Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001119

Experiment: Plant outgrowth control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant outgrowth control
1,242,155	+				-0.2
1,242,155	+				+0.9
1,242,155	+				-0.2
1,242,156	-				+1.0
1,242,156	-				+0.0
1,242,203	-				+1.5
1,242,203	-				+0.2
1,242,276	+				-0.0
1,242,276	+				-2.3
1,242,276	+				-0.3
1,242,277	-				-0.1
1,242,279	+				+2.3
1,242,279	+				+0.0
1,242,279	+				-0.2
1,242,279	+				-0.5
1,242,279	+				+0.9
1,242,279	+				-0.5
1,242,279	+				+1.5
1,242,279	+				-0.2
1,242,279	+				+0.0
1,242,279	+				+0.3
1,242,279	+				-1.0
1,242,279	+				-0.0
1,242,279	+				-1.5
1,242,279	+				+0.2
1,242,279	+				+1.0
1,242,280	-				-0.4
1,242,280	-				-0.6
1,242,280	-				+0.0
1,242,280	-				+0.0
1,242,280	-				-0.6
1,242,280	-				-1.2
1,242,280	-				+0.1
1,242,280	-				-1.4
1,242,384	+				-0.7
1,242,384	+				+1.6
1,242,411	+				+0.1
1,242,411	+				-0.7
1,242,456	-				+0.6
1,242,456	-				-2.0
1,242,458	+				-2.7
1,242,458	+				+0.8
1,242,458	+				+0.4
1,242,459	-				-1.9
1,242,459	-				+0.2
1,242,502	+				+1.0
1,242,502	+				-0.3
1,242,502	+				-2.2
1,242,502	+				-1.8
1,242,502	+				-1.8
1,242,502	+				-0.3
1,242,502	+				-2.0
1,242,502	+				+0.8
1,242,502	+				-2.3
1,242,502	+				+1.2
1,242,502	+				+1.6
1,242,502	+				-1.3
1,242,502	+				+0.4
1,242,502	+				+1.0
1,242,502	+				-0.2
1,242,502	+				-0.4
1,242,503	-				-0.0
1,242,503	-				-0.6
1,242,503	-				-0.0
1,242,503	-				-0.8
1,242,503	-				+4.8
1,242,503	-				-1.9
1,242,503	-				-0.6
1,242,503	-				-1.4
1,242,503	-				-1.2
1,242,503	-				+1.6
1,242,503	-				-0.7
1,242,503	-				-1.2
1,242,503	-				-0.0
1,242,503	-				-2.2
1,242,503	-				-1.5
1,242,503	-				-1.0
1,242,554	+				+0.6
1,242,555	-				+0.1
1,242,555	-				-0.1
1,242,555	-				-0.2
1,242,670	+		ABIE53_001118	0.28	-0.2
1,242,671	-		ABIE53_001118	0.28	-2.0
1,242,686	+		ABIE53_001118	0.32	-2.1
1,242,933	-				-1.7
1,242,998	-				-0.4
1,243,016	+				+1.4
1,243,016	+				-1.3
1,243,016	+				+0.5
1,243,016	+				+0.3
1,243,016	+				+0.2
1,243,017	-				-0.7
1,243,017	-				+0.6
1,243,017	-				+0.3
1,243,017	-				+1.0
1,243,038	+				+2.6
1,243,038	+				-0.6
1,243,038	+				-0.2
1,243,038	+				+0.6
1,243,038	+				+0.6
1,243,039	-				-1.1
1,243,039	-				-0.4
1,243,039	-				-0.4
1,243,039	-				+1.0
1,243,043	+				-2.4
1,243,044	-				-0.8
1,243,044	-				+3.1
1,243,121	+				-0.8
