1.5
3,769,786	+		SO3608	0.73	-0.7
3,769,786	+		SO3608	0.73	-0.9
3,769,786	+		SO3608	0.73	-2.3
3,769,786	+		SO3608	0.73	+0.1
3,769,786	+		SO3608	0.73	+0.3
3,769,786	+		SO3608	0.73	-1.0
3,769,786	+		SO3608	0.73	-0.7
3,769,786	+		SO3608	0.73	+0.7
3,769,786	+		SO3608	0.73	+0.7
3,769,786	+		SO3608	0.73	+1.3
3,769,786	+		SO3608	0.73	-3.3
3,769,786	+		SO3608	0.73	+0.4
3,769,786	+		SO3608	0.73	+0.9
3,769,786	+		SO3608	0.73	+0.5
3,769,786	+		SO3608	0.73	-1.1
3,769,786	+		SO3608	0.73	+0.4
3,769,786	+		SO3608	0.73	+3.0
3,769,786	+		SO3608	0.73	+0.6
3,769,786	+		SO3608	0.73	+0.1
3,769,786	+		SO3608	0.73	+0.3
3,769,786	+		SO3608	0.73	+1.2
3,769,786	+		SO3608	0.73	-1.2
3,769,791	+		SO3608	0.73	+0.1
3,769,791	+		SO3608	0.73	+0.2
3,769,791	+		SO3608	0.73	-2.2
3,769,791	+		SO3608	0.73	-0.5
3,769,794	-		SO3608	0.73	-0.5
3,769,794	-		SO3608	0.73	-1.1
3,769,794	-		SO3608	0.73	+0.9
3,769,794	-		SO3608	0.73	-1.9
3,769,794	-		SO3608	0.73	+1.8
3,769,794	-		SO3608	0.73	-1.2
3,769,794	-		SO3608	0.73	-3.2
3,769,794	-		SO3608	0.73	-3.1
3,769,794	-		SO3608	0.73	-0.4
3,769,794	-		SO3608	0.73	+0.1
3,769,794	-		SO3608	0.73	-0.3
3,769,794	-		SO3608	0.73	+1.5
3,769,794	-		SO3608	0.73	-1.0
3,769,794	-		SO3608	0.73	+0.4
3,769,794	-		SO3608	0.73	-0.4
3,769,794	-		SO3608	0.73	-0.1
3,769,794	-		SO3608	0.73	-0.7
3,769,794	-		SO3608	0.73	+0.1
3,769,794	-		SO3608	0.73	+0.3
3,769,794	-		SO3608	0.73	+0.5
3,769,794	-		SO3608	0.73	+0.1
3,769,794	-		SO3608	0.73	-0.9
3,769,794	-		SO3608	0.73	-4.7
3,769,794	-		SO3608	0.73	+0.2
3,769,794	-		SO3608	0.73	-0.0
3,769,794	-		SO3608	0.73	-0.8
3,769,794	-		SO3608	0.73	+0.6
3,769,794	-		SO3608	0.73	+1.1
3,769,794	-		SO3608	0.73	+1.6
3,769,794	-		SO3608	0.73	-0.3
3,769,794	-		SO3608	0.73	+1.1
3,769,794	-		SO3608	0.73	-3.0
3,769,794	-		SO3608	0.73	-1.9
3,769,794	-		SO3608	0.73	-1.2
3,769,794	-		SO3608	0.73	-3.0
3,769,794	-		SO3608	0.73	+0.6
3,769,794	-		SO3608	0.73	+0.6
3,769,794	-		SO3608	0.73	+1.0
3,769,794	-		SO3608	0.73	+1.3
3,769,794	-		SO3608	0.73	-0.6
3,769,794	-		SO3608	0.73	+1.1
3,769,794	-		SO3608	0.73	-4.3
3,769,794	-		SO3608	0.73	-0.2
3,769,794	-		SO3608	0.73	-0.7
3,769,794	-		SO3608	0.73	+0.3
3,769,794	-		SO3608	0.73	-0.9
3,769,794	-		SO3608	0.73	+1.8
3,769,794	-		SO3608	0.73	-1.4
3,769,794	-		SO3608	0.73	-0.7
3,769,794	-		SO3608	0.73	-0.1
3,769,794	-		SO3608	0.73	-0.2
3,769,794	-		SO3608	0.73	-0.3
3,769,794	-		SO3608	0.73	+0.3
3,769,794	-		SO3608	0.73	-0.1
3,769,796	+		SO3608	0.74	+0.6
3,769,797	+		SO3608	0.74	-4.2
3,769,797	+		SO3608	0.74	+0.7
3,769,798	+		SO3608	0.74	-0.7
3,769,799	-		SO3608	0.74	-1.4
3,769,799	-		SO3608	0.74	+1.0
3,769,799	-		SO3608	0.74	+1.7
3,769,799	-		SO3608	0.74	+1.3
3,769,801	+		SO3608	0.74	+0.4
3,769,801	-		SO3608	0.74	-1.8
3,769,801	-		SO3608	0.74	+1.2
3,769,801	-		SO3608	0.74	-1.1
