Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0809

Experiment: MoLS4 with TEMED 10mM (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntgatA and gatC are separated by 21 nucleotidesgatC and DVU0810 are separated by 19 nucleotides DVU0808: gatA - glutamyl-tRNA(Gln) amidotransferase, A subunit (TIGR), at 893,450 to 894,919 gatA DVU0809: gatC - glutamyl-tRNA(Gln) amidotransferase, C subunit (TIGR), at 894,941 to 895,225 gatC DVU0810: DVU0810 - hypothetical protein (TIGR), at 895,245 to 897,305 DVU0810 Position (kb) 894 895 896Strain fitness (log2 ratio) -1 0 1at 895.250 kb on + strandat 895.264 kb on - strandat 895.288 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with TEMED 10mM (N)
remove
895,250 + -0.1
895,264 - -0.5
895,288 - -1.1

Or see this region's nucleotide sequence