Experiment: Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05575 and BWI76_RS05580 overlap by 4 nucleotides BWI76_RS05580 and BWI76_RS05585 overlap by 20 nucleotides
BWI76_RS05575: BWI76_RS05575 - group 1 glycosyl transferase, at 1,166,999 to 1,168,114
_RS05575
BWI76_RS05580: BWI76_RS05580 - group 1 glycosyl transferase, at 1,168,111 to 1,169,325
_RS05580
BWI76_RS05585: BWI76_RS05585 - family 2 glycosyl transferase, at 1,169,306 to 1,170,331
_RS05585
BWI76_RS05590: BWI76_RS05590 - hypothetical protein, at 1,170,324 to 1,171,706
_RS05590
Position (kb)
1168
1169
1170 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1167.207 kb on - strand, within BWI76_RS05575 at 1167.224 kb on + strand, within BWI76_RS05575 at 1167.225 kb on + strand, within BWI76_RS05575 at 1167.250 kb on - strand, within BWI76_RS05575 at 1167.316 kb on + strand, within BWI76_RS05575 at 1167.591 kb on + strand, within BWI76_RS05575 at 1167.599 kb on - strand, within BWI76_RS05575 at 1167.814 kb on + strand, within BWI76_RS05575 at 1167.814 kb on + strand, within BWI76_RS05575 at 1167.819 kb on + strand, within BWI76_RS05575 at 1167.822 kb on - strand, within BWI76_RS05575 at 1167.952 kb on - strand, within BWI76_RS05575 at 1168.096 kb on + strand at 1168.096 kb on - strand at 1168.109 kb on - strand at 1168.250 kb on + strand, within BWI76_RS05580 at 1168.425 kb on - strand, within BWI76_RS05580 at 1168.549 kb on - strand, within BWI76_RS05580 at 1168.808 kb on + strand, within BWI76_RS05580 at 1168.918 kb on + strand, within BWI76_RS05580 at 1168.978 kb on + strand, within BWI76_RS05580 at 1168.998 kb on + strand, within BWI76_RS05580 at 1169.078 kb on + strand, within BWI76_RS05580 at 1169.114 kb on + strand, within BWI76_RS05580 at 1169.122 kb on - strand, within BWI76_RS05580 at 1169.151 kb on + strand, within BWI76_RS05580 at 1169.151 kb on + strand, within BWI76_RS05580 at 1169.159 kb on - strand, within BWI76_RS05580 at 1169.180 kb on - strand, within BWI76_RS05580 at 1169.188 kb on + strand at 1169.226 kb on + strand at 1169.234 kb on - strand at 1169.234 kb on - strand at 1169.235 kb on - strand at 1169.235 kb on - strand at 1169.239 kb on + strand at 1169.355 kb on - strand at 1169.356 kb on - strand at 1169.364 kb on - strand at 1169.374 kb on - strand at 1169.393 kb on + strand at 1169.395 kb on + strand at 1169.399 kb on - strand at 1169.401 kb on - strand at 1169.401 kb on - strand at 1169.401 kb on - strand at 1169.410 kb on - strand, within BWI76_RS05585 at 1169.416 kb on - strand, within BWI76_RS05585 at 1169.416 kb on - strand, within BWI76_RS05585 at 1169.416 kb on - strand, within BWI76_RS05585 at 1169.416 kb on - strand, within BWI76_RS05585 at 1169.416 kb on - strand, within BWI76_RS05585 at 1169.447 kb on + strand, within BWI76_RS05585 at 1169.454 kb on - strand, within BWI76_RS05585 at 1169.455 kb on - strand, within BWI76_RS05585 at 1169.455 kb on - strand, within BWI76_RS05585 at 1169.490 kb on - strand, within BWI76_RS05585 at 1169.505 kb on + strand, within BWI76_RS05585 at 1169.568 kb on + strand, within BWI76_RS05585 at 1169.593 kb on - strand, within BWI76_RS05585 at 1169.632 kb on + strand, within BWI76_RS05585 at 1169.653 kb on + strand, within BWI76_RS05585 at 1169.713 kb on + strand, within BWI76_RS05585 at 1169.726 kb on - strand, within