Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20810 and BWI76_RS20815 overlap by 4 nucleotides BWI76_RS20815 and BWI76_RS20820 overlap by 23 nucleotides BWI76_RS20820 and BWI76_RS20825 are separated by 12 nucleotides BWI76_RS20825 and BWI76_RS20830 are separated by 159 nucleotides
BWI76_RS20810: BWI76_RS20810 - ethanolamine utilization cobalamin adenosyltransferase, at 4,349,057 to 4,349,860
_RS20810
BWI76_RS20815: BWI76_RS20815 - ethanolamine utilization protein EutQ, at 4,349,857 to 4,350,549
_RS20815
BWI76_RS20820: BWI76_RS20820 - ethanolamine utilization protein EutP, at 4,350,527 to 4,351,006
_RS20820
BWI76_RS20825: BWI76_RS20825 - carboxysome shell protein, at 4,351,019 to 4,351,354
_RS20825
BWI76_RS20830: BWI76_RS20830 - bifunctional malic enzyme oxidoreductase/phosphotransacetylase, at 4,351,514 to 4,353,793
_RS20830
Position (kb) 4350
4351
4352 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 4349.958 kb on - strand, within BWI76_RS20815 at 4349.963 kb on + strand, within BWI76_RS20815 at 4350.030 kb on + strand, within BWI76_RS20815 at 4350.040 kb on - strand, within BWI76_RS20815 at 4350.080 kb on - strand, within BWI76_RS20815 at 4350.095 kb on + strand, within BWI76_RS20815 at 4350.141 kb on + strand, within BWI76_RS20815 at 4350.197 kb on - strand, within BWI76_RS20815 at 4350.216 kb on + strand, within BWI76_RS20815 at 4350.224 kb on - strand, within BWI76_RS20815 at 4350.314 kb on + strand, within BWI76_RS20815 at 4350.351 kb on + strand, within BWI76_RS20815 at 4350.606 kb on - strand, within BWI76_RS20820 at 4350.609 kb on + strand, within BWI76_RS20820 at 4350.657 kb on + strand, within BWI76_RS20820 at 4350.665 kb on - strand, within BWI76_RS20820 at 4350.700 kb on + strand, within BWI76_RS20820 at 4350.757 kb on - strand, within BWI76_RS20820 at 4350.761 kb on + strand, within BWI76_RS20820 at 4350.763 kb on - strand, within BWI76_RS20820 at 4350.771 kb on - strand, within BWI76_RS20820 at 4350.778 kb on - strand, within BWI76_RS20820 at 4350.795 kb on + strand, within BWI76_RS20820 at 4350.795 kb on + strand, within BWI76_RS20820 at 4350.796 kb on + strand, within BWI76_RS20820 at 4350.803 kb on - strand, within BWI76_RS20820 at 4350.813 kb on + strand, within BWI76_RS20820 at 4350.813 kb on + strand, within BWI76_RS20820 at 4350.850 kb on - strand, within BWI76_RS20820 at 4350.850 kb on - strand, within BWI76_RS20820 at 4350.863 kb on + strand, within BWI76_RS20820 at 4350.886 kb on - strand, within BWI76_RS20820 at 4350.948 kb on + strand, within BWI76_RS20820 at 4350.956 kb on - strand, within BWI76_RS20820 at 4351.022 kb on + strand at 4351.023 kb on - strand at 4351.030 kb on - strand at 4351.050 kb on - strand at 4351.050 kb on - strand at 4351.050 kb on - strand at 4351.050 kb on - strand at 4351.077 kb on + strand, within BWI76_RS20825 at 4351.077 kb on + strand at 4351.077 kb on + strand, within BWI76_RS20825 at 4351.077 kb on + strand, within BWI76_RS20825 at 4351.077 kb on + strand, within BWI76_RS20825 at 4351.077 kb on + strand, within BWI76_RS20825 at 4351.077 kb on + strand, within BWI76_RS20825 at 4351.077 kb on + strand, within BWI76_RS20825 at 4351.077 kb on - strand, within BWI76_RS20825 at 4351.077 kb on - strand, within