Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05495 and BWI76_RS05500 overlap by 8 nucleotides BWI76_RS05500 and BWI76_RS05505 overlap by 8 nucleotides BWI76_RS05505 and BWI76_RS05510 are separated by 6 nucleotides
BWI76_RS05495: BWI76_RS05495 - NADH:ubiquinone reductase (Na(+)-transporting) subunit B, at 1,153,181 to 1,154,419
_RS05495
BWI76_RS05500: BWI76_RS05500 - NADH:ubiquinone reductase (Na(+)-transporting) subunit C, at 1,154,412 to 1,155,206
_RS05500
BWI76_RS05505: BWI76_RS05505 - NADH:ubiquinone reductase (Na(+)-transporting) subunit D, at 1,155,199 to 1,155,837
_RS05505
BWI76_RS05510: BWI76_RS05510 - NADH:ubiquinone reductase (Na(+)-transporting) subunit E, at 1,155,844 to 1,156,440
_RS05510
Position (kb)
1154
1155
1156 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1153.491 kb on - strand, within BWI76_RS05495 at 1153.548 kb on + strand, within BWI76_RS05495 at 1153.574 kb on + strand, within BWI76_RS05495 at 1153.582 kb on - strand, within BWI76_RS05495 at 1153.665 kb on + strand, within BWI76_RS05495 at 1153.673 kb on - strand, within BWI76_RS05495 at 1153.852 kb on + strand, within BWI76_RS05495 at 1154.081 kb on + strand, within BWI76_RS05495 at 1154.702 kb on + strand, within BWI76_RS05500 at 1154.739 kb on - strand, within BWI76_RS05500 at 1154.809 kb on + strand, within BWI76_RS05500 at 1154.954 kb on + strand, within BWI76_RS05500 at 1155.068 kb on + strand, within BWI76_RS05500 at 1155.074 kb on - strand, within BWI76_RS05500 at 1155.089 kb on + strand, within BWI76_RS05500 at 1155.862 kb on - strand at 1156.033 kb on - strand, within BWI76_RS05510 at 1156.158 kb on + strand, within BWI76_RS05510 at 1156.158 kb on + strand, within BWI76_RS05510 at 1156.166 kb on - strand, within BWI76_RS05510
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 1,153,491 - BWI76_RS05495 0.25 -5.7 1,153,548 + BWI76_RS05495 0.30 -3.7 1,153,574 + BWI76_RS05495 0.32 -5.1 1,153,582 - BWI76_RS05495 0.32 -1.9 1,153,665 + BWI76_RS05495 0.39 -4.0 1,153,673 - BWI76_RS05495 0.40 -2.0 1,153,852 + BWI76_RS05495 0.54 -3.4 1,154,081 + BWI76_RS05495 0.73 -3.7 1,154,702 + BWI76_RS05500 0.36 -2.5 1,154,739 - BWI76_RS05500 0.41 -1.0 1,154,809 + BWI76_RS05500 0.50 -2.2 1,154,954 + BWI76_RS05500 0.68 -2.3 1,155,068 + BWI76_RS05500 0.83 -5.1 1,155,074 - BWI76_RS05500 0.83 -2.8 1,155,089 + BWI76_RS05500 0.85 -3.3 1,155,862 - -1.3 1,156,033 - BWI76_RS05510 0.32 -3.7 1,156,158 + BWI76_RS05510 0.53 -1.7 1,156,158 + BWI76_RS05510 0.53 -0.6 1,156,166 - BWI76_RS05510 0.54 -0.8
Or see this region's nucleotide sequence