1,243,121	+				+0.3
1,243,121	+				-0.1
1,243,121	+				-0.2
1,243,121	+				+2.3
1,243,121	+				+3.3
1,243,121	+				-0.3
1,243,121	+				-0.2
1,243,122	-				-1.6
1,243,122	-				-1.6
1,243,122	-				-0.7
1,243,136	+				+1.3
1,243,136	+				+0.6
1,243,136	+				-1.4
1,243,136	+				-1.0
1,243,136	+				+0.5
1,243,136	+				-1.5
1,243,136	+				+0.2
1,243,136	+				+1.2
1,243,136	+				-0.6
1,243,136	+				+2.6
1,243,136	+				+0.7
1,243,136	+				-0.2
1,243,136	+				-0.4
1,243,136	+				+0.0
1,243,136	+				+1.0
1,243,136	+				+0.4
1,243,136	+				+0.5
1,243,136	+				+1.0
1,243,136	+				+1.6
1,243,136	+				-3.1
1,243,136	+				-2.0
1,243,137	-				-1.0
1,243,137	-				-1.2
1,243,137	-				-0.6
1,243,137	-				-1.6
1,243,137	-				+1.2
1,243,137	-				+2.6
1,243,137	-				+0.3
1,243,137	-				-0.8
1,243,137	-				-0.4
1,243,137	-				-0.3
1,243,137	-				-2.4
1,243,137	-				-1.0
1,243,137	-				-0.3
1,243,137	-				-0.3
1,243,137	-				-0.4
1,243,137	-				+0.1
1,243,171	-				-1.0
1,243,171	-				+2.6
1,243,308	+		ABIE53_001119	0.19	+1.3
1,243,308	+		ABIE53_001119	0.19	-0.6
1,243,409	+		ABIE53_001119	0.31	-0.7
1,243,409	+		ABIE53_001119	0.31	-0.2
1,243,409	+		ABIE53_001119	0.31	+3.2
1,243,409	+		ABIE53_001119	0.31	-1.3
1,243,409	+		ABIE53_001119	0.31	-2.0
1,243,409	+		ABIE53_001119	0.31	+1.0
1,243,410	-		ABIE53_001119	0.31	-0.9
1,243,410	-		ABIE53_001119	0.31	+1.0
1,243,410	-		ABIE53_001119	0.31	-2.3
1,243,410	-		ABIE53_001119	0.31	-1.9
1,243,410	-		ABIE53_001119	0.31	-1.0
1,243,410	-		ABIE53_001119	0.31	+0.6
1,243,410	-		ABIE53_001119	0.31	+2.4
1,243,410	-		ABIE53_001119	0.31	+2.1
1,243,494	+		ABIE53_001119	0.41	+2.9
1,243,494	+		ABIE53_001119	0.41	-0.7
1,243,494	+		ABIE53_001119	0.41	+0.5
1,243,494	+		ABIE53_001119	0.41	+2.6
1,243,494	+		ABIE53_001119	0.41	-0.1
1,243,495	-		ABIE53_001119	0.41	+0.1
1,243,495	-		ABIE53_001119	0.41	+2.0
1,243,495	-		ABIE53_001119	0.41	-0.2
1,243,495	-		ABIE53_001119	0.41	+1.0
1,243,553	+		ABIE53_001119	0.47	+0.6
1,243,553	+		ABIE53_001119	0.47	+0.6
1,243,553	+		ABIE53_001119	0.47	+0.1
1,243,554	-		ABIE53_001119	0.48	-2.0
1,243,554	-		ABIE53_001119	0.48	+1.1
1,243,554	-		ABIE53_001119	0.48	+1.1
1,243,554	-		ABIE53_001119	0.48	+1.6
1,243,554	-		ABIE53_001119	0.48	+2.6
1,243,554	-		ABIE53_001119	0.48	+0.0
1,243,554	-		ABIE53_001119	0.48	-0.7
1,243,589	+		ABIE53_001119	0.52	+0.6
1,243,590	-		ABIE53_001119	0.52	+2.6
1,243,628	+		ABIE53_001119	0.56	-0.1
