Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26000 and BWI76_RS26005 are separated by 89 nucleotides BWI76_RS26005 and BWI76_RS26010 are separated by 31 nucleotides BWI76_RS26010 and BWI76_RS26015 overlap by 11 nucleotides BWI76_RS26015 and BWI76_RS26020 are separated by 108 nucleotides
BWI76_RS26000: BWI76_RS26000 - aspartate aminotransferase family protein, at 5,373,847 to 5,375,067
_RS26000
BWI76_RS26005: BWI76_RS26005 - glutamine amidotransferase, at 5,375,157 to 5,375,720
_RS26005
BWI76_RS26010: BWI76_RS26010 - cell filamentation protein Fic, at 5,375,752 to 5,376,354
_RS26010
BWI76_RS26015: BWI76_RS26015 - DUF2559 domain-containing protein, at 5,376,344 to 5,376,511
_RS26015
BWI76_RS26020: BWI76_RS26020 - peptidylprolyl isomerase A, at 5,376,620 to 5,377,189
_RS26020
Position (kb) 5375
5376
5377 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2 at 5374.823 kb on - strand, within BWI76_RS26000 at 5374.970 kb on + strand at 5374.978 kb on - strand at 5375.294 kb on + strand, within BWI76_RS26005 at 5375.367 kb on - strand, within BWI76_RS26005 at 5375.781 kb on - strand at 5375.781 kb on - strand at 5375.850 kb on - strand, within BWI76_RS26010 at 5375.870 kb on - strand, within BWI76_RS26010 at 5375.982 kb on - strand, within BWI76_RS26010 at 5376.018 kb on + strand, within BWI76_RS26010 at 5376.137 kb on - strand, within BWI76_RS26010 at 5376.275 kb on + strand, within BWI76_RS26010 at 5376.299 kb on + strand at 5376.307 kb on - strand at 5376.388 kb on - strand, within BWI76_RS26015 at 5376.602 kb on - strand at 5376.626 kb on - strand at 5376.662 kb on - strand at 5376.679 kb on + strand, within BWI76_RS26020 at 5376.730 kb on - strand, within BWI76_RS26020 at 5376.751 kb on - strand, within BWI76_RS26020 at 5376.825 kb on - strand, within BWI76_RS26020 at 5376.830 kb on + strand, within BWI76_RS26020 at 5376.830 kb on + strand, within BWI76_RS26020 at 5376.830 kb on + strand, within BWI76_RS26020 at 5377.089 kb on - strand, within BWI76_RS26020 at 5377.233 kb on - strand at 5377.282 kb on + strand at 5377.291 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 5,374,823 - BWI76_RS26000 0.80 -2.9 5,374,970 + -3.6 5,374,978 - -5.8 5,375,294 + BWI76_RS26005 0.24 +1.0 5,375,367 - BWI76_RS26005 0.37 +0.7 5,375,781 - -2.1 5,375,781 - -0.4 5,375,850 - BWI76_RS26010 0.16 +1.4 5,375,870 - BWI76_RS26010 0.20 +0.2 5,375,982 - BWI76_RS26010 0.38 +0.7 5,376,018 + BWI76_RS26010 0.44 +0.4 5,376,137 - BWI76_RS26010 0.64 -0.0 5,376,275 + BWI76_RS26010 0.87 +2.6 5,376,299 + -0.1 5,376,307 - +0.7 5,376,388 - BWI76_RS26015 0.26 +0.3 5,376,602 - -0.3 5,376,626 - -0.4 5,376,662 - +1.2 5,376,679 + BWI76_RS26020 0.10 -1.0 5,376,730 - BWI76_RS26020 0.19 +1.6 5,376,751 - BWI76_RS26020 0.23 -0.8 5,376,825 - BWI76_RS26020 0.36 -0.5 5,376,830 + BWI76_RS26020 0.37 +0.3 5,376,830 + BWI76_RS26020 0.37 +0.3 5,376,830 + BWI76_RS26020 0.37 +0.4 5,377,089 - BWI76_RS26020 0.82 +1.0 5,377,233 - -1.3 5,377,282 + +0.9 5,377,291 - +0.4
Or see this region's nucleotide sequence