Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11090 and BWI76_RS11095 are separated by 210 nucleotides BWI76_RS11095 and BWI76_RS11100 are separated by 89 nucleotides BWI76_RS11100 and BWI76_RS11105 are separated by 143 nucleotides BWI76_RS11105 and BWI76_RS11110 are separated by 2 nucleotides
BWI76_RS11090: BWI76_RS11090 - beta-ketoacyl-ACP reductase, at 2,339,336 to 2,340,070
_RS11090
BWI76_RS11095: BWI76_RS11095 - acyl carrier protein, at 2,340,281 to 2,340,517
_RS11095
BWI76_RS11100: BWI76_RS11100 - beta-ketoacyl-[acyl-carrier-protein] synthase II, at 2,340,607 to 2,341,848
_RS11100
BWI76_RS11105: BWI76_RS11105 - aminodeoxychorismate lyase, at 2,341,992 to 2,342,801
_RS11105
BWI76_RS11110: BWI76_RS11110 - cell division protein YceG, at 2,342,804 to 2,343,826
_RS11110
Position (kb)
2340
2341
2342 Strain fitness (log2 ratio)
-2
-1
0
1 at 2341.302 kb on + strand, within BWI76_RS11100 at 2341.592 kb on + strand, within BWI76_RS11100 at 2341.637 kb on + strand, within BWI76_RS11100 at 2341.781 kb on + strand at 2341.842 kb on + strand at 2342.422 kb on - strand, within BWI76_RS11105 at 2342.551 kb on + strand, within BWI76_RS11105 at 2342.551 kb on + strand, within BWI76_RS11105
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 2,341,302 + BWI76_RS11100 0.56 -1.8 2,341,592 + BWI76_RS11100 0.79 -0.2 2,341,637 + BWI76_RS11100 0.83 -1.1 2,341,781 + -0.3 2,341,842 + -0.2 2,342,422 - BWI76_RS11105 0.53 +1.3 2,342,551 + BWI76_RS11105 0.69 +0.7 2,342,551 + BWI76_RS11105 0.69 +1.0
Or see this region's nucleotide sequence