1,243,629	-		ABIE53_001119	0.56	+2.6
1,243,629	-		ABIE53_001119	0.56	-0.2
1,243,629	-		ABIE53_001119	0.56	-0.7
1,243,631	+		ABIE53_001119	0.56	-2.2
1,243,631	+		ABIE53_001119	0.56	-0.7
1,243,631	+		ABIE53_001119	0.56	-0.4
1,243,631	+		ABIE53_001119	0.56	+2.6
1,243,631	+		ABIE53_001119	0.56	+0.3
1,243,631	+		ABIE53_001119	0.56	-0.8
1,243,631	+		ABIE53_001119	0.56	-0.0
1,243,631	+		ABIE53_001119	0.56	+1.6
1,243,631	+		ABIE53_001119	0.56	-0.2
1,243,631	+		ABIE53_001119	0.56	+1.0
1,243,631	+		ABIE53_001119	0.56	-1.0
1,243,631	+		ABIE53_001119	0.56	-0.7
1,243,631	+		ABIE53_001119	0.56	-1.1
1,243,631	+		ABIE53_001119	0.56	-1.8
1,243,632	-		ABIE53_001119	0.56	-0.2
1,243,632	-		ABIE53_001119	0.56	-1.6
1,243,632	-		ABIE53_001119	0.56	-0.4
1,243,632	-		ABIE53_001119	0.56	-1.1
1,243,632	-		ABIE53_001119	0.56	+2.6
1,243,632	-		ABIE53_001119	0.56	-0.4
1,243,632	-		ABIE53_001119	0.56	-2.9
1,243,632	-		ABIE53_001119	0.56	-1.4
1,243,632	-		ABIE53_001119	0.56	-0.7
1,243,632	-		ABIE53_001119	0.56	-1.1
1,243,632	-		ABIE53_001119	0.56	+0.3
1,243,632	-		ABIE53_001119	0.56	+1.5
1,243,632	-		ABIE53_001119	0.56	-1.4
1,243,991	+				-0.8
1,243,991	+				+1.0
1,243,991	+				-1.0
1,243,991	+				-0.6
1,243,991	+				-2.2
1,243,991	+				-2.2
1,243,991	+				+2.6
1,243,992	-				+0.2
1,243,992	-				+1.2
1,243,992	-				-1.3
1,243,992	-				-2.1
1,244,026	-				-2.5
1,244,115	+		ABIE53_001120	0.15	-2.9
1,244,115	+		ABIE53_001120	0.15	+1.0
1,244,115	+		ABIE53_001120	0.15	-1.9
1,244,115	+		ABIE53_001120	0.15	+0.4
1,244,115	+		ABIE53_001120	0.15	-2.3
1,244,116	-		ABIE53_001120	0.15	-0.2
1,244,116	-		ABIE53_001120	0.15	+3.9
1,244,116	-		ABIE53_001120	0.15	-0.4
1,244,116	-		ABIE53_001120	0.15	-2.3
1,244,116	-		ABIE53_001120	0.15	-0.6
1,244,116	-		ABIE53_001120	0.15	-1.3
1,244,116	-		ABIE53_001120	0.15	-1.1
1,244,116	-		ABIE53_001120	0.15	-0.5
1,244,116	-		ABIE53_001120	0.15	+0.3
1,244,116	-		ABIE53_001120	0.15	-1.4
1,244,118	+		ABIE53_001120	0.16	-1.7
1,244,118	+		ABIE53_001120	0.16	-1.9
1,244,118	+		ABIE53_001120	0.16	-1.4
1,244,118	+		ABIE53_001120	0.16	+1.6
1,244,118	+		ABIE53_001120	0.16	+0.3
1,244,118	+		ABIE53_001120	0.16	-0.6
1,244,118	+		ABIE53_001120	0.16	+0.9
1,244,118	+		ABIE53_001120	0.16	-0.1
1,244,118	+		ABIE53_001120	0.16	+0.3
1,244,118	+		ABIE53_001120	0.16	+1.9
1,244,118	+		ABIE53_001120	0.16	-1.0
1,244,118	+		ABIE53_001120	0.16	+0.7
1,244,119	-		ABIE53_001120	0.16	-1.3