BWI76_RS05585 at 1169.800 kb on - strand, within BWI76_RS05585 at 1169.803 kb on + strand, within BWI76_RS05585 at 1169.811 kb on - strand, within BWI76_RS05585 at 1169.826 kb on - strand, within BWI76_RS05585 at 1169.826 kb on - strand, within BWI76_RS05585 at 1169.826 kb on - strand, within BWI76_RS05585 at 1169.861 kb on + strand, within BWI76_RS05585 at 1169.892 kb on + strand, within BWI76_RS05585 at 1169.900 kb on - strand, within BWI76_RS05585 at 1169.963 kb on - strand, within BWI76_RS05585 at 1170.022 kb on - strand, within BWI76_RS05585 at 1170.109 kb on + strand, within BWI76_RS05585 at 1170.228 kb on + strand, within BWI76_RS05585 at 1170.228 kb on + strand, within BWI76_RS05585 at 1170.236 kb on - strand at 1170.275 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM remove 1,167,207 - BWI76_RS05575 0.19 +0.4 1,167,224 + BWI76_RS05575 0.20 -0.2 1,167,225 + BWI76_RS05575 0.20 -0.5 1,167,250 - BWI76_RS05575 0.22 +0.3 1,167,316 + BWI76_RS05575 0.28 +0.8 1,167,591 + BWI76_RS05575 0.53 +1.9 1,167,599 - BWI76_RS05575 0.54 +0.5 1,167,814 + BWI76_RS05575 0.73 -0.1 1,167,814 + BWI76_RS05575 0.73 +0.4 1,167,819 + BWI76_RS05575 0.73 -0.9 1,167,822 - BWI76_RS05575 0.74 -0.5 1,167,952 - BWI76_RS05575 0.85 +0.7 1,168,096 + +0.2 1,168,096 - -0.3 1,168,109 - +0.2 1,168,250 + BWI76_RS05580 0.11 +0.4 1,168,425 - BWI76_RS05580 0.26 +0.4 1,168,549 - BWI76_RS05580 0.36 +0.3 1,168,808 + BWI76_RS05580 0.57 +0.9 1,168,918 + BWI76_RS05580 0.66 +1.7 1,168,978 + BWI76_RS05580 0.71 +0.5 1,168,998 + BWI76_RS05580 0.73 +0.6 1,169,078 + BWI76_RS05580 0.80 -0.1 1,169,114 + BWI76_RS05580 0.83 +0.2 1,169,122 - BWI76_RS05580 0.83 +0.5 1,169,151 + BWI76_RS05580 0.86 +0.4 1,169,151 + BWI76_RS05580 0.86 -0.3 1,169,159 - BWI76_RS05580 0.86 +1.3 1,169,180 - BWI76_RS05580 0.88 -0.1 1,169,188 + +1.9 1,169,226 + -1.9 1,169,234 - -0.6 1,169,234 - -0.6 1,169,235 - -2.4 1,169,235 - +0.3 1,169,239 + +2.1 1,169,355 - +0.3 1,169,356 - +0.6 1,169,364 - +0.9 1,169,374 - +0.8 1,169,393 + -0.8 1,169,395 + -1.2 1,169,399 - +0.7 1,169,401 - -0.9 1,169,401 - +0.8 1,169,401 - +0.0 1,169,410 - BWI76_RS05585 0.10 +0.1 1,169,416 - BWI76_RS05585 0.11 -0.9 1,169,416 - BWI76_RS05585 0.11 +0.5 1,169,416 - BWI76_RS05585 0.11 +0.1 1,169,416 - BWI76_RS05585 0.11 +1.0 1,169,416 - BWI76_RS05585 0.11 -0.1 1,169,447 + BWI76_RS05585 0.14 +0.3 1,169,454 - BWI76_RS05585 0.14 -0.6 1,169,455 - BWI76_RS05585 0.15 -0.6 1,169,455 - BWI76_RS05585 0.15 +1.1 1,169,490 - BWI76_RS05585 0.18 -0.6 1,169,505 + BWI76_RS05585 0.19 -0.9 1,169,568 + BWI76_RS05585 0.26 +1.2 1,169,593 - BWI76_RS05585 0.28 -2.1 1,169,632 + BWI76_RS05585 0.32 +0.0 1,169,653 + BWI76_RS05585 0.34 +0.6 1,169,713 + BWI76_RS05585 0.40 +0.2 1,169,726 - BWI76_RS05585 0.41 -0.1 1,169,800 - BWI76_RS05585 0.48 +0.3 1,169,803 + BWI76_RS05585 0.48 -0.7 1,169,811 - BWI76_RS05585 0.49 -0.3 1,169,826 - BWI76_RS05585 0.51 +0.9 1,169,826 - BWI76_RS05585 0.51 +0.1 1,169,826 - BWI76_RS05585 0.51 -0.1 1,169,861 + BWI76_RS05585 0.54 -0.9 1,169,892 + BWI76_RS05585 0.57 +0.8 1,169,900 - BWI76_RS05585 0.58 -1.4 1,169,963 - BWI76_RS05585 0.64 -0.3 1,170,022 - BWI76_RS05585 0.70 -1.4 1,170,109 + BWI76_RS05585 0.78 -0.6 1,170,228 + BWI76_RS05585 0.90 -0.0 1,170,228 + BWI76_RS05585 0.90 +1.2 1,170,236 - +0.5 1,170,275 + -1.3
Or see this region's nucleotide sequence