3,769,805	-		SO3608	0.74	-0.4
3,769,807	+		SO3608	0.75	+0.2
3,769,812	+		SO3608	0.75	-2.1
3,769,815	-		SO3608	0.75	+0.2
3,769,838	+		SO3608	0.77	+0.7
3,769,896	+		SO3608	0.83	+0.4
3,769,901	+		SO3608	0.83	+0.3
3,769,936	+		SO3608	0.86	+0.2
3,769,936	+		SO3608	0.86	-0.2
3,769,936	+		SO3608	0.86	+1.5
3,769,936	+		SO3608	0.86	-0.7
3,769,936	+		SO3608	0.86	-0.6
3,769,936	+		SO3608	0.86	+0.7
3,769,936	+		SO3608	0.86	-3.2
3,769,936	+		SO3608	0.86	+0.2
3,769,936	+		SO3608	0.86	+0.0
3,769,936	+		SO3608	0.86	+0.1
3,769,937	-		SO3608	0.86	-1.8
3,769,937	-		SO3608	0.86	+0.4
3,769,941	+		SO3608	0.87	+0.8
3,769,941	+		SO3608	0.87	-0.8
3,769,941	+		SO3608	0.87	-1.7
3,769,944	-		SO3608	0.87	-1.2
3,769,944	-		SO3608	0.87	-0.8
3,769,944	-		SO3608	0.87	+0.8
3,769,944	-		SO3608	0.87	-0.6
3,769,944	-		SO3608	0.87	-0.5
3,769,944	-		SO3608	0.87	+2.5
3,769,944	-		SO3608	0.87	+0.2
3,769,944	-		SO3608	0.87	-0.2
3,769,944	-		SO3608	0.87	+0.7
3,769,944	-		SO3608	0.87	+0.8
3,769,944	-		SO3608	0.87	-0.3
3,769,944	-		SO3608	0.87	+0.8
3,769,944	-		SO3608	0.87	+0.9
3,769,944	-		SO3608	0.87	-2.0
3,769,944	-		SO3608	0.87	+0.2
3,769,947	-		SO3608	0.87	+0.1
3,769,949	-		SO3608	0.87	+1.2
3,769,949	-		SO3608	0.87	-3.3
3,769,949	-		SO3608	0.87	-0.7
3,769,951	+		SO3608	0.88	+0.9
3,769,951	+		SO3608	0.88	+0.7
3,769,951	+		SO3608	0.88	+0.3
3,769,951	+		SO3608	0.88	+0.5
3,769,951	+		SO3608	0.88	+0.0
3,769,951	+		SO3608	0.88	-0.6
3,769,951	+		SO3608	0.88	-2.0
3,769,951	+		SO3608	0.88	-0.2
3,769,951	-		SO3608	0.88	+2.7
3,769,959	+		SO3608	0.88	+1.3
3,769,959	+		SO3608	0.88	-1.2
3,769,959	+		SO3608	0.88	+0.3
3,769,959	-		SO3608	0.88	-0.3
3,769,959	-		SO3608	0.88	+0.9
3,769,959	-		SO3608	0.88	+0.2
3,769,959	-		SO3608	0.88	+0.3
3,769,959	-		SO3608	0.88	+0.5
3,769,959	-		SO3608	0.88	-3.0
3,769,959	-		SO3608	0.88	+0.3
3,769,959	-		SO3608	0.88	+1.2
3,769,959	-		SO3608	0.88	-0.6
3,769,959	-		SO3608	0.88	+0.1
3,769,959	-		SO3608	0.88	+0.8
3,769,959	-		SO3608	0.88	-1.8
3,769,959	-		SO3608	0.88	-0.3
3,769,959	-		SO3608	0.88	+0.5
3,769,983	+				+1.9
3,770,005	-				-0.6
3,770,005	-				-2.0
3,770,065	+				+0.2
3,770,071	-				+0.0
3,770,082	+				+1.1
3,770,090	-				+0.0
3,770,090	-				-1.1
3,770,091	-				+3.7
3,770,172	+				-0.5
3,770,210	-				-1.0
3,770,210	-				+1.0
3,770,215	-				-1.3
3,770,215	-				-0.1
3,770,215	-				-0.6
3,770,215	-				+0.8
3,770,215	-				+0.3
3,770,215	-				-1.2
3,770,215	-				+0.4
3,770,215	-				-0.5
3,770,215	-				+1.4
3,770,215	-				+1.5
3,770,215	-				-3.0
3,770,215	-				-0.0
3,770,215	-				+2.3
3,770,215	-				+0.3
3,770,215	-				+0.7
3,770,215	-				+1.0
3,770,215	-				+0.0
3,770,215	-				-0.9
3,770,215	-				-1.7
3,770,215	-				+1.2
3,770,215	-				-0.3
3,770,215	-				+2.9
3,770,216	-				-3.5
3,770,216	-				-1.2
3,770,216	-				-1.1
3,770,216	-				+0.8