1,244,119	-		ABIE53_001120	0.16	-2.1
1,244,119	-		ABIE53_001120	0.16	+0.1
1,244,119	-		ABIE53_001120	0.16	+0.3
1,244,119	-		ABIE53_001120	0.16	+0.3
1,244,119	-		ABIE53_001120	0.16	+0.6
1,244,119	-		ABIE53_001120	0.16	-0.9
1,244,119	-		ABIE53_001120	0.16	-0.6
1,244,119	-		ABIE53_001120	0.16	+1.4
1,244,119	-		ABIE53_001120	0.16	-1.4
1,244,195	+		ABIE53_001120	0.35	-0.6
1,244,195	+		ABIE53_001120	0.35	-1.1
1,244,195	+		ABIE53_001120	0.35	+1.2
1,244,196	-		ABIE53_001120	0.35	+1.8
1,244,196	-		ABIE53_001120	0.35	-1.9
1,244,196	-		ABIE53_001120	0.35	-0.4
1,244,196	-		ABIE53_001120	0.35	+0.0
1,244,357	+		ABIE53_001120	0.74	-0.1
1,244,357	+		ABIE53_001120	0.74	-0.7
1,244,358	-		ABIE53_001120	0.75	-0.4
1,244,358	-		ABIE53_001120	0.75	-2.0
1,244,358	-		ABIE53_001120	0.75	-0.4
1,244,391	+		ABIE53_001120	0.83	+1.8
1,244,391	+		ABIE53_001120	0.83	-1.6
1,244,391	+		ABIE53_001120	0.83	-0.6
1,244,392	-		ABIE53_001120	0.83	-2.4
1,244,392	-		ABIE53_001120	0.83	-0.1
1,244,392	-		ABIE53_001120	0.83	-0.6
1,244,392	-		ABIE53_001120	0.83	-0.2
1,244,394	+		ABIE53_001120	0.83	-1.0
1,244,395	-		ABIE53_001120	0.84	-0.6
1,244,459	+				-0.4
1,244,459	+				-0.4
1,244,460	-				-1.6
1,244,465	+				-1.3
1,244,465	+				+0.1
1,244,465	+				-1.2
1,244,465	+				+0.8
1,244,466	-				-0.2
1,244,466	-				-1.7
1,244,495	-				-1.8
1,244,514	+				+0.3
1,244,515	-				+0.5
1,244,515	-				+3.4
1,244,524	+				-0.4
1,244,574	+				-0.6
1,244,574	+				+0.7
1,244,574	+				-1.9
1,244,575	-				+0.1
1,244,595	-				+0.6
1,244,622	+				+0.0
1,244,622	+				+0.6
1,244,622	+				-0.1
1,244,622	+				+0.5
1,244,622	+				-1.5
1,244,622	+				+0.2
1,244,622	+				-0.4
1,244,622	+				-1.0
1,244,623	-				-0.6
1,244,623	-				+0.8
1,244,623	-				-3.2
1,244,623	-				+0.7
1,244,626	+				-0.6
1,244,626	+				+0.9
1,244,626	+				+1.6
1,244,626	+				-0.2
1,244,626	+				-0.4
1,244,626	+				-1.3
1,244,626	+				-0.2
1,244,626	+				+0.1
1,244,626	+				+1.6
1,244,627	-				-1.7
1,244,627	-				-1.8
1,244,627	-				-2.7
1,244,627	-				-0.1
1,244,627	-				+2.6
1,244,627	-				-0.4
1,244,634	+				-0.1
1,244,634	+				+0.0
1,244,634	+				-0.3
1,244,634	+				+0.2
1,244,635	-				-0.8
1,244,745	+				+3.0
1,244,745	+				+0.4
1,244,745	+				-1.2
1,244,745	+				-0.3
1,244,745	+				+0.8
1,244,747	+				-0.8
1,244,747	+				-0.3
1,244,747	+				-1.4
1,244,751	+				-1.6
1,244,751	+				+1.0
1,244,774	+				+0.1
1,244,774	+				+0.7