Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06005 and BWI76_RS06010 are separated by 11 nucleotides BWI76_RS06010 and BWI76_RS06015 are separated by 46 nucleotides BWI76_RS06015 and BWI76_RS06020 are separated by 76 nucleotides
BWI76_RS06005: BWI76_RS06005 - ethanolamine ammonia lyase large subunit, at 1,259,737 to 1,261,125
_RS06005
BWI76_RS06010: BWI76_RS06010 - ethanolamine permease, at 1,261,137 to 1,262,516
_RS06010
BWI76_RS06015: BWI76_RS06015 - hypothetical protein, at 1,262,563 to 1,262,748
_RS06015
BWI76_RS06020: BWI76_RS06020 - glycoside hydrolase, at 1,262,825 to 1,264,207
_RS06020
Position (kb) 1261
1262
1263 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 1260.261 kb on - strand, within BWI76_RS06005 at 1260.468 kb on + strand, within BWI76_RS06005 at 1260.500 kb on - strand, within BWI76_RS06005 at 1260.517 kb on - strand, within BWI76_RS06005 at 1260.517 kb on - strand, within BWI76_RS06005 at 1260.557 kb on - strand, within BWI76_RS06005 at 1260.578 kb on + strand, within BWI76_RS06005 at 1260.662 kb on + strand, within BWI76_RS06005 at 1260.801 kb on + strand, within BWI76_RS06005 at 1260.922 kb on - strand, within BWI76_RS06005 at 1261.115 kb on + strand at 1261.663 kb on - strand, within BWI76_RS06010 at 1261.860 kb on - strand, within BWI76_RS06010 at 1261.877 kb on - strand, within BWI76_RS06010 at 1261.916 kb on + strand, within BWI76_RS06010 at 1262.066 kb on + strand, within BWI76_RS06010 at 1262.074 kb on - strand, within BWI76_RS06010 at 1262.074 kb on - strand, within BWI76_RS06010 at 1262.261 kb on + strand, within BWI76_RS06010 at 1262.261 kb on + strand, within BWI76_RS06010 at 1262.261 kb on + strand, within BWI76_RS06010 at 1262.549 kb on - strand at 1262.643 kb on + strand, within BWI76_RS06015 at 1262.646 kb on - strand, within BWI76_RS06015 at 1262.749 kb on - strand at 1262.788 kb on - strand at 1262.790 kb on + strand at 1262.871 kb on + strand at 1262.926 kb on + strand at 1262.945 kb on - strand at 1263.051 kb on + strand, within BWI76_RS06020 at 1263.088 kb on + strand, within BWI76_RS06020 at 1263.127 kb on + strand, within BWI76_RS06020 at 1263.135 kb on - strand, within BWI76_RS06020 at 1263.135 kb on - strand, within BWI76_RS06020 at 1263.135 kb on - strand, within BWI76_RS06020 at 1263.183 kb on + strand, within BWI76_RS06020 at 1263.376 kb on + strand, within BWI76_RS06020 at 1263.397 kb on - strand, within BWI76_RS06020 at 1263.408 kb on + strand, within BWI76_RS06020
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 1,260,261 - BWI76_RS06005 0.38 +0.6 1,260,468 + BWI76_RS06005 0.53 +0.1 1,260,500 - BWI76_RS06005 0.55 -0.6 1,260,517 - BWI76_RS06005 0.56 -0.5 1,260,517 - BWI76_RS06005 0.56 +0.3 1,260,557 - BWI76_RS06005 0.59 +0.5 1,260,578 + BWI76_RS06005 0.61 -0.5 1,260,662 + BWI76_RS06005 0.67 -0.7 1,260,801 + BWI76_RS06005 0.77 -0.1 1,260,922 - BWI76_RS06005 0.85 +0.3 1,261,115 + -2.5 1,261,663 - BWI76_RS06010 0.38 +0.6 1,261,860 - BWI76_RS06010 0.52 +0.1 1,261,877 - BWI76_RS06010 0.54 +0.4 1,261,916 + BWI76_RS06010 0.56 +0.1 1,262,066 + BWI76_RS06010 0.67 -0.8 1,262,074 - BWI76_RS06010 0.68 +1.4 1,262,074 - BWI76_RS06010 0.68 -0.6 1,262,261 + BWI76_RS06010 0.81 -1.1 1,262,261 + BWI76_RS06010 0.81 +0.1 1,262,261 + BWI76_RS06010 0.81 +0.2 1,262,549 - +1.2 1,262,643 + BWI76_RS06015 0.43 -0.1 1,262,646 - BWI76_RS06015 0.45 -2.8 1,262,749 - +0.9 1,262,788 - -0.3 1,262,790 + -0.1 1,262,871 + +1.0 1,262,926 + +0.1 1,262,945 - +0.1 1,263,051 + BWI76_RS06020 0.16 -1.4 1,263,088 + BWI76_RS06020 0.19 +0.2 1,263,127 + BWI76_RS06020 0.22 +2.7 1,263,135 - BWI76_RS06020 0.22 +0.5 1,263,135 - BWI76_RS06020 0.22 +0.1 1,263,135 - BWI76_RS06020 0.22 -4.2 1,263,183 + BWI76_RS06020 0.26 +0.3 1,263,376 + BWI76_RS06020 0.40 -0.5 1,263,397 - BWI76_RS06020 0.41 -0.3 1,263,408 + BWI76_RS06020 0.42 -0.6
Or see this region's nucleotide sequence