Experiment: Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21205 and BWI76_RS21210 are separated by 112 nucleotides BWI76_RS21210 and BWI76_RS21215 are separated by 112 nucleotides
BWI76_RS21205: BWI76_RS21205 - MFS transporter, at 4,438,937 to 4,440,373
_RS21205
BWI76_RS21210: BWI76_RS21210 - hypothetical protein, at 4,440,486 to 4,443,761
_RS21210
BWI76_RS21215: BWI76_RS21215 - NAGC-like transcriptional regulator, at 4,443,874 to 4,445,070
_RS21215
Position (kb) 4440
4441
4442
4443
4444 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4439.577 kb on + strand, within BWI76_RS21205 at 4439.708 kb on - strand, within BWI76_RS21205 at 4439.923 kb on + strand, within BWI76_RS21205 at 4440.096 kb on + strand, within BWI76_RS21205 at 4440.208 kb on - strand, within BWI76_RS21205 at 4440.212 kb on + strand, within BWI76_RS21205 at 4440.330 kb on + strand at 4440.429 kb on - strand at 4440.441 kb on + strand at 4440.484 kb on - strand at 4440.913 kb on + strand, within BWI76_RS21210 at 4440.921 kb on - strand, within BWI76_RS21210 at 4440.975 kb on - strand, within BWI76_RS21210 at 4441.095 kb on - strand, within BWI76_RS21210 at 4441.128 kb on - strand, within BWI76_RS21210 at 4441.217 kb on - strand, within BWI76_RS21210 at 4441.247 kb on + strand, within BWI76_RS21210 at 4441.475 kb on + strand, within BWI76_RS21210 at 4441.509 kb on + strand, within BWI76_RS21210 at 4441.845 kb on + strand, within BWI76_RS21210 at 4441.871 kb on + strand, within BWI76_RS21210 at 4441.937 kb on - strand, within BWI76_RS21210 at 4441.990 kb on + strand, within BWI76_RS21210 at 4442.250 kb on + strand, within BWI76_RS21210 at 4442.506 kb on - strand, within BWI76_RS21210 at 4442.555 kb on - strand, within BWI76_RS21210 at 4442.768 kb on + strand, within BWI76_RS21210 at 4442.889 kb on + strand, within BWI76_RS21210 at 4442.934 kb on - strand, within BWI76_RS21210 at 4443.262 kb on + strand, within BWI76_RS21210 at 4443.634 kb on + strand at 4444.154 kb on - strand, within BWI76_RS21215 at 4444.247 kb on + strand, within BWI76_RS21215 at 4444.255 kb on - strand, within BWI76_RS21215 at 4444.411 kb on - strand, within BWI76_RS21215 at 4444.755 kb on + strand, within BWI76_RS21215
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM remove 4,439,577 + BWI76_RS21205 0.45 +0.5 4,439,708 - BWI76_RS21205 0.54 -0.5 4,439,923 + BWI76_RS21205 0.69 +0.6 4,440,096 + BWI76_RS21205 0.81 +0.1 4,440,208 - BWI76_RS21205 0.88 +0.2 4,440,212 + BWI76_RS21205 0.89 +0.1 4,440,330 + +0.2 4,440,429 - -0.5 4,440,441 + +0.8 4,440,484 - +0.1 4,440,913 + BWI76_RS21210 0.13 +0.0 4,440,921 - BWI76_RS21210 0.13 +0.2 4,440,975 - BWI76_RS21210 0.15 +1.2 4,441,095 - BWI76_RS21210 0.19 +0.3 4,441,128 - BWI76_RS21210 0.20 +0.2 4,441,217 - BWI76_RS21210 0.22 +0.3 4,441,247 + BWI76_RS21210 0.23 +0.4 4,441,475 + BWI76_RS21210 0.30 +0.1 4,441,509 + BWI76_RS21210 0.31 +0.2 4,441,845 + BWI76_RS21210 0.41 +0.9 4,441,871 + BWI76_RS21210 0.42 +1.1 4,441,937 - BWI76_RS21210 0.44 +0.6 4,441,990 + BWI76_RS21210 0.46 +1.4 4,442,250 + BWI76_RS21210 0.54 +0.2 4,442,506 - BWI76_RS21210 0.62 +1.7 4,442,555 - BWI76_RS21210 0.63 +0.9 4,442,768 + BWI76_RS21210 0.70 +0.8 4,442,889 + BWI76_RS21210 0.73 -0.5 4,442,934 - BWI76_RS21210 0.75 +0.4 4,443,262 + BWI76_RS21210 0.85 +1.2 4,443,634 + -2.4 4,444,154 - BWI76_RS21215 0.23 +1.0 4,444,247 + BWI76_RS21215 0.31 -1.0 4,444,255 - BWI76_RS21215 0.32 -3.1 4,444,411 - BWI76_RS21215 0.45 -0.7 4,444,755 + BWI76_RS21215 0.74 -0.2
Or see this region's nucleotide sequence