Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17945

Experiment: RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
3,728,606	-		BWI76_RS17930	0.17	-2.4
3,728,684	-		BWI76_RS17930	0.54	+1.1
3,728,687	-		BWI76_RS17930	0.56	+0.1
3,728,733	+		BWI76_RS17930	0.78	-0.5
3,728,741	-		BWI76_RS17930	0.81	-0.2
3,728,763	+				+1.1
3,728,771	-				-0.9
3,728,771	-				-2.2
3,728,771	-				-4.2
3,728,797	-				+1.5
3,728,826	-				-0.3
3,728,860	+		BWI76_RS17935	0.33	+0.1
3,728,868	-		BWI76_RS17935	0.40	+1.1
3,728,868	-		BWI76_RS17935	0.40	+0.3
3,728,913	-				+1.4
3,728,943	+		BWI76_RS17940	0.23	-0.9
3,728,943	-		BWI76_RS17940	0.23	+0.6
3,728,946	-		BWI76_RS17940	0.24	+1.1
3,728,951	-		BWI76_RS17940	0.27	+0.4
3,728,951	-		BWI76_RS17940	0.27	+1.2
3,728,954	-		BWI76_RS17940	0.28	-1.7
3,729,014	+		BWI76_RS17940	0.59	-2.1
3,729,014	+		BWI76_RS17940	0.59	-0.5
3,729,014	+		BWI76_RS17940	0.59	+0.6
3,729,014	+		BWI76_RS17940	0.59	-0.7
3,729,014	+				+0.3
3,729,014	+		BWI76_RS17940	0.59	+1.6
3,729,014	+		BWI76_RS17940	0.59	+0.9
3,729,022	-		BWI76_RS17940	0.63	-0.9
3,729,022	-		BWI76_RS17940	0.63	-0.6
3,729,022	-		BWI76_RS17940	0.63	+2.0
3,729,022	-		BWI76_RS17940	0.63	+0.8
3,729,022	-		BWI76_RS17940	0.63	+2.1
3,729,022	-		BWI76_RS17940	0.63	+1.1
3,729,041	-		BWI76_RS17940	0.73	-2.4
3,729,057	+		BWI76_RS17940	0.81	-1.5
3,729,156	-				-1.7
3,729,185	-				+0.6
3,729,202	+				+1.1
3,729,213	+				+2.4
3,729,235	-				+0.1
3,729,317	+				-0.5
3,729,317	+				-0.9
3,729,325	-				+0.4
3,729,352	+				-0.7
3,729,362	+				-0.6
3,729,362	+				-3.9
3,729,365	+				-1.7
3,729,370	-				-0.2
3,729,370	-				-2.5
3,729,388	-				-1.7
3,729,442	+				-1.3
3,729,442	+				-2.0
3,729,512	+				+1.9
3,729,527	+				+1.0
3,729,527	+				+1.1
3,729,527	-				-1.2
3,729,535	-				+0.3
3,729,542	+				-2.2
3,729,553	+				-3.7
3,729,553	+				+2.1
3,729,553	+				-0.5
3,729,561	-				-2.4
3,729,561	-				-0.1
3,729,561	-				+1.1
3,729,561	-				+0.5
3,729,561	-				-0.9
3,729,561	-				+0.2
3,729,561	-				+0.6
3,729,780	-		BWI76_RS17945	0.77	-3.5
3,729,805	-		BWI76_RS17945	0.86	-1.9
3,729,915	-				-0.4
3,730,096	+				+1.3
3,730,163	+				-0.4
3,730,316	-		BWI76_RS17955	0.39	+1.1
3,730,368	+		BWI76_RS17955	0.60	-2.4
3,730,419	+		BWI76_RS17955	0.82	-0.7
3,730,427	-		BWI76_RS17955	0.85	-0.7
3,730,667	+		BWI76_RS17960	0.20	-1.2
3,730,752	-		BWI76_RS17960	0.31	-1.2