BWI76_RS20825 at 4351.077 kb on - strand, within BWI76_RS20825 at 4351.077 kb on - strand, within BWI76_RS20825 at 4351.077 kb on - strand at 4351.077 kb on - strand, within BWI76_RS20825 at 4351.082 kb on + strand, within BWI76_RS20825 at 4351.085 kb on - strand, within BWI76_RS20825 at 4351.085 kb on - strand, within BWI76_RS20825 at 4351.085 kb on - strand, within BWI76_RS20825 at 4351.087 kb on - strand, within BWI76_RS20825 at 4351.091 kb on + strand, within BWI76_RS20825 at 4351.095 kb on - strand, within BWI76_RS20825 at 4351.099 kb on - strand, within BWI76_RS20825 at 4351.221 kb on - strand, within BWI76_RS20825 at 4351.221 kb on - strand, within BWI76_RS20825 at 4351.283 kb on - strand, within BWI76_RS20825 at 4351.310 kb on - strand, within BWI76_RS20825 at 4351.312 kb on - strand, within BWI76_RS20825 at 4351.349 kb on + strand at 4351.356 kb on + strand at 4351.356 kb on + strand at 4351.364 kb on - strand at 4351.364 kb on - strand at 4351.364 kb on - strand at 4351.364 kb on - strand at 4351.368 kb on + strand at 4351.376 kb on - strand at 4351.376 kb on - strand at 4351.376 kb on - strand at 4351.526 kb on + strand at 4351.526 kb on + strand at 4351.529 kb on - strand at 4351.534 kb on - strand at 4351.534 kb on - strand at 4351.534 kb on - strand at 4351.539 kb on + strand at 4351.539 kb on + strand at 4351.576 kb on - strand at 4351.581 kb on - strand at 4351.593 kb on + strand at 4351.594 kb on + strand at 4351.594 kb on + strand at 4351.603 kb on - strand at 4351.603 kb on - strand at 4351.603 kb on - strand at 4351.603 kb on - strand at 4351.603 kb on - strand at 4351.604 kb on - strand at 4351.606 kb on + strand at 4351.606 kb on + strand at 4351.606 kb on + strand at 4351.613 kb on - strand at 4351.617 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on + strand at 4351.619 kb on - strand at 4351.622 kb on - strand at 4351.622 kb on - strand at 4351.622 kb on - strand at 4351.622 kb on - strand at 4351.625 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.627 kb on - strand at 4351.629 kb on + strand at 4351.630 kb on + strand at 4351.630 kb on + strand at 4351.638 kb on - strand at 4351.638 kb on - strand at 4351.638 kb on - strand at 4351.643 kb on - strand at 4351.653 kb on - strand at 4351.678 kb on - strand at 4351.720 kb on - strand at 4351.772 kb on - strand, within BWI76_RS20830 at 4351.818 kb on - strand, within BWI76_RS20830
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 4,349,958 - BWI76_RS20815 0.15 +1.8 4,349,963 + BWI76_RS20815 0.15 -0.5 4,350,030 + BWI76_RS20815 0.25 +0.3 4,350,040 - BWI76_RS20815 0.26 +2.0 4,350,080 - BWI76_RS20815 0.32 +2.9 4,350,095 + BWI76_RS20815 0.34 +2.9 4,350,141 + BWI76_RS20815 0.41 +0.1 4,350,197 - BWI76_RS20815 0.49 +2.0 4,350,216 + BWI76_RS20815 0.52 +0.7 4,350,224 - BWI76_RS20815 0.53 +0.5 4,350,314 + BWI76_RS20815 0.66 +0.1 4,350,351 + BWI76_RS20815 0.71 -0.7 4,350,606 - BWI76_RS20820 0.16 +2.3 4,350,609 + BWI76_RS20820 0.17 +0.8 4,350,657 + BWI76_RS20820 0.27 -0.8 4,350,665 - BWI76_RS20820 0.29 +5.3 4,350,700 + BWI76_RS20820 0.36 +2.2 4,350,757 - BWI76_RS20820 0.48 +2.1 4,350,761 + BWI76_RS20820 0.49 +0.3 4,350,763 - BWI76_RS20820 0.49 +2.2 4,350,771 - BWI76_RS20820 0.51 +3.9 4,350,778 - BWI76_RS20820 0.52 +1.3 4,350,795 + BWI76_RS20820 0.56 -0.8 4,350,795 + BWI76_RS20820 0.56 +0.7 4,350,796 + BWI76_RS20820 0.56 +0.6 4,350,803 - BWI76_RS20820 0.57 +2.9 4,350,813 + BWI76_RS20820 0.60 +1.0 4,350,813 + BWI76_RS20820 0.60 +2.7 4,350,850 - BWI76_RS20820 0.67 +1.0 4,350,850 - BWI76_RS20820 0.67 +2.0 4,350,863 + BWI76_RS20820 0.70 +0.5 4,350,886 - BWI76_RS20820 0.75 +1.4 4,350,948 + BWI76_RS20820 0.88 +0.0 4,350,956 - BWI76_RS20820 0.89 +0.9 4,351,022 + +0.5 4,351,023 - +1.0 4,351,030 - +0.6 4,351,050 - +1.2 4,351,050 - -0.4 4,351,050 - +2.2 4,351,050 - +2.2 4,351,077 + BWI76_RS20825 0.17 -1.0 4,351,077 + +1.0 4,351,077 + BWI76_RS20825 0.17 -1.6 4,351,077 + BWI76_RS20825 0.17 -0.2 4,351,077 + BWI76_RS20825 0.17 +0.6 4,351,077 + BWI76_RS20825 0.17 +1.0 4,351,077 + BWI76_RS20825 0.17 +0.0 4,351,077 + BWI76_RS20825 0.17 +4.2 4,351,077 - BWI76_RS20825 0.17 +0.9 4,351,077 - BWI76_RS20825 0.17 +2.6 4,351,077 - BWI76_RS20825 0.17 -1.6 4,351,077 - BWI76_RS20825 0.17 +1.2 4,351,077 - +1.0 4,351,077 - BWI76_RS20825 0.17 +2.2 4,351,082 + BWI76_RS20825 0.19 -0.8 4,351,085 - BWI76_RS20825 0.20 +1.5 4,351,085 - BWI76_RS20825 0.20 -1.0 4,351,085 - BWI76_RS20825 0.20 +0.8 4,351,087 - BWI76_RS20825 0.20 +4.3 4,351,091 + BWI76_RS20825 0.21 +1.0 4,351,095 - BWI76_RS20825 0.23 +1.2 4,351,099 - BWI76_RS20825 0.24 -1.6 4,351,221 - BWI76_RS20825 0.60 +1.0 4,351,221 - BWI76_RS20825 0.60 +1.0 4,351,283 - BWI76_RS20825 0.79 +1.2 4,351,310 - BWI76_RS20825 0.87 +0.6 4,351,312 - BWI76_RS20825 0.87 -0.0 4,351,349 + +0.8 4,351,356 + -0.2 4,351,356 + +1.1 4,351,364 - -0.8 4,351,364 - +0.8 4,351,364 - +3.4 4,351,364 - +0.8 4,351,368 + +0.4 4,351,376 - +1.1 4,351,376 - +2.7 4,351,376 - +1.6 4,351,526 + -0.7 4,351,526 + +0.8 4,351,529 - -0.2 4,351,534 - -0.1 4,351,534 - -1.1 4,351,534 - +0.8 4,351,539 + -1.0 4,351,539 + -0.5 4,351,576 - +0.3 4,351,581 - -0.3 4,351,593 + -2.3 4,351,594 + -0.0 4,351,594 + +1.0 4,351,603 - -0.7 4,351,603 - +0.1 4,351,603 - -2.4 4,351,603 - -0.3 4,351,603 - -1.0 4,351,604 - +0.6 4,351,606 + +0.2 4,351,606 + +1.0 4,351,606 + -0.7 4,351,613 - -1.2 4,351,617 + +0.6 4,351,619 + -1.6 4,351,619 + -1.1 4,351,619 + +0.8 4,351,619 + +0.3 4,351,619 + -1.8 4,351,619 + +0.3 4,351,619 + -0.6 4,351,619 + +1.1 4,351,619 + +2.3 4,351,619 + -0.5 4,351,619 + -0.9 4,351,619 + -0.7 4,351,619 + -0.4 4,351,619 + +1.2 4,351,619 + +2.6 4,351,619 + -0.7 4,351,619 + -1.5 4,351,619 + -0.0 4,351,619 + +0.1 4,351,619 + +0.1 4,351,619 + -0.5 4,351,619 - -0.2 4,351,622 - -0.6 4,351,622 - -1.3 4,351,622 - -0.6 4,351,622 - +0.4 4,351,625 - +0.8 4,351,627 - +0.2 4,351,627 - -1.0 4,351,627 - +0.6 4,351,627 - -0.7 4,351,627 - -0.2 4,351,627 - +0.3 4,351,627 - -1.4 4,351,627 - +0.9 4,351,627 - +0.1 4,351,627 - +0.3 4,351,627 - -1.3 4,351,627 - -0.8 4,351,627 - -0.1 4,351,627 - -1.3 4,351,627 - +0.4 4,351,627 - +1.7 4,351,627 - -0.2 4,351,627 - -0.2 4,351,627 - +0.4 4,351,627 - -1.0 4,351,627 - +0.4 4,351,627 - +0.3 4,351,627 - -0.1 4,351,629 + -1.0 4,351,630 + -0.2 4,351,630 + +0.4 4,351,638 - +1.1 4,351,638 - -2.5 4,351,638 - +0.6 4,351,643 - +1.0 4,351,653 - -1.3 4,351,678 - -0.1 4,351,720 - -1.8 4,351,772 - BWI76_RS20830 0.11 -1.2 4,351,818 - BWI76_RS20830 0.13 -1.2
Or see this region's nucleotide sequence