Experiment: MoLS4 with TEMED 10mM (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0603 and DVU0604 overlap by 4 nucleotides DVU0604 and DVU0605 overlap by 18 nucleotides DVU0605 and DVU0606 are separated by 272 nucleotides DVU0606 and ahcY are separated by 25 nucleotides
DVU0603: DVU0603 - hypothetical protein (TIGR), at 673,432 to 673,698
DVU0603
DVU0604: DVU0604 - hypothetical protein (TIGR), at 673,695 to 673,826
DVU0604
DVU0605: DVU0605 - hypothetical protein (TIGR), at 673,809 to 673,937
DVU0605
DVU0606: DVU0606 - transcriptional regulator, ArsR family/methyltransferase, UbiE/COQ5 family (TIGR), at 674,210 to 675,133
DVU0606
DVU0607: ahcY - adenosylhomocysteinase (TIGR), at 675,159 to 676,598
ahcY
Position (kb) 674
675
676 Strain fitness (log2 ratio) -2
-1
0
1 at 673.491 kb on + strand, within DVU0603 at 673.509 kb on - strand, within DVU0603 at 673.613 kb on - strand, within DVU0603 at 673.994 kb on - strand at 674.025 kb on - strand at 674.042 kb on - strand at 674.121 kb on - strand at 674.291 kb on - strand at 674.407 kb on + strand, within DVU0606 at 674.437 kb on - strand, within DVU0606 at 674.454 kb on + strand, within DVU0606 at 674.497 kb on + strand, within DVU0606 at 674.532 kb on + strand, within DVU0606 at 674.579 kb on + strand, within DVU0606 at 674.602 kb on - strand, within DVU0606 at 674.622 kb on - strand, within DVU0606 at 674.644 kb on + strand, within DVU0606 at 674.715 kb on + strand, within DVU0606 at 674.787 kb on + strand, within DVU0606 at 674.872 kb on - strand, within DVU0606 at 674.938 kb on - strand, within DVU0606 at 675.056 kb on - strand at 675.096 kb on - strand at 675.098 kb on - strand at 675.145 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with TEMED 10mM (N) remove 673,491 + DVU0603 0.22 -1.8 673,509 - DVU0603 0.29 -0.4 673,613 - DVU0603 0.68 -0.7 673,994 - -1.9 674,025 - -1.3 674,042 - -0.2 674,121 - -0.3 674,291 - -1.5 674,407 + DVU0606 0.21 -1.9 674,437 - DVU0606 0.25 -1.3 674,454 + DVU0606 0.26 -0.8 674,497 + DVU0606 0.31 -1.9 674,532 + DVU0606 0.35 -0.7 674,579 + DVU0606 0.40 -0.4 674,602 - DVU0606 0.42 -0.9 674,622 - DVU0606 0.45 -0.9 674,644 + DVU0606 0.47 -1.2 674,715 + DVU0606 0.55 -0.7 674,787 + DVU0606 0.62 -2.7 674,872 - DVU0606 0.72 -0.5 674,938 - DVU0606 0.79 -0.9 675,056 - -2.1 675,096 - -1.3 675,098 - -2.1 675,145 + -1.3
Or see this region's nucleotide sequence