Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19560 and BWI76_RS19565 are separated by 152 nucleotides BWI76_RS19565 and BWI76_RS19570 are separated by 200 nucleotides
BWI76_RS19560: BWI76_RS19560 - beta-1,4-xylanase, at 4,089,668 to 4,090,501
_RS19560
BWI76_RS19565: BWI76_RS19565 - tRNA dihydrouridine(16) synthase DusC, at 4,090,654 to 4,091,592
_RS19565
BWI76_RS19570: BWI76_RS19570 - 3-hydroxybenzoate 6-hydroxylase, at 4,091,793 to 4,092,986
_RS19570
Position (kb)
4090
4091
4092 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4089.782 kb on + strand, within BWI76_RS19560 at 4089.866 kb on - strand, within BWI76_RS19560 at 4089.985 kb on - strand, within BWI76_RS19560 at 4090.013 kb on - strand, within BWI76_RS19560 at 4090.071 kb on - strand, within BWI76_RS19560 at 4090.120 kb on + strand, within BWI76_RS19560 at 4090.156 kb on - strand, within BWI76_RS19560 at 4090.224 kb on - strand, within BWI76_RS19560 at 4090.303 kb on + strand, within BWI76_RS19560 at 4090.432 kb on - strand at 4090.436 kb on - strand at 4090.596 kb on - strand at 4090.715 kb on + strand at 4090.723 kb on - strand at 4090.723 kb on - strand at 4090.733 kb on + strand at 4090.856 kb on - strand, within BWI76_RS19565 at 4090.858 kb on + strand, within BWI76_RS19565 at 4090.906 kb on + strand, within BWI76_RS19565 at 4091.197 kb on + strand, within BWI76_RS19565 at 4091.311 kb on - strand, within BWI76_RS19565 at 4091.436 kb on + strand, within BWI76_RS19565 at 4091.444 kb on - strand, within BWI76_RS19565 at 4091.636 kb on + strand at 4091.799 kb on - strand at 4091.872 kb on - strand at 4091.988 kb on - strand, within BWI76_RS19570 at 4091.990 kb on - strand, within BWI76_RS19570 at 4092.031 kb on + strand, within BWI76_RS19570 at 4092.062 kb on - strand, within BWI76_RS19570 at 4092.084 kb on + strand, within BWI76_RS19570 at 4092.087 kb on - strand, within BWI76_RS19570
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 4,089,782 + BWI76_RS19560 0.14 +1.0 4,089,866 - BWI76_RS19560 0.24 -3.0 4,089,985 - BWI76_RS19560 0.38 -0.3 4,090,013 - BWI76_RS19560 0.41 +2.0 4,090,071 - BWI76_RS19560 0.48 +0.4 4,090,120 + BWI76_RS19560 0.54 -1.2 4,090,156 - BWI76_RS19560 0.59 +0.0 4,090,224 - BWI76_RS19560 0.67 +0.2 4,090,303 + BWI76_RS19560 0.76 -0.3 4,090,432 - -0.5 4,090,436 - -2.0 4,090,596 - +1.1 4,090,715 + +1.4 4,090,723 - -0.1 4,090,723 - +0.4 4,090,733 + +0.9 4,090,856 - BWI76_RS19565 0.22 +0.3 4,090,858 + BWI76_RS19565 0.22 +0.5 4,090,906 + BWI76_RS19565 0.27 +0.8 4,091,197 + BWI76_RS19565 0.58 +0.5 4,091,311 - BWI76_RS19565 0.70 +1.4 4,091,436 + BWI76_RS19565 0.83 +1.2 4,091,444 - BWI76_RS19565 0.84 +1.0 4,091,636 + +0.4 4,091,799 - -0.2 4,091,872 - -1.4 4,091,988 - BWI76_RS19570 0.16 -1.0 4,091,990 - BWI76_RS19570 0.16 -0.2 4,092,031 + BWI76_RS19570 0.20 +0.6 4,092,062 - BWI76_RS19570 0.23 -1.8 4,092,084 + BWI76_RS19570 0.24 -1.0 4,092,087 - BWI76_RS19570 0.25 -1.6
Or see this region's nucleotide sequence